New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3878328	70 (0.790)	5 (0.060)	5/236	NT	6.8%	coding (119/3180 nt)	mexF	multidrug RND transporter MexF
	?	NC_002947	= 3878357	69 (0.810)					coding (148/3180 nt)	mexF	multidrug RND transporter MexF

ACCGATGAACTTCTCGAAATTCTTCATTACCCGGCCGATCTTCGCCGCGGTGCTGTCGCTGGTGCTGCTGATCGCGGGTTCCATCTCGCTGTTCCAGCTGCCGATCAGCGAATACCCCGAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3878206‑3878328 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagtTGGCGCGCACCACCACGGTGGGCGGCACCACTTCGGGGTATTCGCTGATCGGCAGCTGGAACAGCGAGATGGAACCCGCGATCAGCAGCACCAGCGACAGCACCGCGGCGAAGATCGGCCGGGTAATGAAGAATTTCGAGAAGTTCAT  <  NC_002947/3878357‑3878210                                                                                                                                                                                                                                                                                 ACCGATGAACTTCTCGAAAGTCTTCATTACCCGGCCGATCTTCGCCGCGGTGCTGTCGCTGGTGCTGCTGATCGCGGGTTCCAGCTCGCTGTTCCAGCTGCCGATCAGCGAATACCCCGAAG‑TGGCGCGCACCACCACGGTGGGCGGCAC                                                                                                                          <  2:214263/150‑1                GAAATTCTTCATTACCCGGCCGATCTTCGCCGCGGTGCTGTCGCTGGTGCTGCTGATCGCGGGTTCCATCTCGCTGTTCCAGCTGCCGATCAGCGAATACCCCGAAGTTGGCGCGCACCACCACGGTGGGCGGCACCACTTCGG                                                                                                                  <  1:1844910/144‑1                GAAATTCTTCATTACCCGGCCGATCTTCGCCGCGGTGCTGTCGCTGGTGCTGCTGATCGCGGGTTCCATCTCGCTGTTCCAGCTGCCGATCAGCGAATACCCCGAAGTTGGCGCGCACCACCACGGTGGGCGGCACCACTTCGG                                                                                                                  >  2:1844910/1‑144                     TCTTCATTACCCGGCCGATCTTCGCCGCGGTGCTGTCGCTGGTGCTGCTGATCGCGGGTTCCATCTCGCTGTTCCAGCTGCCGATCAGCGAATACCCCGAAGTTGGCGCGCACCACCACGGTGGGCGGCACCACTTC                                                                                                                    >  1:159827/1‑137                     TCTTCATTACCCGGCCGATCTTCGCCGCGGTGCTGTCGCTGGTGCTGCTGATCGCGGGTTCCATCTCGCTGTTCCAGCTGCCGATCAGCGAATACCCCGAAGTTGGCGCGCACCACCACGGTGGGCGGCACCACTTC                                                                                                                    <  2:159827/137‑1                                                                                                                          GTTGGCGCGCACCACCACGGTGGGCGGCACCACTTCGGGGTATTCGCTGATCGGCAGCTGGAACAGCGAGCTGGAACCCGCGATCAGCAGCACCAGCGACAGCACCGCGGCGAAGATCGGCCGGGTAATGAAGAATTTCGAGAAGTTCAT  >  2:437388/1‑150                                                                                                                                                                                                                                                                                 ACCGATGAACTTCTCGAAATTCTTCATTACCCGGCCGATCTTCGCCGCGGTGCTGTCGCTGGTGCTGCTGATCGCGGGTTCCATCTCGCTGTTCCAGCTGCCGATCAGCGAATACCCCGAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3878206‑3878328 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagtTGGCGCGCACCACCACGGTGGGCGGCACCACTTCGGGGTATTCGCTGATCGGCAGCTGGAACAGCGAGATGGAACCCGCGATCAGCAGCACCAGCGACAGCACCGCGGCGAAGATCGGCCGGGTAATGAAGAATTTCGAGAAGTTCAT  <  NC_002947/3878357‑3878210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.