New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2568662 | 95 (1.070) | 6 (0.070) | 5/234 | NT | 6.1% | coding (929/1050 nt) | PP_2252 | hypothetical protein |
? | NC_002947 | = 2568673 | 93 (1.100) | coding (918/1050 nt) | PP_2252 | hypothetical protein |
TTGCGCTGCGAAAACGCCGGCACAGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2568509‑2568662 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccaGAGCGGGGCCATGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGGTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGATCATTCGCCTGCCACCTTAGTGGCGGCCTGT < NC_002947/2568673‑2568530 TTGCGCTGCGAAAACGCCGGCACAGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCC > 2:1337822/1‑150 GCGCTGCGAAAACGCCGGCACACGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCACCAAGCTGTACTCAACCTGCCCCGTCAGGTAATACACCCCCGC < 2:153822/150‑1 AGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCC > 1:223191/1‑127 AGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCC < 2:223191/127‑1 TGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCAGAGCGGGGCCATGGCGGGG < 1:198993/104‑1 TGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCAGAGCGGGGCCATGGCGGGG > 2:198993/1‑104 GCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCAGAGCGGGGCCATGGCGGGG > 1:56134/1‑76 GCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCAGAGCGGGGCCATGGCGGGG < 2:56134/76‑1 TCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGTTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGA < 2:2082098/147‑1 TCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGGTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGA > 1:2082098/1‑147 CCGCCAGAGCGGGGCCATGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGGTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGA > 1:1319623/1‑119 CCGCCAGAGCGGGGCCATGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGGTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGA < 2:1319623/119‑1 CCAGAGCGGGGCCATGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGGTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGATCATTCGCCTGCCACCTTAGTGGCGGCCTGT < 1:1258040/147‑1 CCAGAGCGGGGCCATGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGGTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGATCATTCGCCTGCCACCTTAGTGGCGGCCTGT > 2:1258040/1‑147 TTGCGCTGCGAAAACGCCGGCACAGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2568509‑2568662 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccaGAGCGGGGCCATGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGGTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGATCATTCGCCTGCCACCTTAGTGGCGGCCTGT < NC_002947/2568673‑2568530 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |