New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3400640	57 (0.640)	8 (0.100)	8/234	NT	11.8%	intergenic (‑28/+76)	PP_3006/PP_3007	ECF family RNA polymerase sigma‑70 factor/hypothetical protein
	?	NC_002947	= 3400664	65 (0.770)					intergenic (‑52/+52)	PP_3006/PP_3007	ECF family RNA polymerase sigma‑70 factor/hypothetical protein

CTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCGTGCAGTCGACTGACGGCGCCACACCGC  >  NC_002947/3400516‑3400813                                                                                                                                                     |                                                                                                                                                      cTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGc                                                                                                                                                      <  2:1942810‑M2/150‑2 (MQ=255)     gTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGNCNTNCTTGTGTAAGGCAANNACCCCGGCCATCCAGCCGGGGGGcttgc                                                                                                                                                  >  1:1460277‑M2/1‑145 (MQ=255)     gTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGcttgc                                                                                                                                                  >  1:1942810‑M2/1‑145 (MQ=255)         tCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATc                                                                                                                                              <  1:2212835/150‑1 (MQ=255)            tAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAg                                                                                                                                           >  2:2009894/1‑150 (MQ=255)            tAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGAAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAg                                                                                                                                           >  1:1083155/1‑150 (MQ=255)             agagCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGc                                                                                                                                          <  2:224324/150‑1 (MQ=255)                gcgcCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTa                                                                                                                                       >  1:493804/1‑150 (MQ=255)                gcgcCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTa                                                                                                                                       <  2:493804/150‑1 (MQ=255)                   ccTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGat                                                                                                                                    <  1:906691/150‑1 (MQ=255)                    cTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTCCTTCAGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGatc                                                                                                                                   >  1:22920/1‑150 (MQ=255)                     tGCAGGGCCCGTCGGTCACCCGGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGatca                                                                                                                                  <  2:279653/150‑1 (MQ=255)                                   gTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCg                                                                                                                    >  1:1193925/1‑150 (MQ=255)                                          tgtgCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTc                                                                                                             >  2:2341975/1‑150 (MQ=255)                                            tgCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCgg                                                                                                           <  2:1193925/150‑1 (MQ=255)                                            tgCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCgg                                                                                                           <  1:1115713/150‑1 (MQ=255)                                                  ggCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTCCCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCgt                                                                                                     <  2:2169608/150‑1 (MQ=255)                                                  ggCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCATAGGGTCGGGTGCgt                                                                                                     <  1:1532452/150‑1 (MQ=255)                                                  ggCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGCAGACGTTCCAGCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCgt                                                                                                     <  1:1642247/150‑1 (MQ=255)                                                      aaCAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCa                                                                                                 <  2:2105346/150‑1 (MQ=255)                                                             aGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGAACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGATGGGGGGGTGTGACTTGGCt                                                                                          >  2:136683/1‑150 (MQ=255)                                                              gCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTg                                                                                         <  1:1657755/150‑1 (MQ=255)                                                                ggTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTc                                                                                       <  1:136683/150‑1 (MQ=255)                                                                             gggggCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGt                                                                          <  1:1206133/150‑1 (MQ=255)                                                                                 gcggcCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAg                                                                                                                 >  2:1175551/1‑107 (MQ=255)                                                                                 gcggcCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAg                                                                                                                 <  1:1175551/107‑1 (MQ=255)                                                                                 gcggcCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGc                                                                      <  2:278064/150‑1 (MQ=255)                                                                                      cggcGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTc                                                                                       <  1:339589/128‑1 (MQ=255)                                                                                      cggcGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGt                                                                 <  2:1795382/150‑1 (MQ=255)                                                                                      cggcGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCAGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTc                                                                                       >  2:339589/1‑128 (MQ=255)                                                                                       ggcGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTa                                                                >  1:2366021/1‑150 (MQ=255)                                                                                               cAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAg                                                                                                                                      >  1:2356698/1‑72 (MQ=255)                                                                                               cAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAg                                                                                                                                      <  2:2356698/72‑1 (MQ=255)                                                                                               cAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTgg                                                                                            >  2:501617/1‑114 (MQ=255)                                                                                               cAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTgg                                                                                            <  1:501617/114‑1 (MQ=255)                                                                                                aaCGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGgacgac                                                       >  1:1239324/1‑150 (MQ=255)                                                                                                   gtgtgtGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTc                                                                                       >  2:73752/1‑115 (MQ=255)                                                                                                   gtgtgtGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTc                                                                                       <  1:73752/115‑1 (MQ=255)                                                                                                   gtgtgtGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGAcctg                                                    >  1:417446/1‑150 (MQ=255)                                                                                                        tgGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCCTCGAGCTTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTgg                                               >  2:537002/1‑150 (MQ=255)                                                                                                        tgGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTgg                                               >  1:1410056/1‑150 (MQ=255)                                                                                                        tgGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTAGTACTGGACGACCTGCCTgg                                               <  2:1752069/150‑1 (MQ=255)                                                                                                          gCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCa                                             <  1:2347272/150‑1 (MQ=255)                                                                                                            ttCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTc                                                                                       <  2:2292656/106‑1 (MQ=255)                                                                                                            ttCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTc                                                                                       >  1:2292656/1‑106 (MQ=255)                                                                                                               cTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCttt                                        <  1:2009894/150‑1 (MQ=255)                                                                                                               cTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCttt                                        <  2:2361058/150‑1 (MQ=255)                                                                                                                   tgtAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTc                                    >  1:1672409/1‑150 (MQ=255)                                                                                                                    gtAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCt                                   >  1:239609/1‑150 (MQ=255)                                                                                                                     tAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTg                                  >  1:582992/1‑150 (MQ=255)                                                                                                                     tAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGGCGGGTGCGTGTCACTTGGCTGTCCAGAACACATCGTCAGCCTGGTACTGGACGACCTGCCTGGCCCCtttctgctc                                  >  1:136488/1‑144 (MQ=255)                                                                                                                      aaGGCAAGTACCCCGGCCATCCAGCCGGGGGGcttgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttagcctgt                                                                        >  2:1433564‑M2/1‑32 (MQ=255)                                                                                                                      aaGGCAAGTACCCCGGCCATCCAGCCGGGGGGcttgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttagcctgt                                                                        <  1:1433564‑M2/111‑80 (MQ=255)                                                                                                                      aaGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGACCACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTgc                                 <  1:74882/150‑1 (MQ=255)                                                                                                                       aGGCAAGTACCCCGGCCATCCAGCCGGGGTActtgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttagcctgtgcacagggtgaccgacgggccctgcaggcgctctacgatc                                <  1:822519‑M2/150‑120 (MQ=255)                                                                                                                        ggCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGc                                                                                                                     >  2:845739/1‑64 (MQ=255)                                                                                                                        ggCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGc                                                                                                                     <  1:845739/64‑1 (MQ=255)                                                                                                                          cAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCg                             >  2:1146689/1‑150 (MQ=255)                                                                                                                           aaGTACCCCGGCCATCCAGCCGGGGGGcttgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcga                                                                                                 <  2:1691114‑M2/81‑55 (MQ=255)                                                                                                                           aaGTACCCCGGCCATCCAGCCGGGGGGcttgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcga                                                                                                 >  1:1691114‑M2/1‑27 (MQ=255)                                                                                                                           aaGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCGt                            <  2:1410056/150‑1 (MQ=255)                                                                                                                           aaGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCGt                            <  2:78275/150‑1 (MQ=255)                                                                                                                           aaGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGCGAGAGTGGCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTCCTGGACGACCTGCCTGGCACCTTTGTTCtaagccaa                            >  2:694496/1‑143 (MQ=255)                                                                                                                             gTACCCCGGCCATCCAGCCGGGGGGcttgccttacacagggaagccacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttagcctgtg                                                                       <  2:1389375‑M2/105‑81 (MQ=255)                                                                                                                             gTACCCCGGCCATCCAGCCGGGGGGcttgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttagcctgtg                                                                       >  1:1389375‑M2/1‑25 (MQ=255)                                                                                                                             gTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTa                                                                <  2:1401122/112‑1 (MQ=255)                                                                                                                             gTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTa                                                                >  1:1401122/1‑112 (MQ=255)                                                                                                                               aCCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCGTGCAg                        >  1:298311/1‑150 (MQ=255)                                                                                                                                  ccGGCCATCCAGCCGGGGTActtgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttagcctgtgcacagggtgaccgacgggccctgcaggcgctctacgatcacgaaggcgcg                     <  1:1802586‑M2/150‑131 (MQ=255)                                                                                                                                  ccGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACtt                                                                                              >  1:144725/1‑77 (MQ=255)                                                                                                                                  ccGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACtt                                                                                              <  2:144725/77‑1 (MQ=255)                                                                                                                                   cGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTAACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCGTGCAGTCGa                    <  1:1965845/150‑1 (MQ=255)                                                                                                                                        aTCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCGTGCAGTCGACTGAc               <  2:2143071/150‑1 (MQ=255)                                                                                                                                         tCCAGGCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCGTGCAGTCGACTGACg              >  1:1059185/1‑150 (MQ=255)                                                                                                                                         tCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCGTGCAGTCGACTGACg              >  1:1535683/1‑150 (MQ=255)                                                                                                                                         gatggCCGGGGTGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTgg                                               >  2:491421/5‑117 (MQ=255)                                                                                                                                         gatggCCGGGGTGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTgg                                               <  1:491421/113‑1 (MQ=255)                                                                                                                                                     gCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCGTGCAGTCGACTGACGGCGCCACAccgc  <  2:298311/150‑1 (MQ=255)                                                                                                                                                     gCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCGTGCAGTCGACTGACGGCGCCACAccgc  <  1:1146689/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCGTGCAGTCGACTGACGGCGCCACACCGC  >  NC_002947/3400516‑3400813

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.