New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 4960993125 (1.410)8 (0.100) 7/230 NT 6.6% intergenic (‑130/+134) fliE/atoC flagellar hook‑basal body complex protein FliE/two‑component system DNA‑binding transcriptional activator AtoC
?NC_002947 = 4961078 108 (1.310)intergenic (‑215/+49) fliE/atoC flagellar hook‑basal body complex protein FliE/two‑component system DNA‑binding transcriptional activator AtoC

Only 100 of 135 total aligned reads displayed.

CAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCT  >  NC_002947/4960930‑4961227
                                                                                                                                                     |                                                                                                                                                     
cAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACAc                                                                                                                                                      <  1:1439831‑M2/150‑2 (MQ=255)
 aaaGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGAccca                                                                                                                                                     >  2:1094930/1‑150 (MQ=255)
         cAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCACAGCGGCCCCGTCGATCTTTGCGCCGGATCTGGAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACCCAAGGCCGtt                                                                                                                                             >  2:42573/1‑150 (MQ=38)
            ccTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCTTCGCCGGCGATCTTTGCGGCCAAGAT‑AAGTTCAGCTAGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTccc                                                                                                                                          >  1:2341818/1‑150 (MQ=255)
            ccTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTccc                                                                                                                                          >  1:2394783/1‑150 (MQ=255)
              ttCGCACCTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCcac                                                                                                                                        >  2:1306281/1‑150 (MQ=255)
                  cAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGCTCTTTGCGGCGGCGCTGAAGACCTC‑GGGCCGCTTGGCGGTCGGGTGGCAACACAAGGCTGTTCCCACagag                                                                                                                                    <  2:1835326/150‑1 (MQ=37)
                  cAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACAcaag                                                                                                                                                   >  2:851770‑M2/1‑131 (MQ=255)
                  cAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACagag                                                                                                                                    <  2:1077058/150‑1 (MQ=255)
                   aaCTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAgg                                                                                                                                   >  2:1966048/1‑150 (MQ=255)
                    aCTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGt                                                                                                                                  <  2:2074389/150‑1 (MQ=255)
                      tCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACAcaa                                                                                                                                                    <  2:2351845‑M2/130‑4 (MQ=255)
                            cccAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GATCCATAGCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCa                                                                                                                          <  1:1376602/150‑1 (MQ=38)
                              cAGAGATCACACAATTCCTGCGGGCGCGGCCTTGCGTCGCGATAGAGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGCCCGCGCCAgg                                                                                                                        >  2:69205/1‑149 (MQ=255)
                              cAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGt                                                                                                                        >  2:2334257/1‑150 (MQ=255)
                              cAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTATGCCGCGGAGCTGAGGACCTG‑GGGCCTCTTCGCGGCCCATTCCCGACACAAGGCCGTTGCCACAGAGGGCCCGGCCAGt                                                                                                                        >  2:507941/1‑150 (MQ=37)
                                  gaTCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCa                                                                                                                    <  1:1806810/150‑1 (MQ=255)
                                   aTCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAg                                                                                                                   >  2:3580/1‑150 (MQ=255)
                                    tCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAga                                                                                                                  <  2:791810/150‑1 (MQ=255)
                                      acacaATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAgatg                                                                                                                >  1:2152887/1‑150 (MQ=255)
                                       cacaATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAgatga                                                                                                               <  2:2217839/150‑1 (MQ=255)
                                       cacaATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAgatga                                                                                                               <  2:1546879/150‑1 (MQ=255)
                                        acaATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAgatgat                                                                                                              >  2:2090894/1‑150 (MQ=255)
                                        acaATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATAATTGAGGCGGAGCAGCAGAGTAC‑TAAACAAAACCAGCCCCTTTCGCGACACAAGGCCGTTCCCACAGAGGTCAGCGCAAGGTGCAgatgat                                                                                                              >  1:1151202/1‑150 (MQ=16)
                                         caATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGAtt                                                                                                             <  1:1595014/150‑1 (MQ=255)
                                         caATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGAtt                                                                                                             <  2:2394783/150‑1 (MQ=255)
                                          aaTTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGAttt                                                                                                            <  2:14314/150‑1 (MQ=255)
                                          aaTTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGAttt                                                                                                            <  2:887242/150‑1 (MQ=255)
                                            ttCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGc                                                                                                                     >  1:819890/1‑139 (MQ=255)
                                            ttCCCGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGc                                                                                                          <  1:1002532/150‑1 (MQ=255)
                                              ccTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGAACTTTGCGGCGGAGCTGAAGACCAG‑GGGCCGCTTCGCGCCCCATTCGGGACAAAAGGCCGGTCCCACAGAGGTCCGGGCCAGTTGCAGATGATTTTCCa                                                                                                        >  1:1193741/1‑150 (MQ=38)
                                                tGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGt                                                                                                      >  2:551708/1‑150 (MQ=255)
                                                        cGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATG‑GTTGCCAGTCAGCCGAAc                                                                                             <  2:115117/150‑1 (MQ=255)
                                                          gCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACa                                                                                            >  1:2105281/1‑150 (MQ=255)
                                                           ccTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGTCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCAATGATGACACAAGGGCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAg                                                                                           >  1:1747759/1‑150 (MQ=255)
                                                           ccTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACAcaaggccgctcccgcaggaattgtgtgatctctgggaaatgagttgcgaaggctggcacc                                                                                           <  1:2344530‑M2/150‑61 (MQ=255)
                                                           ccTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCca                                                                                                                                         >  2:1388281/1‑104 (MQ=255)
                                                           ccTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCca                                                                                                                                         <  1:1388281/104‑1 (MQ=255)
                                                           ccTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGAttt                                                                                                            <  1:1787476/133‑1 (MQ=255)
                                                           ccTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGAttt                                                                                                            >  2:1787476/1‑133 (MQ=255)
                                                           ccTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAg                                                                                           <  2:2101579/150‑1 (MQ=255)
                                                             ttGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACAcaaggccgctcccgcaggaattgtgtgatctctgggaaatgagttgcgaaggctggcacctt                                                                                         <  1:249940‑M2/150‑63 (MQ=255)
                                                             ttGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACAcaaggccgctcccgcaggaatt                                                                                                                                 >  1:825573‑M2/1‑88 (MQ=255)
                                                             ttGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGc                                                                                         >  1:545576/1‑150 (MQ=255)
                                                             ttGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCAGTCGCGACACAAGGACGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGc                                                                                         >  2:1771831/1‑150 (MQ=255)
                                                             ttGCGTCGCGATAGGGCAGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACAcaaggccgctcccgcaggaatt                                                                                                                                 <  2:825573‑M2/110‑23 (MQ=255)
                                                               gCGTCGCGATACGGCCGCAGAGCGGCCCCGGCGATCGAGGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTg                                                                                       <  1:737224/150‑1 (MQ=255)
                                                                    gcgATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTc                                                                                  >  1:283069/1‑150 (MQ=255)
                                                                      gATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGGCCCTATCGCGACGcaaggccgctcccgcaggaattgtgt                                                                                                                             <  2:1486390‑M2/105‑27 (MQ=255)
                                                                      gATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGGCCCTATCGCGACGcaaggccgctcccgcaggaattgtgt                                                                                                                             >  1:1486390‑M2/1‑79 (MQ=255)
                                                                       aTAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACAcaaggccgctcccgcaggaattgtgtgatctctgggaaatgagttgcgaaggctggcacctttgttgcttta                                                                               >  2:249940‑M2/1‑78 (MQ=255)
                                                                         aGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGt                                                                             <  2:2220872/150‑1 (MQ=255)
                                                                         aGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGt                                                                             <  1:104653/150‑1 (MQ=255)
                                                                           ggCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGaa                                                                                              <  2:752328/131‑1 (MQ=255)
                                                                           ggCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGaa                                                                                              >  1:752328/1‑131 (MQ=255)
                                                                             ccGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCa                                                                                                    <  1:1087887/123‑1 (MQ=255)
                                                                                  gagCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACAcaaggccgctcccgcaggaattgtgtgatctctgggaaatgagttgcgaaggctggcacctttgttgctttaggtaggtcatt                                                                    >  2:2344530‑M2/1‑67 (MQ=255)
                                                                                   agCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGc                                                                   <  1:2311997/150‑1 (MQ=255)
                                                                                           cGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTCGCCTCGACGTCAAACCCGGCAGCGCGCa                                                           >  2:876344/1‑150 (MQ=255)
                                                                                                aTCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGAGTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTgc                                                      <  2:1561896/150‑1 (MQ=255)
                                                                                                aTCTTGGCGGCGGAGCTGAAGACCTG‑GGCCCCCTTCGCGCCCCATTCGCTACACAAGGCCGTTCCAACAGACGTCCGTGCCATTTTCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATGGCGCATCTgc                                                      <  2:960208/150‑1 (MQ=255)
                                                                                                  cTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTgcgc                                                    <  1:1094930/150‑1 (MQ=255)
                                                                                                   tttGCGGCGGAGCTGAAGACCTG‑GGGCCGCTCTGCGCCCCCCTCGCGACACGTGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGcc                                                   <  1:1967406/150‑1 (MQ=255)
                                                                                                         gcggAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAAc                                                                                             <  1:134099/102‑1 (MQ=255)
                                                                                                           ggAGCTGAAGACCTG‑GGGCCCCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGTTGATTTGCCAGTCAGCCGAACAGGCTGGCATCGTGGGTTACCCCCGCATCGCGCATCTGCGCCAGCTTGTa                                           <  1:1999869/150‑1 (MQ=255)
                                                                                                            gAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAg                                          >  1:1145574/1‑150 (MQ=255)
                                                                                                             aGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAgc                                         <  1:970639/150‑1 (MQ=255)
                                                                                                                tGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCa                                      >  1:1392680/1‑150 (MQ=255)
                                                                                                                tGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACACGGCATCGCGCATCTGCGCCAGCTTGTAGCGCa                                      >  1:876833/1‑150 (MQ=255)
                                                                                                                 gAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGACGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCaa                                     >  2:1156386/1‑150 (MQ=255)
                                                                                                                  aaGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAAc                                    >  1:593226/1‑150 (MQ=255)
                                                                                                                       cTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCa                                                                                                                          <  1:2151020/59‑1 (MQ=255)
                                                                                                                       cTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCa                                                                                                                          >  2:2151020/1‑59 (MQ=255)
                                                                                                                       cTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCcg                               >  2:1777597/1‑150 (MQ=255)
                                                                                                                        tG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCcgc                              >  1:353118/1‑150 (MQ=255)
                                                                                                                        tG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCcgc                              >  2:1129738/1‑150 (MQ=255)
                                                                                                                        tG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTGCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCcgc                              <  1:507941/150‑1 (MQ=255)
                                                                                                                             gCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGAc                          <  2:2096714/150‑1 (MQ=255)
                                                                                                                             gCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGAc                          >  1:786122/1‑150 (MQ=255)
                                                                                                                             gCCGCTTCGCGCCCCATTCCCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGAc                          <  2:1584717/150‑1 (MQ=255)
                                                                                                                              ccGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACt                         >  1:122881/1‑150 (MQ=255)
                                                                                                                                gCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGa                       >  1:637377/1‑150 (MQ=255)
                                                                                                                                 cTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAgg                                                                                          >  1:1121459/1‑82 (MQ=255)
                                                                                                                                 cTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAgg                                                                                          <  2:1121459/82‑1 (MQ=255)
                                                                                                                                 cTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGAt                      <  2:545576/150‑1 (MQ=255)
                                                                                                                                  ttCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATcgc                                                              <  2:39593/109‑1 (MQ=255)
                                                                                                                                  ttCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATcgc                                                              >  1:39593/1‑109 (MQ=255)
                                                                                                                                    cgcgCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGt                                  >  2:1279450/1‑135 (MQ=255)
                                                                                                                                    cgcgCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGt                                  <  1:1279450/135‑1 (MQ=255)
                                                                                                                                    cgcgCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATccc                   <  1:1306281/150‑1 (MQ=255)
                                                                                                                                      cgcCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCa                 <  2:2407924/150‑1 (MQ=255)
                                                                                                                                      cgcCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCa                 >  1:1663278/1‑150 (MQ=255)
                                                                                                                                         cccATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGc              <  1:299892/150‑1 (MQ=255)
                                                                                                                                           cATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGt            >  2:1970824/1‑150 (MQ=255)
                                                                                                                                           cATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGt            >  1:1969395/1‑150 (MQ=255)
                                                                                                                                           cATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGt            >  1:424630/1‑150 (MQ=255)
                                                                                                                                              tCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCg         <  2:2105281/150‑1 (MQ=255)
                                                                                                                                                gcgACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGgc       <  2:1193741/150‑1 (MQ=255)
                                                                                                                                                 cgACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGgcc      <  1:1502165/150‑1 (MQ=255)
                                                                                                                                                     acaAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCct  >  1:2364957/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTG‑GGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGGCTGGCCTCGACGTCAAACCCGGCATCGCGCATCTGCGCCAGCTTGTAGCGCAACGTCCGCGGACTGATCCCCAGGCGTTCGGCCGCCT  >  NC_002947/4960930‑4961227

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.