New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2378516 =	74 (0.840)	4 (0.050)	4/232	NT	5.1%	coding (28/273 nt)	PP_2086	CrfX family protein
	?	NC_002947	2378589 =	80 (0.960)					coding (101/273 nt)	PP_2086	CrfX family protein

AGTGGTGGCTGTTCCGGCGGTTGCGGTGGGTATAGCTGTGCAATTTGAAACCTTCGTGCCAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGC  >  NC_002947/2378367‑2378663                                                                                                                                                      |                                                                                                                                                    ggtggtgGCTGTTCCGGCGGTTGCGGTGGGTATAGCTGTGCAATTTGAAACCTTCGTGCCAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTgc                                                                                                                                                     <  1:1004914/149‑1 (MQ=255) gccattggcagcgttgcgggaagagtgtcgacgcaccggcgcaacatgcgccgagccattgttcacggcaatcagcagcgcctggctccagcggccaagcaggctgaacagatcacccgcgccaacctggcggttggcggttttcagcac                                                                                                                                                     <  2:2218164‑M1/1‑1 (MQ=255)  gtggtgGCTGTTCCGGCGGTTGCGGTGGGTATAGCTGTGCAATTTGAAACCTTCGTGCCAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTgcg                                                                                                                                                    >  1:2390793/1‑150 (MQ=255)     gtggCTGTTCCGGCGGTTGCGGTGGGTATAGCTGCGGAAGATGAAACCGTCGTGCCAACAGGATGTGTAATCCGTCGCCCGCCTATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGa                                                                                                                                                 >  1:1375743/1‑150 (MQ=255)                     ttGCGGTGGGTATAGCTGTGCAATTTGAAACCTTCGTGCCAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCa                                                                                                                                 <  2:774681/150‑1 (MQ=255)                                 taGCTGTGCAATTTGAAACCTTCGTGCCAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAAt                                                                                                                     <  2:145228/150‑1 (MQ=255)                                    cTGTGCAATTTGAAACCTTCGTGCCAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATgac                                                                                                                  >  1:1989026/1‑150 (MQ=255)                                    cTGTGCAATTTGAAACCTTCGTGCCAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATgac                                                                                                                  <  2:977216/150‑1 (MQ=255)                                         cAATTTGAAACCTTCGTGCCAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATgaccggga                                                                                                             >  1:1523123/1‑150 (MQ=255)                                           aacatgcgccgagccattgttcacggcaatcagcagcgcctggctccagcggccaagcaggctgaacagatcacccgcgccaacctggcggttggcggttttcagcaCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATgaccgggacg                                                                                                           <  2:321550‑M1/43‑1 (MQ=255)                                           aTTTGAAACCTTCGTGCCAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGATATCTGCTCAAGGCGTCACCCTCCGGCAATgaccgggagg                                                                                                           >  1:1833096/1‑148 (MQ=255)                                            tttGAAACCTTCGTGCCAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATgaccgggacga                                                                                                          >  1:1217525/1‑150 (MQ=255)                                             ttGAAACCTTCGTGCCAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATgaccgggactac                                                                                                         <  2:1201336/150‑1 (MQ=255)                                                    cTTCGTGCCAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGaccgggacgaccgggacg                                                                                                  >  1:58443/1‑150 (MQ=255)                                                        gTGCCAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGGTCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGAcgc                                                                                              <  2:18281/150‑1 (MQ=255)                                                           ccAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTTCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGAcgccgc                                                                                           <  2:2390793/150‑1 (MQ=255)                                                            cAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCt                                                                                          >  2:1707956/1‑150 (MQ=255)                                                                  gATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTg                                                                                    >  1:1711035/1‑150 (MQ=255)                                                                  gATGTGTGACCCGTCGCCCGGCCATCCGGTATCCGGCTAAAACTGAAGAACGTACGTATGCACGATCCTTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGTGACGACGCCGCTTGCCTg                                                                                    >  1:48308/1‑150 (MQ=255)                                                                    gcaatcagcagcgcctggctccagcggccaagcaggctgaacagatcacccgcgccaacctggcggttggcggttttcagcaCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTggg                                                                                  >  1:321550‑M1/83‑150 (MQ=255)                                                                       gtgACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCtt                                                                                         <  2:913207/140‑1 (MQ=255)                                                                       gtgACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCtt                                                                                         >  1:913207/1‑140 (MQ=255)                                                                          aCCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAg                                                                                                                                       <  1:1352468/91‑1 (MQ=255)                                                                          aCCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAg                                                                                                                                       >  2:1352468/1‑91 (MQ=255)                                                                          aCCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGt                                                                            >  2:1012433/1‑150 (MQ=255)                                                                          aCCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGt                                                                            >  2:570559/1‑150 (MQ=255)                                                                           gcagcgcctggctccagcggccaagcaggctgaacagatcacccgcgccaacctggcggttggcggttttcagcaCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGt                                                                            <  1:2213313‑M1/74‑1 (MQ=255)                                                                           gcagcgcctggctccagcggccaagcaggctgaacagatcacccgcgccaacctggcggttggcggttttcagcaCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTAGCGt                                                                            >  2:2213313‑M1/76‑149 (MQ=255)                                                                            ccGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATgaccgggacgac                                                                                                         <  2:438953/119‑1 (MQ=255)                                                                            ccGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATgaccgggacgac                                                                                                         >  1:438953/1‑119 (MQ=255)                                                                            ccGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGc                                                                          >  1:190158/1‑150 (MQ=255)                                                                             cGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCt                                                                         >  2:569879/1‑150 (MQ=255)                                                                                 gCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGaaa                                                                     <  1:1012433/150‑1 (MQ=255)                                                                                 gCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGaaa                                                                     >  1:2218164/1‑150 (MQ=255)                                                                                   ccGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAaac                                                                   >  1:1885863/1‑150 (MQ=255)                                                                                         aTCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCGTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAaaccgccaa                                                             >  1:892477/1‑150 (MQ=255)                                                                                            tcGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCa                                                                                                                                 >  2:1098218/1‑79 (MQ=255)                                                                                            tcGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCa                                                                                                                                 <  1:1098218/79‑1 (MQ=255)                                                                                            tcGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTgg                                                                                   <  1:2203937/125‑1 (MQ=255)                                                                                            tcGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTgg                                                                                   >  2:2203937/1‑125 (MQ=255)                                                                                            tcGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAaaccgccaaccg                                                          >  1:2059179/1‑150 (MQ=255)                                                                                                  ctTGCTGACACTGCGCGAGGTGCCCATGCCCGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGt                                                    <  2:69633/150‑1 (MQ=255)                                                                                                  ctTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGt                                                    >  2:2155449/1‑150 (MQ=255)                                                                                                   ttGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCTACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGtt                                                   >  1:783605/1‑150 (MQ=255)                                                                                                   ttGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCAGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGtt                                                   >  2:1023236/1‑150 (MQ=255)                                                                                                     gCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTgg                                                 <  2:1523123/150‑1 (MQ=255)                                                                                                      cTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGgc                                                >  2:1099171/1‑150 (MQ=255)                                                                                                        gACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTg                                                                                        >  2:670297/1‑108 (MQ=255)                                                                                                        gACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTg                                                                                        <  1:670297/108‑1 (MQ=255)                                                                                                          cacTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCgg                                            >  2:602388/1‑150 (MQ=255)                                                                                                          cacTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCgg                                            <  1:570559/150‑1 (MQ=255)                                                                                                           acTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATgaccgggacgaccgg                                                                                                      >  2:2168696/1‑91 (MQ=255)                                                                                                           acTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATgaccgggacgaccgg                                                                                                      <  1:2168696/91‑1 (MQ=255)                                                                                                           acTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCggg                                           <  1:1717451/150‑1 (MQ=255)                                                                                                           acTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCggg                                           >  1:1734424/1‑150 (MQ=255)                                                                                                           acTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCggg                                           <  2:892477/150‑1 (MQ=255)                                                                                                           acTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCggg                                           >  1:1056364/1‑150 (MQ=255)                                                                                                                gcgAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATc                                      <  2:541374/150‑1 (MQ=255)                                                                                                                 cgAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCt                                     <  2:1375743/150‑1 (MQ=255)                                                                                                                    ggTGCCCATGTGCGCGCCGTTTGAAGAATCCCTGCGCGAGCTGCTCAAGGCGTCACCCTCCGGCAATGTCCGGGGCGACCGGGACGGCGCCGCTTGCTTGGGTCGCTTGCTGAATTCCGCCAACCGCCAGGTTGGCGCGGGTGATCTGtt                                  <  2:631159/150‑1 (MQ=255)                                                                                                                    ggTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGtt                                  <  2:1217525/150‑1 (MQ=255)                                                                                                                         ccATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGcc                             >  1:465834/1‑150 (MQ=255)                                                                                                                         ccATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGcc                             >  1:1350374/1‑150 (MQ=255)                                                                                                                           aTGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTg                           <  2:1734424/150‑1 (MQ=255)                                                                                                                             gCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGc                                                                                       >  1:2212901/1‑88 (MQ=255)                                                                                                                             gCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGc                                                                                       <  2:2212901/88‑1 (MQ=255)                                                                                                                              cACGAGCCGTATCAAGAAACCCTGCGCCTCACGCTCAATGCTATACCCTCCGGCAATGACCGTGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCtt                        <  2:1833096/150‑1 (MQ=255)                                                                                                                                 gATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTcgc                                                                              <  1:2049231/93‑1 (MQ=255)                                                                                                                                 gATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTcgc                                                                              >  2:2049231/1‑93 (MQ=255)                                                                                                                                 gATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCC‑CCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGcc                    >  1:1180338/1‑150 (MQ=255)                                                                                                                                  agccGTTTGAACAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAACCCGCCAACCGCAAGGTTGCAGCGGGTGATCTGTCCAGCCTGCTTGGcc                    <  1:1067160/148‑1 (MQ=255)                                                                                                                                  aTCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGcc                    >  1:2076733/1‑150 (MQ=255)                                                                                                                                      gTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTg                >  1:757838/1‑150 (MQ=255)                                                                                                                                       tttGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTgg               >  1:1409025/1‑150 (MQ=255)                                                                                                                                       tttGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTgg               >  2:2186442/1‑150 (MQ=255)                                                                                                                                       tttGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTgg               >  2:918609/1‑150 (MQ=255)                                                                                                                                           aagaaTCCCTGCGCGACCTGCTCAAGGCGTCACTCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCTGGCGGTTGgcggtt                                            >  1:1770500/1‑114 (MQ=255)                                                                                                                                           aagaaTCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGcc           >  1:1291854/1‑150 (MQ=255)                                                                                                                                            agaaTCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTggcgcag          <  2:2059179/150‑6 (MQ=255)                                                                                                                                             gaaTCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTgg                      <  2:2126083/137‑1 (MQ=255)                                                                                                                                             gaaTCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTgg                      >  1:2126083/1‑137 (MQ=255)                                                                                                                                             gaaTCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAg         >  1:690375/1‑150 (MQ=255)                                                                                                                                                   cTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCgctg   >  1:1702793/1‑150 (MQ=255)                                                                                                                                                    tGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCgctgc  <  1:1099171/150‑1 (MQ=255)                                                                                                                                                    tGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCgctgc  <  1:602388/150‑1 (MQ=255)                                                                                                                                                    tGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCgctgc  <  2:1350374/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                    AGTGGTGGCTGTTCCGGCGGTTGCGGTGGGTATAGCTGTGCAATTTGAAACCTTCGTGCCAACAGGATGTGTGACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGC  >  NC_002947/2378367‑2378663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.