New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 256866295 (1.070)6 (0.070) 5/234 NT 6.1% coding (929/1050 nt) PP_2252 hypothetical protein
?NC_002947 = 2568673 93 (1.100)coding (918/1050 nt) PP_2252 hypothetical protein

TTGCGCTGCGAAAACGCCGGCACAGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2568509‑2568662
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccaGAGCGGGGCCATGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGGTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGATCATTCGCCTGCCACCTTAGTGGCGGCCTGT  <  NC_002947/2568673‑2568530
                                                                                                                                                                                                                                                                                                          
TTGCGCTGCGAAAACGCCGGCACAGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCC                                                                                                                                                      >  2:1337822/1‑150
  GCGCTGCGAAAACGCCGGCACACGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCACCAAGCTGTACTCAACCTGCCCCGTCAGGTAATACACCCCCGC                                                                                                                                                    <  2:153822/150‑1
                       AGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCC                                                                                                                                                      >  1:223191/1‑127
                       AGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCC                                                                                                                                                      <  2:223191/127‑1
                                                                     TGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCAGAGCGGGGCCATGGCGGGG                                                                                                                               <  1:198993/104‑1
                                                                     TGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCAGAGCGGGGCCATGGCGGGG                                                                                                                               >  2:198993/1‑104
                                                                                                 GCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCAGAGCGGGGCCATGGCGGGG                                                                                                                               >  1:56134/1‑76
                                                                                                 GCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCAGAGCGGGGCCATGGCGGGG                                                                                                                               <  2:56134/76‑1
                                                                                                                        TCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGTTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGA                                 <  2:2082098/147‑1
                                                                                                                        TCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGGTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGA                                 >  1:2082098/1‑147
                                                                                                                                                    CCGCCAGAGCGGGGCCATGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGGTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGA                                 >  1:1319623/1‑119
                                                                                                                                                    CCGCCAGAGCGGGGCCATGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGGTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGA                                 <  2:1319623/119‑1
                                                                                                                                                       CCAGAGCGGGGCCATGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGGTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGATCATTCGCCTGCCACCTTAGTGGCGGCCTGT  <  1:1258040/147‑1
                                                                                                                                                       CCAGAGCGGGGCCATGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGGTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGATCATTCGCCTGCCACCTTAGTGGCGGCCTGT  >  2:1258040/1‑147
                                                                                                                                                                                                                                                                                                          
TTGCGCTGCGAAAACGCCGGCACAGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2568509‑2568662
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccaGAGCGGGGCCATGGCGGGGGTCTATTACCTGTCGGGGCAGGTTGAGGACAGCTTGCTGGCCAGTGCGCCGCGGCCGGTGGAGCAGCAGGTCGAGCAGCAGCAGGCGCCTTTGATCATTCGCCTGCCACCTTAGTGGCGGCCTGT  <  NC_002947/2568673‑2568530

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.