New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2378516 =74 (0.840)4 (0.050) 4/232 NT 5.1% coding (28/273 nt) PP_2086 CrfX family protein
?NC_002947 2378589 = 80 (0.960)coding (101/273 nt) PP_2086 CrfX family protein

Only 100 of 104 total aligned reads displayed.

ACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCGCCGGTGCGTCGACACTCTTCCCGCAACGCTGCCAATGGCA  >  NC_002947/2378440‑2378738
                                                                                                                                                     |                                                                                                                                                     
aCCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGt                                                                                                                                                       >  2:570559/1‑150 (MQ=255)
aCCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGt                                                                                                                                                       >  2:1012433/1‑150 (MQ=255)
 gcagcgcctggctccagcggccaagcaggctgaacagatcacccgcgccaacctggcggttggcggttttcagcaCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGt                                                                                                                                                       <  1:2213313‑M1/74‑1 (MQ=255)
  ccGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGc                                                                                                                                                     >  1:190158/1‑150 (MQ=255)
   cGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCt                                                                                                                                                    >  2:569879/1‑150 (MQ=255)
       gCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGaaa                                                                                                                                                >  1:2218164/1‑150 (MQ=255)
       gCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGaaa                                                                                                                                                <  1:1012433/150‑1 (MQ=255)
         ccGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAaac                                                                                                                                              >  1:1885863/1‑150 (MQ=255)
               aTCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCGTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAaaccgccaa                                                                                                                                        >  1:892477/1‑150 (MQ=255)
                  tcGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAaaccgccaaccg                                                                                                                                     >  1:2059179/1‑150 (MQ=255)
                        ctTGCTGACACTGCGCGAGGTGCCCATGCCCGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGt                                                                                                                               <  2:69633/150‑1 (MQ=255)
                        ctTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGt                                                                                                                               >  2:2155449/1‑150 (MQ=255)
                         ttGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCTACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGtt                                                                                                                              >  1:783605/1‑150 (MQ=255)
                         ttGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCAGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGtt                                                                                                                              >  2:1023236/1‑150 (MQ=255)
                           gCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTgg                                                                                                                            <  2:1523123/150‑1 (MQ=255)
                                cacTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCgg                                                                                                                       <  1:570559/150‑1 (MQ=255)
                                cacTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCgg                                                                                                                       >  2:602388/1‑150 (MQ=255)
                                 acTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCggg                                                                                                                      <  1:1717451/150‑1 (MQ=255)
                                 acTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCggg                                                                                                                      >  1:1734424/1‑150 (MQ=255)
                                 acTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCggg                                                                                                                      <  2:892477/150‑1 (MQ=255)
                                 acTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCggg                                                                                                                      >  1:1056364/1‑150 (MQ=255)
                                      gcgAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATc                                                                                                                 <  2:541374/150‑1 (MQ=255)
                                       cgAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCt                                                                                                                <  2:1375743/150‑1 (MQ=255)
                                          ggTGCCCATGTGCGCGCCGTTTGAAGAATCCCTGCGCGAGCTGCTCAAGGCGTCACCCTCCGGCAATGTCCGGGGCGACCGGGACGGCGCCGCTTGCTTGGGTCGCTTGCTGAATTCCGCCAACCGCCAGGTTGGCGCGGGTGATCTGtt                                                                                                             <  2:631159/150‑1 (MQ=255)
                                          ggTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGtt                                                                                                             <  2:1217525/150‑1 (MQ=255)
                                               ccATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGcc                                                                                                        >  1:1350374/1‑150 (MQ=255)
                                               ccATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGcc                                                                                                        >  1:465834/1‑150 (MQ=255)
                                                 aTGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTg                                                                                                      <  2:1734424/150‑1 (MQ=255)
                                                    cACGAGCCGTATCAAGAAACCCTGCGCCTCACGCTCAATGCTATACCCTCCGGCAATGACCGTGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCtt                                                                                                   <  2:1833096/150‑1 (MQ=255)
                                                       gATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCC‑CCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGcc                                                                                               >  1:1180338/1‑150 (MQ=255)
                                                        agccGTTTGAACAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAACCCGCCAACCGCAAGGTTGCAGCGGGTGATCTGTCCAGCCTGCTTGGcc                                                                                               <  1:1067160/148‑1 (MQ=255)
                                                        aTCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGcc                                                                                               >  1:2076733/1‑150 (MQ=255)
                                                            gTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTg                                                                                           >  1:757838/1‑150 (MQ=255)
                                                             tttGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTgg                                                                                          >  1:1409025/1‑150 (MQ=255)
                                                             tttGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTgg                                                                                          >  2:2186442/1‑150 (MQ=255)
                                                             tttGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTgg                                                                                          >  2:918609/1‑150 (MQ=255)
                                                                 aagaaTCCCTGCGCGACCTGCTCAAGGCGTCACTCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCTGGCGGTTGgcggtt                                                                                                                       >  1:1770500/1‑114 (MQ=255)
                                                                 aagaaTCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGcc                                                                                      >  1:1291854/1‑150 (MQ=255)
                                                                  agaaTCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTggcgcag                                                                                     <  2:2059179/150‑6 (MQ=255)
                                                                   gaaTCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTgg                                                                                                 >  1:2126083/1‑137 (MQ=255)
                                                                   gaaTCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTgg                                                                                                 <  2:2126083/137‑1 (MQ=255)
                                                                   gaaTCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAg                                                                                    >  1:690375/1‑150 (MQ=255)
                                                                         cTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCgctg                                                                              >  1:1702793/1‑150 (MQ=255)
                                                                          tGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCgctgc                                                                             <  1:1099171/150‑1 (MQ=255)
                                                                          tGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCgctgc                                                                             <  1:602388/150‑1 (MQ=255)
                                                                          tGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCgctgc                                                                             <  2:1350374/150‑1 (MQ=255)
                                                                           acgctacccaggcaagcggcgtcgtcccggtcgtcccggtcattgccggagggtgacgccttgagcaggtcgcgTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCgctgc                                                                             >  2:2213313‑M2/75‑149 (MQ=255)
                                                                           acgcgacccaggcaagcggcgtcgtcccggtcgtcccggtcattgccggagggtgacgccttgagcaggtcgcgTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCgctgc                                                                             <  1:2213313‑M2/75‑1 (MQ=255)
                                                                             gcgACCTGCTCAAGACGTCACCCTCCGGCAATGAACGGGAGGACCGGCACGACGCCACTTGCCTGGGTCGCGTGATGAAGACCGCCAACCTCCAGGTTGGCTCGGGAGATCTATTCAGCCTTCCTGACAACTCGATCCAAGCgctgctca                                                                          >  2:81464/1‑148 (MQ=255)
                                                                             GCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGa                                                                          >  2:58443‑M1/1‑150 (MQ=255)
                                                                             GCGACCTCCTCAAGGCGTCATCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGa                                                                          >  1:1049318‑M1/1‑150 (MQ=255)
                                                                              CGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGAt                                                                         >  1:2155449‑M1/1‑150 (MQ=255)
                                                                               GACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGAtt                                                                        >  2:1989026‑M1/1‑150 (MQ=255)
                                                                               GACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCGGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCcaggcactgcccatt                                                                        <  2:1666304‑M1/150‑6 (MQ=255)
                                                                               GACCTGCTCAAGGCGTCACCCTCCGGCAATGACACGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGAtt                                                                        <  1:1169771‑M1/150‑1 (MQ=255)
                                                                                 cccaggcaagcggcgtcgtcccggtcgtcccggtcattgccggagggtgacgccttgagcaggtcgcgTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGc                                                                      >  1:321550‑M2/69‑150 (MQ=255)
                                                                                  CTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGcc                                                                     <  2:2053246‑M1/150‑1 (MQ=255)
                                                                                   tGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCgg                                                                                                                       >  1:802176/1‑99 (MQ=255)
                                                                                   tGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCgg                                                                                                                       <  2:802176/99‑1 (MQ=255)
                                                                                   tGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCg                                                                    >  2:433853/1‑150 (MQ=255)
                                                                                    gCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGt                                                                   <  2:690375/150‑1 (MQ=255)
                                                                                     cTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAgg                                                                                                                                <  1:1811709/88‑1 (MQ=255)
                                                                                     cTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAgg                                                                                                                                >  2:1811709/1‑88 (MQ=255)
                                                                                      tCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAg                                                                                                                                 <  1:123985/86‑1 (MQ=255)
                                                                                      tCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAg                                                                                                                                 >  2:123985/1‑86 (MQ=255)
                                                                                      tCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGa                                                                 >  1:810857/1‑150 (MQ=255)
                                                                                        aaGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAgg                                                                                                                                >  1:1613508/1‑85 (MQ=255)
                                                                                        aaGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAgg                                                                                                                                <  2:1613508/85‑1 (MQ=255)
                                                                                        aaGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGCCCCTTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAAc                                                               >  1:1353345/1‑150 (MQ=255)
                                                                                        aaGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAAc                                                               <  1:2186442/150‑1 (MQ=255)
                                                                                          ggCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGc                                                                                       >  1:1864327/1‑124 (MQ=255)
                                                                                          ggCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGc                                                                                       <  2:1864327/124‑1 (MQ=255)
                                                                                          ggCGTCACCATCCGGCAATGACCGGGACGAACGAGACGACGACGCCTGCCTGGGCCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTAGGCCGCTGGCGCCAGCCGCTGCTGATTGCCGTGAaaaa                                                             >  2:84657/1‑150 (MQ=255)
                                                                                           gCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAAt                                                            >  2:54004/1‑150 (MQ=255)
                                                                                            cGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATg                                                           <  2:1409025/150‑1 (MQ=255)
                                                                                              tCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGc                                                         >  2:1670393/1‑150 (MQ=255)
                                                                                                 cccTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCg                                                      <  2:783605/150‑1 (MQ=255)
                                                                                                   cTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGa                                                                                                                   >  1:341615/1‑87 (MQ=255)
                                                                                                   cTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGa                                                                                                                   <  2:341615/87‑1 (MQ=255)
                                                                                                    tCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCgggg                                                   <  1:84657/150‑3 (MQ=255)
                                                                                                       ggCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCAt                                                <  2:1180338/150‑1 (MQ=255)
                                                                                                          cgtcccggtcattgccggagggtgacgccttgagcaggtcgcgTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGtt                                             <  2:321550‑M2/107‑1 (MQ=255)
                                                                                                              accgggacgaccgggacgACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTgcgc                                         <  1:918609/150‑1 (MQ=255)
                                                                                                                       cccgatacgacaCCGCTTGCCGGGGTGGCGTGCTGAAACCCGCCAACCCGCAAGTTGGCGGGGGTGATTTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTCGACAATGTCTCGTCGCATGTTGCGCCGGTGCGTc                                <  2:301537/144‑1 (MQ=255)
                                                                                                                           ggacgacGCCGCTTGCCTGGGTCGCGTGCTGAAATCCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGATATCCCGTGCCCCTTGAACAATGGCTCGGCGCATGTTGCGCCGGTGCGTCGaca                            <  1:1023236/150‑1 (MQ=255)
                                                                                                                           ggacgacGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCGCCGGTGCGTCGaca                            <  1:433853/150‑1 (MQ=255)
                                                                                                                           ggacgacGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCGCCGGTGCGTCGaca                            <  2:757838/150‑1 (MQ=255)
                                                                                                                                 cgccgcTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCGCCGGTGCGTCGACACTCTTc                      <  1:54004/150‑1 (MQ=255)
                                                                                                                                  gccgcTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCgctgc                                                                             >  1:1493784/1‑94 (MQ=255)
                                                                                                                                  gccgcTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCgctgc                                                                             <  2:1493784/94‑1 (MQ=255)
                                                                                                                                  gccgcTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCGCCGGTGCGTCGACACTCTTcc                     <  2:810857/150‑1 (MQ=255)
                                                                                                                                    cgcTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCGcc                                        <  1:1285918/129‑1 (MQ=255)
                                                                                                                                    cgcTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCGcc                                        >  2:1285918/1‑129 (MQ=255)
                                                                                                                                            tGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCCGCGCATGTTGCGCCGCTGCGTCGACACTCTTCCCGCAACGCTg           >  2:707755/1‑150 (MQ=255)
                                                                                                                                             gggTCGCGTGCTGAAACCCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCGCCGGTGCGTCGACACTCTTCCCGCAACGCTGc          <  2:190158/150‑1 (MQ=255)
                                                                                                                                                    gTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCGCCGGTGCGTCGACACTCTTCCCGCAACGCTGCCAATGGc   <  2:2218164‑M2/149‑1 (MQ=255)
                                                                                                                                                     tGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCGCCGGTGCGTCGACACTCTTCCCGCAACGCTGCCAATGgca  <  2:1711035/150‑1 (MQ=255)
                                                                                                                                                     tGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCACCGGt                                     <  2:155697/115‑1 (MQ=255)
                                                                                                                                                     tGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGATGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCACCGGt                                     >  1:155697/1‑115 (MQ=255)
                                                                                                                                                     tGCTGAAAACAGCCAAACGCCAAGTTGGCGCGGTTGATCTGTTTAGCCTGCTTGGCCGCTGGAGCTAGGCGCTGCTGATTCCCGTGAACATTCGCTCGGTGTATGTTGCGCCGGTGACTCGACACTCTTCCCGCAACGCTGCCAATGgca  <  2:48308/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACCCGTCGCCCGGCCATCTCGTCTCTTGCTGACACTGCGCGAGGTGCCCATGCACGATCCGTTTGAAGAATCCCTGCGCGACCTGCTCAAGGCGTCACCCTCCGGCAATGACCGGGACGACCGGGACGACGCCGCTTGCCTGGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCGCCGGTGCGTCGACACTCTTCCCGCAACGCTGCCAATGGCA  >  NC_002947/2378440‑2378738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.