| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3400640 | 57 (0.640) | 8 (0.100) | 8/234 | NT | 11.8% | intergenic (‑28/+76) | PP_3006/PP_3007 | ECF family RNA polymerase sigma‑70 factor/hypothetical protein |
| ? | NC_002947 | = 3400664 | 65 (0.770) | intergenic (‑52/+52) | PP_3006/PP_3007 | ECF family RNA polymerase sigma‑70 factor/hypothetical protein | |||||
AACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCGTGC > NC_002947/3400496‑3400789 | aaCGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTAccc > 1:1154924/1‑150 (MQ=255) aCGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTAccc > 1:1982203/1‑149 (MQ=255) aCGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTAccc < 2:1982203/149‑1 (MQ=255) cGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCg < 2:1154924/150‑1 (MQ=255) ccAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGcc > 2:1206133/1‑150 (MQ=255) gcagGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATc < 2:2101455/150‑1 (MQ=255) ggCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTCAGGCAAGTACCCCGGCCATCCAg > 2:74882/1‑150 (MQ=255) gcgcgcgcCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGc > 1:224324/1‑150 (MQ=255) cgcgcCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAATGTGTGTGGCTTCCTTGTGTAAGGCAAGTCCCCCGGCCATCCAGCCgg < 2:711873/150‑1 (MQ=255) cgcgcCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGtaccccggctggatggccgg < 1:1802586‑M1/150‑21 (MQ=255) cTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGc < 2:1942810‑M2/150‑2 (MQ=255) gTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGNCNTNCTTGTGTAAGGCAANNACCCCGGCCATCCAGCCGGGGGGcttgc > 1:1460277‑M2/1‑145 (MQ=255) gTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGcttgc > 1:1942810‑M2/1‑145 (MQ=255) gATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGtaccccggctggatggccggggtacttgcct < 1:822519‑M1/150‑32 (MQ=255) tCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATc < 1:2212835/150‑1 (MQ=255) tAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAg > 2:2009894/1‑150 (MQ=255) tAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGAAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAg > 1:1083155/1‑150 (MQ=255) agagCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGc < 2:224324/150‑1 (MQ=255) gcgcCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTa > 1:493804/1‑150 (MQ=255) gcgcCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTa < 2:493804/150‑1 (MQ=255) ccTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGat < 1:906691/150‑1 (MQ=255) cTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTCCTTCAGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGatc > 1:22920/1‑150 (MQ=255) tGCAGGGCCCGTCGGTCACCCGGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGatca < 2:279653/150‑1 (MQ=255) gTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCg > 1:1193925/1‑150 (MQ=255) tgtgCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTc > 2:2341975/1‑150 (MQ=255) tgCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCgg < 1:1115713/150‑1 (MQ=255) tgCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCgg < 2:1193925/150‑1 (MQ=255) cacaGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGccccccggctggatggccggggtac > 1:1389375‑M1/1‑80 (MQ=255) cacaGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCCTGTGTAAGGCAAGccccccggctggatggccggggtac < 2:1389375‑M1/105‑26 (MQ=255) acaGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGccccccggctggatggccggggtacttgcctt < 1:1433564‑M1/111‑33 (MQ=255) acaGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGccccccggctggatggccggggtacttgcctt > 2:1433564‑M1/1‑79 (MQ=255) ggCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTCCCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCgt < 2:2169608/150‑1 (MQ=255) ggCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCATAGGGTCGGGTGCgt < 1:1532452/150‑1 (MQ=255) ggCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGCAGACGTTCCAGCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCgt < 1:1642247/150‑1 (MQ=255) aaCAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCa < 2:2105346/150‑1 (MQ=255) aGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGAACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGATGGGGGGGTGTGACTTGGCt > 2:136683/1‑150 (MQ=255) gCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTg < 1:1657755/150‑1 (MQ=255) ggTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTc < 1:136683/150‑1 (MQ=255) tCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGccccccggctggatggccggggtactt < 2:1691114‑M1/81‑28 (MQ=255) tCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGccccccggctggatggccggggtactt > 1:1691114‑M1/1‑54 (MQ=255) gggggCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGt < 1:1206133/150‑1 (MQ=255) gcggcCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAg > 2:1175551/1‑107 (MQ=255) gcggcCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAg < 1:1175551/107‑1 (MQ=255) gcggcCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGc < 2:278064/150‑1 (MQ=255) cggcGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTc < 1:339589/128‑1 (MQ=255) cggcGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGt < 2:1795382/150‑1 (MQ=255) cggcGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCAGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTc > 2:339589/1‑128 (MQ=255) ggcGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTa > 1:2366021/1‑150 (MQ=255) cAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAg < 2:2356698/72‑1 (MQ=255) cAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAg > 1:2356698/1‑72 (MQ=255) cAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTgg < 1:501617/114‑1 (MQ=255) cAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTgg > 2:501617/1‑114 (MQ=255) aaCGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGgacgac > 1:1239324/1‑150 (MQ=255) gtgtgtGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTc > 2:73752/1‑115 (MQ=255) gtgtgtGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTc < 1:73752/115‑1 (MQ=255) gtgtgtGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGAcctg > 1:417446/1‑150 (MQ=255) tgGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCCTCGAGCTTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTgg > 2:537002/1‑150 (MQ=255) tgGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTgg > 1:1410056/1‑150 (MQ=255) tgGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTAGTACTGGACGACCTGCCTgg < 2:1752069/150‑1 (MQ=255) gCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCa < 1:2347272/150‑1 (MQ=255) ttCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTc > 1:2292656/1‑106 (MQ=255) ttCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTc < 2:2292656/106‑1 (MQ=255) cTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCttt < 2:2361058/150‑1 (MQ=255) cTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCttt < 1:2009894/150‑1 (MQ=255) tgtAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTc > 1:1672409/1‑150 (MQ=255) gtAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCt > 1:239609/1‑150 (MQ=255) tAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTg > 1:582992/1‑150 (MQ=255) tAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGGCGGGTGCGTGTCACTTGGCTGTCCAGAACACATCGTCAGCCTGGTACTGGACGACCTGCCTGGCCCCtttctgctc > 1:136488/1‑144 (MQ=255) aaGGCAAGTACCCCGGCCATCCAGCCGGGGGGcttgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttagcctgt < 1:1433564‑M2/111‑80 (MQ=255) aaGGCAAGTACCCCGGCCATCCAGCCGGGGGGcttgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttagcctgt > 2:1433564‑M2/1‑32 (MQ=255) aaGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGACCACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTgc < 1:74882/150‑1 (MQ=255) aGGCAAGTACCCCGGCCATCCAGCCGGGGTActtgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttagcctgtgcacagggtgaccgacgggccctgcaggcgctctacgatc < 1:822519‑M2/150‑120 (MQ=255) ggCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGc > 2:845739/1‑64 (MQ=255) ggCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGc < 1:845739/64‑1 (MQ=255) gCAAGccccccggctggatggccggggtnnttgccttacacaagnangncacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttagcctgtgcacagggtgaccgacgggccctgcaggcgctctacgatcac > 1:1460277‑M1/1‑5 (MQ=255) gCAAGccccccggctggatggccggggtacttgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttagcctgtgcacagggtgaccgacgggccctgcaggcgctctacgatcac > 1:1942810‑M1/1‑5 (MQ=255) cAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCg > 2:1146689/1‑150 (MQ=255) aaGTACCCCGGCCATCCAGCCGGGGGGcttgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcga < 2:1691114‑M2/81‑55 (MQ=255) aaGTACCCCGGCCATCCAGCCGGGGGGcttgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcga > 1:1691114‑M2/1‑27 (MQ=255) aaGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCGt < 2:1410056/150‑1 (MQ=255) aaGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCGt < 2:78275/150‑1 (MQ=255) aaGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGCGAGAGTGGCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTCCTGGACGACCTGCCTGGCACCTTTGTTCtaagccaa > 2:694496/1‑143 (MQ=255) gccccccggctggatggccggggtacttgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttagcctgtgcacagggtgaccgacgggccctgcaggcgctctacgatcacgaag < 2:1942810‑M1/150‑150 (MQ=255) gTACCCCGGCCATCCAGCCGGGGGGcttgccttacacagggaagccacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttagcctgtg < 2:1389375‑M2/105‑81 (MQ=255) gTACCCCGGCCATCCAGCCGGGGGGcttgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttagcctgtg > 1:1389375‑M2/1‑25 (MQ=255) gTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTa > 1:1401122/1‑112 (MQ=255) gTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTa < 2:1401122/112‑1 (MQ=255) | AACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGCCATCCAGCCGGGGGGCTTGCCATCGAGCGTAGATCATCACTCGCAGGGCGTAGGGTCGGGTGCGTGTCACTTGGCTGTCCAGAACACATAGTCAGCCTGGTACTGGACGACCTGCCTGGCACCTTTGTTCTGCGCCGTGC > NC_002947/3400496‑3400789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |