| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6137631 | 106 (1.200) | 6 (0.070) | 6/236 | NT | 5.7% | coding (30/1254 nt) | czcC | CzcC family metal RND transporter outer membrane protein |
| ? | NC_002947 | = 6137641 | 97 (1.140) | coding (40/1254 nt) | czcC | CzcC family metal RND transporter outer membrane protein | |||||
TCCCCCCGATCACTGGCGCCCTCCTCGCGCCTGATTCCTTCGTAAAACTCACACCATTGTTCTGCCTCGGCGGCTGAACGATGACACGCGCCTGTGCGCTGGTTTTTTCGAGGAATCATCTCCATGACTCCCCTATGCTCCCATTCAGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6137479‑6137631‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggCAGCAAGCATCCGCCCTGAATGGGAGCATAGGGGAGTCATGGAGATGATTCCTCGAAAAAACCAGCGCACAGGCGCGTGTCATCGTTCAGCCGCCGAGGCAGAACAATGGTGTGAGTTTTACGAAGGAATCAGGCGCGAGGAGGGC < NC_002947/6137641‑6137496 TCCCCCCGATCACTGGCGCCCTCCTCGCGCCTGATTCCTTCGTAAAACTCACACCATTGTTCTGCCTCGGCGGCTGAACGATGACACGCGCCTGTGCGCTGGTTTTTTCGAGGAATCATCTCCATGACTCCCCTATGCTCCCATTCAGGG < 2:909001/150‑1TCCCCCCGATCACTGGCGCCCTCCTCGCGCCTGATTCCTTCGTAAAACTCACACCATTGTTCTGCCTCGGCGGCTGAACGATGACACGCGCCTGTGCGCTGGTTTTTTCGAGGAATCATCTCCATGACTCCCCTATGCTCCCATTCAAGG < 2:490587/150‑1 CCCCCCGATCACTGGCGCCCTCCTCGCGCCTGATTCCTTCGTAAAACTCACACCATTGTTCTGCCTCGGCGGCTGAACGATGACACGCGCCTGTGCGCTGGTTTTTTCGAGGAATCATCTCCATGACTCCCCTATGCTCCCATTCAGGGC < 1:1470784/150‑1 CCCCCCGATCACTGGCGCCCTCCTCGCGCCTGATTCCTTCGTAAAACTCACACCATTGTTCTGCCTCGGCGGCTGAACGATGACACGCGCCTGTGCGCTGGTTTTTTCGAGGAATCATCTCCATGACTCCCCTATGCTCCCATTCAGGGC < 2:652599/150‑1 CCCCCGATCACTGGCGCCCTCCTCGCGCCTGATTCCTTCGTAAAACTCACACCATTGTTCTGCCTCGGCGGCTGAACGATGACACGCGCCTGTGCGCTGGTTTTTTCGAGGAATCATCTCCATGACTCCCCTATGCTCCCATTCAGGGCG > 1:1517837/1‑150 CTCCTCGCGCCTGATTCCTTCGTAAAACTCACACCATTGCTCTGCCTCGGCGGCTGAACGATGACACGCGCCTGTGCGCTGGTTTTTTCGAGGAATCATCTCCATGACTCCCCTATGCTCCCATTCAGGGCGGCAGCAAGCATCCGCC > 1:2253105/1‑148 CTCCTCGCGCCTGATTCCTTCGTAAAACTCACACCATTGCTCTGCCTCGGCGGCTGAACGATGACACGCGCCTGTGCGCTGGTTTTTTCGAGGAATCATCTCCATGACTCCCCTATGCTCCCATTCAGGGCGGCAGCAAGCATCCGCC < 2:2253105/148‑1 TGAACGATGACACGCGCCTGTGCGCTGGTTTTTTCGAGGAATCATCTCCATGACTCCCCTATGCTCCCATTCAGGGCGGCAGCAAGCATCCGCCCTGAA < 1:1575501/99‑1 TGAACGATGACACGCGCCTGTGCGCTGGTTTTTTCGAGGAATCATCTCCATGACTCCCCTATGCTCCCATTCAGGGCGGCAGCAAGCATCCGCCCTGAA > 2:1575501/1‑99 GCTGGTTTTTTCGAGGAATCATCTCCATGACTCCCCTATGCTCCCATTCAGGGCGGCAGCAAGCATCCGCCCTGAATG > 1:1240837/1‑78 GCTGGTTTTTTCGAGGAATCATCTCCATGACTCCCCTATGCTCCCATTCAGGGCGGCAGCAAGCATCCGCCCTGAATG < 2:1240837/78‑1 agggGGCAGCAAGCATCCGCCCTGAATGGGAGCATAGGGGAGTCATGGAGATGATTCCTCGAAAAAACCAGCGCACAGGCGCGTGTCATCGTTCAGCCGCCGAGGCAGAACAATGGTGTGAGTTTTACGAAGGAATCAGGCGCGAGGAGG < 2:775242/146‑1 GGCGGCAGCAAGCATCCGCCCTGAATGGGAGCATAGGGGAGTCATGGAGATGATTCCTCGAAAAAACCAGCGCACAGGCGCGTGTCATCGTTCAGCCGCCGAGGCAGAACAATGGTGTGAGTTTTACGAAGGAATCAGGCGCGAGGAGGG < 1:955658/150‑1 GCGGCAGTAAGCATCCGCCCTGAATGGGAGCATAGGGGAGTCATGGAGATGATTCCTCGAAAAAACCAGCGCACAGGCGCGTGTCATCGTTCAGCCGCCGAGGCAGAACAATGGTGTGAGTTTTACGAAGGAATCAGGCGCGAGGAGGGC < 2:2184471/150‑1 GCGGCAGCAAGCATCCGCCCTGAATGGGAGCATAGGGGAGTCATGGAGATGATTCCTCGAAAAAACCAGCGCACAGGCGCGTGTCATCGTTCAGCCGCCGAGGCAGAACAATGGTGTGAGTTTTACGAAGGAATCAGGCGCGAGGAGGGC < 1:2124796/150‑1 GCGGCAGCAAGCATCCGCCCTGAATGGGAGCATAGGGGAGTCATGGAGATGATTCCTCGAAAAAACCAGCGCACAGGCGCGTGTCATCGTTCAGCCGCCGAGGCAGAACAATGGTGTGAGTTTTACGAAGGAATCAGGCGCGAGGAGGGC < 2:2183506/150‑1 TCCCCCCGATCACTGGCGCCCTCCTCGCGCCTGATTCCTTCGTAAAACTCACACCATTGTTCTGCCTCGGCGGCTGAACGATGACACGCGCCTGTGCGCTGGTTTTTTCGAGGAATCATCTCCATGACTCCCCTATGCTCCCATTCAGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6137479‑6137631‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggCAGCAAGCATCCGCCCTGAATGGGAGCATAGGGGAGTCATGGAGATGATTCCTCGAAAAAACCAGCGCACAGGCGCGTGTCATCGTTCAGCCGCCGAGGCAGAACAATGGTGTGAGTTTTACGAAGGAATCAGGCGCGAGGAGGGC < NC_002947/6137641‑6137496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |