New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4541345 =	75 (0.850)	8 (0.090)	6/236	NT	9.6%	coding (18/1503 nt)	nhaB	Na(+)/H(+) antiporter NhaB
	?	NC_002947	4541382 =	78 (0.920)					coding (55/1503 nt)	nhaB	Na(+)/H(+) antiporter NhaB

GGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATGGCCCTGAAATGCTACCCGTTGAT  >  NC_002947/4541233‑4541524                                                                                                                                                      |                                                                                                                                               ggCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGa                                                                                                                                                <  1:32635/150‑1 (MQ=255)   gtgaagatgaattcgagcaccagtgcccagccggtcgcaaccgggccaatggttaccaacaacagcgggttgagcaccaaaaacaggcagatgaccaccttgtaccaaatCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGAtt                                                                                                                                              >  1:2250541‑M1/111‑150 (MQ=255)             gCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAgg                                                                                                                                    <  1:468799/150‑1 (MQ=255)              ccAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAggt                                                                                                                                   >  2:1908716/1‑150 (MQ=255)               cAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATCTCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAggtg                                                                                                                                  <  1:508557/150‑1 (MQ=255)                 aaaaCGGGACTGTGCGCCTTGCCTAAGCCGCGTATATCCGGAACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCATGCCCCCCGACCAGCGCCCTCGCCCACGGTTTTCGTTGCAAGTGGCAGACGGGATACAGggtggg                                                                                                                                >  2:792152/1‑149 (MQ=255)                  aaaCGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTc                                                                                                                               <  2:54892/150‑1 (MQ=255)                      gtgACTGTGCGCCTTGCCCAAGACGCGTATATCCGGCACCGTGCGGTTCCGCTGAATTATAAGGATACATATTTATGCCACGCCCCCTGACCGGTGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCt                                                                                                                           <  1:263479/148‑1 (MQ=255)                       cagtgcccagccggtcgcaaccgggccaatggttaccaacaacagcgggttgagcaccaaaaacaggcagatgaccaccttgtaccaaatCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTgg                                                                                                                                           <  1:2038377‑M1/43‑1 (MQ=255)                       cagtgcccagccggtcgcaaccgggccaatggttaccaacaacagcgggttgagcaccaaaaacaggcagatgaccaccttgtaccaaatCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTgg                                                                                                                                           >  2:2038377‑M1/91‑133 (MQ=255)                        gACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGc                                                                                                                         <  2:221976/150‑1 (MQ=255)                          cTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCt                                                                                                                       <  1:2086920/150‑1 (MQ=255)                                 ccTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAACCATTAGAGTACATATTTTTGTCACGCCCAATGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTg                                                                                                                <  1:543986/150‑1 (MQ=255)                                   ttGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGt                                                                                                              >  2:2187272/1‑150 (MQ=255)                                      ccTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCt                                                                                                           >  1:729112/1‑150 (MQ=255)                                        tAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCa                                                                                                         >  2:2115560/1‑150 (MQ=255)                                                   tatCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTg                                                                                                             <  1:2389739/135‑1 (MQ=255)                                                   tatCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTg                                                                                                             >  2:2389739/1‑135 (MQ=255)                                                     tCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTgttgtt                                                                                            >  2:956306/1‑150 (MQ=255)                                                     tCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTgttgtt                                                                                            >  2:2017637/1‑150 (MQ=255)                                                     tCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTgttgtt                                                                                            >  1:1605551/1‑150 (MQ=255)                                                      ccGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGttgttg                                                                                           <  1:956306/150‑1 (MQ=255)                                                      ccGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGttgttg                                                                                           <  1:1322894/150‑1 (MQ=255)                                                       cGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTgg                                                                                          >  1:2335665/1‑150 (MQ=255)                                                        ggCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGt                                                                                         <  2:2207867/150‑1 (MQ=255)                                                          cACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTaa                                                                                       <  2:439270/150‑1 (MQ=255)                                                           aCCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAAc                                                                                      >  2:1318443/1‑150 (MQ=255)                                                               tGCGCCAACGCTGAATTACAAGTATATATTGTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTaaatgtc                                                                                  <  1:1892033/150‑6 (MQ=255)                                                                  gcCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGc                                                                               <  1:346173/150‑1 (MQ=255)                                                                  gcCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGc                                                                               >  2:283251/1‑150 (MQ=255)                                                                    cATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAg                                                                                                                                     <  1:2328753/94‑1 (MQ=255)                                                                    cATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAg                                                                                                                                     >  2:2328753/1‑94 (MQ=255)                                                                     aTCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCg                                                                            <  2:691613/150‑1 (MQ=255)                                                                        gCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGtt                                                                         >  2:1782911/1‑150 (MQ=255)                                                                          tGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGAttt                                                                                                                                             >  2:1143641/1‑80 (MQ=255)                                                                          tGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGAttt                                                                                                                                             <  1:1143641/80‑1 (MQ=255)                                                                          tGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCtgtt                                                                                               >  2:59450/1‑126 (MQ=255)                                                                          tGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCtgtt                                                                                               <  1:59450/126‑1 (MQ=255)                                                                          tGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGttgttg                                                                                           <  2:814013/130‑1 (MQ=255)                                                                          tGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGttgttg                                                                                           >  1:814013/1‑130 (MQ=255)                                                                                ataAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTg                                                                                                                          <  2:547439/93‑1 (MQ=255)                                                                                ataAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTg                                                                                                                          >  1:547439/1‑93 (MQ=255)                                                                                ataAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTTTTTTTGGTGCTCAACCCGCTgttgtt                                                                                            <  1:64368/123‑1 (MQ=255)                                                                                ataAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTgttgtt                                                                                            >  2:64368/1‑123 (MQ=255)                                                                                   aGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGc                                                                                                            <  1:1781186/104‑1 (MQ=255)                                                                                   aGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGc                                                                                                            >  2:1781186/1‑104 (MQ=255)                                                                                   aGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTg                                                              <  1:1908716/150‑1 (MQ=255)                                                                                       tACATATTTATGTCATGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCa                                                          <  1:792152/150‑1 (MQ=255)                                                                                       tACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAggtgg                                                                                                                                 <  1:1350132/79‑1 (MQ=255)                                                                                       tACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAggtgg                                                                                                                                 >  2:1350132/1‑79 (MQ=255)                                                                                       tACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCa                                                          <  2:1605551/150‑1 (MQ=255)                                                                                          atatTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTg                                                       <  1:1318443/150‑1 (MQ=255)                                                                                             tttATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTg                                                    >  1:1908704/1‑150 (MQ=255)                                                                                              ttATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGc                                                   <  2:1905063/150‑1 (MQ=255)                                                                                                 tGTCACTCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCg                                                >  1:353929/1‑150 (MQ=255)                                                                                                     aCGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCtgttgt                                                                                             >  1:2106758/1‑101 (MQ=255)                                                                                                     aCGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCtgttgt                                                                                             <  2:2106758/101‑1 (MQ=255)                                                                                                          cccTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCt                                       >  2:1136730/1‑150 (MQ=255)                                                                                                           ccaaatcggcgacttgcccagaaaaccgtgggcgagggcgccgATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTg                                                       <  1:2038377‑M2/90‑1 (MQ=255)                                                                                                           ccaaatcggcgacttgcccagaaaaccgtgggcgagggcgccgATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTg                                                       >  2:2038377‑M2/44‑133 (MQ=255)                                                                                                           ccTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCtt                                      >  1:1218727/1‑150 (MQ=255)                                                                                                            cTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCGTGGGGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTc                                     >  1:1231961/1‑150 (MQ=255)                                                                                                             tGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCa                                    <  1:2115560/150‑1 (MQ=255)                                                                                                             tGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCa                                    <  2:2335665/150‑1 (MQ=255)                                                                                                              aatcggcgacttgcccagaaaaccgtgggcgagggcgccgATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCAc                                   >  1:2250541‑M2/41‑150 (MQ=255)                                                                                                                  GGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTg                               >  1:1782911‑M1/1‑150 (MQ=255)                                                                                                                   gcgacttgcccagaaaaccgtgggcgagggcgccgATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTATTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAAt                                             >  1:2204868‑M2/36‑135 (MQ=255)                                                                                                                   gcgacttgcccagaaaaccgtgggcgagggcgccgATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTATTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAAt                                             <  2:2204868‑M2/100‑1 (MQ=255)                                                                                                                   GCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCCTTGGCCCGGTTGCGACCGGCTGCGCACTGATGCTCGAATTCATCTTCACcctcc                              <  2:249109‑M1/150‑3 (MQ=255)                                                                                                                     gacttgcccagaaaaccgtgggcgagggcgccgATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTg                                                       >  1:907672‑M2/34‑123 (MQ=255)                                                                                                                     gacttgcccagaaaaccgtgggcgagggcgccgATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTg                                                       <  2:907672‑M2/90‑1 (MQ=255)                                                                                                                     gacttgcccagaaaaccgtgggcgagggcgccgATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGcc                            >  1:1760189‑M2/34‑150 (MQ=255)                                                                                                                       ccTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCt                                                                                                                           <  2:409911/53‑1 (MQ=255)                                                                                                                       ccTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCt                                                                                                                           >  1:409911/1‑53 (MQ=255)                                                                                                                         tCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATgg                        <  1:283251/150‑1 (MQ=255)                                                                                                                              cACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCt                                                                                                  >  2:120253/1‑71 (MQ=255)                                                                                                                              cACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCt                                                                                                  <  1:120253/71‑1 (MQ=255)                                                                                                                               aCGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCtgttgt                                                                                             <  2:260330/75‑1 (MQ=255)                                                                                                                               aCGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCtgttgt                                                                                             >  1:260330/1‑75 (MQ=255)                                                                                                                                cGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATGGCCCTGaa                 <  2:729112/150‑1 (MQ=255)                                                                                                                                 ggTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTg                                                                                 >  2:1225195/1‑85 (MQ=255)                                                                                                                                 ggTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTg                                                                                 <  1:1225195/85‑1 (MQ=255)                                                                                                                                   aaccgtGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTgg                              >  2:209546/6‑134 (MQ=255)                                                                                                                                   aaccgtGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTgg                              <  1:209546/129‑1 (MQ=255)                                                                                                                                     ttCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCCCCCTGGCCATGGCCCTGAAATGCt            >  2:766335/1‑150 (MQ=255)                                                                                                                                     ttCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATGGCCCTGAAATGCt            >  2:886140/1‑150 (MQ=255)                                                                                                                                      tCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATGGCCCTGAAATGCTa           <  1:886140/150‑1 (MQ=255)                                                                                                                                         gggCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTg                                                       >  1:1666362/1‑103 (MQ=255)                                                                                                                                         gggCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTg                                                       <  2:1666362/103‑1 (MQ=255)                                                                                                                                         gggCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATGGCCCTGAAATGCTAccc        >  2:223631/1‑150 (MQ=255)                                                                                                                                          ggCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGAc                                                                    >  2:1299661/1‑89 (MQ=255)                                                                                                                                          ggCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGAc                                                                    <  1:1299661/89‑1 (MQ=255)                                                                                                                                          ggCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTg                                                       >  2:1031031/1‑102 (MQ=255)                                                                                                                                          ggCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTg                                                       <  1:1031031/102‑1 (MQ=255)                                                                                                                                            cAAGTCCCAGATTTGCTACAAGGTGGTCATCTGTCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATGGCCCTGAAATGCTACCCGtt     >  2:150491/1‑150 (MQ=255)                                                                                                                                               gTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATGGCCCTGAAATGCTACCCGTTGAt  <  1:223631/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                               GGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGGTTTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGCCATGGCCCTGAAATGCTACCCGTTGAT  >  NC_002947/4541233‑4541524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.