New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2378516 =	74 (0.840)	4 (0.050)	4/232	NT	5.1%	coding (28/273 nt)	PP_2086	CrfX family protein
	?	NC_002947	2378589 =	80 (0.960)					coding (101/273 nt)	PP_2086	CrfX family protein

GGCAATCAGCAGCGCCTGGCTCCAGCGGCCAAGCAGGCTGAACAGATCACCCGCGCCAACCTGGCGGTTGGCGGTTTTCAGCACGCGACCCAGGCAAGCGGCGTCGTCCCGGTCGTCCCGGTCATTGCCGGAGGGTGACGCCTTGAGCAGGTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2378671‑2378516 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgcgTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCGCCGGTGCGTCGACACTCTTCCCGCAACGCTGCCAATGGC  >  NC_002947/2378589‑2378737                                                                                                                                                                                                                                                                                                                   GGCAATCAGCAGCGCCTGGCTCCAGCGGCCAAGCAGGCTGAACAGATCACCCGCGCCAACCTGGCGGTTGGCGGTTTTCAGCACGCGACCCAGGCAAGCGGCGTCGTCCCGGTCGTCCCGGTCATTGCCGGAGGGTGACGCCTTGAGCAG                                                                                                                                                             <  2:2053246/150‑1    aatggGCAGTGCCTGGCTCCAGCGGCCAAGCAGGCTGAACAGATCACCCGCGCCAACCTGGCGGTTGGCGGTTTTCCGCACGCGACCCAGGCAAGCGGCGTCGTCCCGGTCGTCCCGGTCATTGCCGGAGGGTGACGCCTTGAGCAGGTC                                                                                                                                                          <  2:1666304/145‑1    AATCAGCAGCGCCTGGCTCCAGCGGCCAAGCAGGCTGAACAGATCACCCGCGCCAACCTGGCGGTTGGCGGTTTTCAGCACGCGACCCAGGCAAGCGGCGTCGTCCCGGTCGTCCGTGTCATTGCCGGAGGGTGACGCCTTGAGCAGGTC                                                                                                                                                          <  1:1169771/150‑1    AATCAGCAGCGCCTGGCTCCAGCGGCCAAGCAGGCTGAACAGATCACCCGCGCCAACCTGGCGGTTGGCGGTTTTCAGCACGCGACCCAGGCAAGCGGCGTCGTCCCGGTCGTCCCGGTCATTGCCGGAGGGTGACGCCTTGAGCAGGTC                                                                                                                                                          >  2:1989026/1‑150     ATCAGCAGCGCCTGGCTCCAGCGGCCAAGCAGGCTGAACAGATCACCCGCGCCAACCTGGCGGTTGGCGGTTTTCAGCACGCGACCCAGGCAAGCGGCGTCGTCCCGGTCGTCCCGGTCATTGCCGGAGGGTGACGCCTTGAGCAGGTCG                                                                                                                                                         >  1:2155449/1‑150      TCAGCAGCGCCTGGCTCCAGCGGCCAAGCAGGCTGAACAGATCACCCGCGCCAACCTGGCGGTTGGCGGTTTTCAGCACGCGACCCAGGCAAGCGGCGTCGTCCCGGTCGTCCCGGTCATTGCCGGAGGGTGACGCCTTGAGCAGGTCGC                                                                                                                                                        >  2:58443/1‑150      TCAGCAGCGCCTGGCTCCAGCGGCCAAGCAGGCTGAACAGATCACCCGCGCCAACCTGGCGGTTGGCGGTTTTCAGCACGCGACCCAGGCAAGCGGCGTCGTCCCGGTCGTCCCGGTCATTGCCGGAGGATGACGCCTTGAGGAGGTCGC                                                                                                                                                        >  1:1049318/1‑150                                                                                   ACGCTACCCAGGCAAGCGGCGTCGTCCCGGTCGTCCCGGTCATTGCCGGAGGGTGACGCCTTGAGCAGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGC                                                                            >  2:2213313/1‑149                                                                                   ACGCGACCCAGGCAAGCGGCGTCGTCCCGGTCGTCCCGGTCATTGCCGGAGGGTGACGCCTTGAGCAGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGC                                                                            <  1:2213313/149‑1                                                                                         CCCAGGCAAGCGGCGTCGTCCCGGTCGTCCCGGTCATTGCCGGAGGGTGACGCCTTGAGCAGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGC                                                                     >  1:321550/1‑150                                                                                                                  CGTCCCGGTCATTGCCGGAGGGTGACGCCTTGAGCAGGTCGCGTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTT                                            <  2:321550/150‑1                                                                                                                                                            GTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCGCCGGTGCGTCGACACTCTTCCCGCAACGCTGCCAATGGC  <  2:2218164/150‑1                                                                                                                                                                                                                                                                                                                   GGCAATCAGCAGCGCCTGGCTCCAGCGGCCAAGCAGGCTGAACAGATCACCCGCGCCAACCTGGCGGTTGGCGGTTTTCAGCACGCGACCCAGGCAAGCGGCGTCGTCCCGGTCGTCCCGGTCATTGCCGGAGGGTGACGCCTTGAGCAGGTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2378671‑2378516 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgcgTGCTGAAAACCGCCAACCGCCAGGTTGGCGCGGGTGATCTGTTCAGCCTGCTTGGCCGCTGGAGCCAGGCGCTGCTGATTGCCGTGAACAATGGCTCGGCGCATGTTGCGCCGGTGCGTCGACACTCTTCCCGCAACGCTGCCAATGGC  >  NC_002947/2378589‑2378737

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.