BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2436708	103 (1.160)	5 (0.070) +TCGTTACAGAACAGATTGACCAGCCTGGAT	4/186	NT	6.8%	intergenic (+243/‑416)	PP_2134/fadB	transposase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase
*	?	NC_002947	= 3973164	79 (0.890)	5 (0.070) +TCGTTACAGAACAGATTGACCAGCCTGGAT	4/186	NT	6.8%	intergenic (+158/+27)	PP_3502/PP_3503	transposase/sigma‑54 dependent transcriptional regulator

Only 100 of 114 total aligned reads displayed.

TGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGACCGGCGATCACT  >  NC_002947/2436560‑2436852

tGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGTGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGc                                                                                                                                                 >  2:1507294/1‑150 (MQ=255)

tGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGc                                                                                                                                                 >  2:922216/1‑150 (MQ=255)

tGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGc                                                                                                                                                 >  1:1137831/1‑150 (MQ=255)

  agagagGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGt                                                                                                                                               >  1:1652417/1‑150 (MQ=255)

    agagGCCGATGTCATTTTTACTGAAAACTTTCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTc                                                                                                                                             <  1:1106927/150‑1 (MQ=255)

        gCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTctgct                                                                                                                                         >  1:1026523/1‑150 (MQ=255)

             tGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGTGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCTCCGCTTTGCGTTCTGCTGCGCa                                                                                                                                    <  1:1507294/150‑1 (MQ=255)

                cGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGaa                                                                                                                                 >  1:2359561/1‑150 (MQ=255)

                 gTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGaaa                                                                                                                                >  2:1104457/1‑150 (MQ=255)

                   ttttACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAg                                                                                                                              <  1:1218861/150‑1 (MQ=255)

                     ttACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGc                                                                                                                            <  2:1137831/150‑1 (MQ=255)

                       aCTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCca                                                                                                                          <  1:863699/150‑1 (MQ=255)

                         tGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTgcgc                                                                                                                                     <  2:1177324/137‑1 (MQ=255)

                          gAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCcaggc                                                                                                                       >  1:916701/1‑150 (MQ=255)

                            aaaTTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCcaggcag                                                                                                                     <  2:2359561/150‑1 (MQ=255)

                                ttGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCg                                                                                                                 <  1:1169110/150‑1 (MQ=255)

                                 tGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCTGCTCGGTCTCACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCgg                                                                                                                <  1:171585/150‑1 (MQ=255)

                                 tGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCgg                                                                                                                <  2:1026523/150‑1 (MQ=255)

                                    cTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGtt                                                                                                             >  2:1295874/1‑150 (MQ=255)

                                     tCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTa                                                                                                            <  2:1623472/150‑1 (MQ=255)

                                      ccGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTat                                                                                                           <  1:1295874/150‑1 (MQ=255)

                                      ccGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTat                                                                                                           <  2:1388854/150‑1 (MQ=255)

                                          ccATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTattcat                                                                                                       <  2:875602/150‑1 (MQ=255)

                                          ccATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTattcat                                                                                                       >  2:1793260/1‑150 (MQ=255)

                                            aTAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATGTGGTCTGTAACGACAAAGCGGCGGCTCGGCATGATCGTGAAGGGGCGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGAAGGGCGGAGcattcattt                                                                                                     >  1:1375033/1‑149 (MQ=255)

                                             tAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGTCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGTGCTAtccattca                                                                                                    >  2:790607/1‑150 (MQ=255)

                                             tAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTAttcattca                                                                                                    >  1:1192087/1‑150 (MQ=255)

                                              aGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTCCTGTGAAGCAAAATCGGCTGCTCGGCATAACCCTGACGGTGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTcaa                                                                                                   <  1:2341878/150‑1 (MQ=255)

                                                  tctcCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTcaagcaa                                                                                               <  2:1462572/150‑1 (MQ=255)

                                                     ccTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCTGGGTTattca                                                                                                        >  1:1444020/1‑138 (MQ=255)

                                                     ccTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCTGGGTTattca                                                                                                        <  2:1444020/138‑1 (MQ=255)

                                                      cTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCggg                                                                                                               >  1:2390421/1‑130 (MQ=255)

                                                      cTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCggg                                                                                                               <  2:2390421/130‑1 (MQ=255)

                                                       tACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGcc                                                                                          >  2:1914380/1‑150 (MQ=255)

                                                              gCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAACACGACAGTCACGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAg                                                                                   >  2:1771252/1‑150 (MQ=255)

                                                                    aGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCt                                                                             >  2:1582130/1‑150 (MQ=255)

                                                                     ggCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAG‑AAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTg                                                                           >  2:859429/1‑150 (MQ=255)

                                                                             aaTCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTcaa                                                                                                   >  1:469637/1‑119 (MQ=255)

                                                                             aaTCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCa                                                                                         <  2:1635961/129‑1 (MQ=255)

                                                                             aaTCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCa                                                                                         >  1:1635961/1‑129 (MQ=255)

                                                                             aaTCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTc                                                                    <  1:922216/150‑1 (MQ=255)

                                                                             aaTCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTc                                                                    <  2:1192087/150‑1 (MQ=255)

                                                                             aaTCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTc                                                                    <  2:458384/150‑1 (MQ=255)

                                                                             aaTCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTc                                                                    <  2:719515/150‑1 (MQ=255)

                                                                               tctgttctgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTcgc                                                                  <  2:213296/150‑1 (MQ=255)

                                                                               tctgttctgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTcgc                                                                  <  1:1914380/150‑1 (MQ=255)

                                                                                ctgttctgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCg                                                                                                                 >  2:514328/1‑102 (MQ=255)

                                                                                ctgttctgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCg                                                                                                                 <  1:514328/102‑1 (MQ=255)

                                                                                   ttctgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCcagg                                                                                                                        >  1:904200/1‑92 (MQ=255)

                                                                                   ttctgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCcagg                                                                                                                        <  2:904200/92‑1 (MQ=255)

                                                                                   ttctgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAgt                                                                                       >  1:823433/1‑125 (MQ=255)

                                                                                   ttctgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCgcgcaa                                                              >  2:352575/1‑150 (MQ=255)

                                                                                   ttctgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCgcgcaa                                                              >  1:15692/1‑150 (MQ=255)

                                                                                   ttctgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCgcgcaa                                                              >  2:1783628/1‑150 (MQ=255)

                                                                                      tgtAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCgcgcaag                                                             <  2:90788/148‑1 (MQ=255)

                                                                                        tAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGaaaa                                                                                                                               <  2:2039088/80‑1 (MQ=255)

                                                                                        tAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGaaaa                                                                                                                               >  1:2039088/1‑80 (MQ=255)

                                                                                        tAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCCGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCGCTTCgcgcaagcgca                                                         >  2:1678506/1‑150 (MQ=255)

                                                                                            gACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCACAAAGc                                                     >  1:2102989/1‑150 (MQ=255)

                                                                                               aaaGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCa                                                    >  2:703982/1‑148 (MQ=255)

                                                                                               aaaGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCa                                                    <  1:703982/148‑1 (MQ=255)

                                                                                                aaGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATa                                                 <  2:916701/150‑1 (MQ=255)

                                                                                                 aGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATaa                                                <  2:1974015/150‑1 (MQ=255)

                                                                                                  gcggcgGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAg                                               >  2:160190/1‑150 (MQ=255)

                                                                                                     gcggcTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAG‑AAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGa                                           <  1:859429/150‑1 (MQ=255)

                                                                                                      cggcTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGa                                           <  1:1039354/150‑1 (MQ=255)

                                                                                                       ggcTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGtcgttacagaacagattgaccagcctggatgcccccgtaggagattctatggccggaggcaaattttcag                                                                            >  1:111913‑M1/1‑46 (MQ=255)

                                                                                                       ggcTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGtcgttacagaacagattgaccagcctggatgcccccgtaggagattctatggccggaggcaaattttcag                                                                            <  2:111913‑M1/116‑71 (MQ=255)

                                                                                                       ggcTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGAt                                          >  1:1947858/1‑150 (MQ=255)

                                                                                                        gcTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGtcgttacagaacagattgaccagcctggatgcccccgtaggagattctatggccggaggcaaattttcagtaaaaacgccatcggcctctctca                                                    >  2:885507‑M1/1‑45 (MQ=255)

                                                                                                        gcTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGtcgttacagaacagattgaccagcctggatgcccccgtaggagattctatggccggaggcaaattttcagtaaaaacgccatcggcctctctca                                                    <  1:885507‑M1/139‑95 (MQ=255)

                                                                                                        gcTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGccgttacagaagagattgaccagcctggatgcccccgtaggagattctatggccggaggcaaattttcagtaaaaacgccatcgtcctctctcagcaacctcgag                                         >  2:1894140‑M1/1‑45 (MQ=255)

                                                                                                           cGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCtt                                      <  2:15692/150‑1 (MQ=255)

                                                                                                            ggCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTtg                                     >  2:405540/1‑150 (MQ=255)

                                                                                                              cATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTcaagcaa                                                                                               >  1:2161593/1‑90 (MQ=255)

                                                                                                              cATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTcaagcaa                                                                                               <  2:2161593/90‑1 (MQ=255)

                                                                                                              cATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTtgtg                                   <  2:325639/150‑1 (MQ=255)

                                                                                                                tAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGACTTAGCCCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGt                                 >  1:539682/1‑150 (MQ=255)

                                                                                                                   cccTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAg                                                                                        >  2:1303297/1‑92 (MQ=255)

                                                                                                                   cccTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAg                                                                                        <  1:1303297/92‑1 (MQ=255)

                                                                                                                    ccTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGt                                                                                                              >  2:1551642/1‑69 (MQ=255)

                                                                                                                     cTGAAGGGGTTGGGTGCCAAGTCGCTGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTTGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCattt                            >  2:1038915/1‑147 (MQ=255)

                                                                                                                      tGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGt                                 >  2:2342953/1‑144 (MQ=255)

                                                                                                                      tGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGt                                 <  1:2342953/144‑1 (MQ=255)

                                                                                                                        aaGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTgg                                                                          >  1:497015/1‑101 (MQ=255)

                                                                                                                        aaGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTgg                                                                          <  2:497015/101‑1 (MQ=255)

                                                                                                                               ggggtgCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCcaggcagg                                                                                                                    >  1:115897/1‑52 (MQ=255)

                                                                                                                               ggggtgCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACatga                  >  1:369123/1‑150 (MQ=255)

                                                                                                                                    gCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGAc             <  1:1104457/150‑1 (MQ=255)

                                                                                                                                     ccAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGAcc            >  2:2128413/1‑150 (MQ=255)

                                                                                                                                      cAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCaa                              >  2:778887/1‑131 (MQ=255)

                                                                                                                                      cAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCaa                              <  1:778887/131‑1 (MQ=255)

                                                                                                                                      cAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGACCg           >  2:1295659/1‑150 (MQ=255)

                                                                                                                                       aaGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGc                                                                               <  2:2191299/81‑1 (MQ=255)

                                                                                                                                       aaGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGc                                                                               >  1:2191299/1‑81 (MQ=255)

                                                                                                                                           cgccgcTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGACCGGCGAt      <  2:1828526/150‑1 (MQ=255)

                                                                                                                                              cgcTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGTGTTATTCATTCAAGCAAGTGCCAGTGTAg                                                                                   >  1:2289392/1‑70 (MQ=255)

                                                                                                                                              cgcTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAg                                                                                   <  2:2289392/70‑1 (MQ=255)

                                                                                                                                              cgcTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGACCGGCGATCAc   <  2:642505/150‑1 (MQ=255)

                                                                                                                                               gcTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGACCGGCGATCACt  >  1:2079227/1‑150 (MQ=255)

TGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGGCTCGGCATAACCCTGAAGGGGTGGGGTGCCAAGTCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGACCGGCGATCACT  >  NC_002947/2436560‑2436852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.