| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1237638 = | 77 (0.870) | 4 (0.050) | 4/230 | NT | 5.8% | coding (477/1110 nt) | PP_1078 | ABC transporter ATP‑binding protein |
| ? | NC_002947 | 1237695 = | 57 (0.690) | coding (420/1110 nt) | PP_1078 | ABC transporter ATP‑binding protein | |||||
AAACACCCACGCCAGGCGGCCGTCATCGAAGAGATGCTGGAGCTGGTCAAACTCGGCGGGCTGGGCGGGCGTTACCCGCATGAGCTGTCCGGCGGCCAGCAGCAACGTGTCGCCCTGGCCCGGGCGCTGGCGCCCGAGCCGCAACTGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1237790‑1237638‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgctgGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAGGCAATGTTCTGCGCCACGGTCAGGTGCGGGAACAGTGCG > NC_002947/1237695‑1237842 AAACACCCACGCCAGGCGGCCGTCATCGAAGAGATGCTGGAGCTGGTCAAACTCGGCGGGCTGGGCGGGCGTTACCCGCATGAGCTGTCCGGCGGCCAGCAGCAACGTGTCGCCCTGGCCCGGGCGCTGGCGCCCGAGCCGCAACTGCTG > 2:382418/1‑150AAACACCCACGCCAGGCGGCCGTCATCGAAGAGATGCTGGAGCTGGTCAAACTCGGCGGGCTGGGCGGGCGTTACCCGCATGAGCTGTCCGGCGGCCAGCAGCAACGTGTCGCCCTGGCCCGGGCGCTGGCGCCCGAGCCGCAACTGCTG > 1:478632/1‑150 AACACCCACGCCAGGCGGCCGTCATCGAAGAGATGCTGGAGCTGGTCAAACTCGGCGGGCTGGGCGGGCGTTACCCGCATGAGCTGTCCGGCGGCCAGCAGCAACGTGTCGCCCTGGCCCGGGCGCTGGCGCCCGAGCCGCAACTGCTGC > 1:11731/1‑150 CACCCACGCCAGGCGGCCGTCATCGAAGAGATGCTGGAGCTGGTCAAACTCGGCGGGCTGGGCGGGCGTTACCCGCATGAGCTGTCCGGCGGCCAGCAGCAACGTGTCGCCCTGGCCCGGGCGCTGGCGCCCGAGCCGCAACTGCTGCTG < 1:1541316/150‑1 GCCAGCAGCAACGTGTCGCCCTGGCCCGGGCGCTGGCGCCCGAGCCGCAACTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGG > 1:168627/1‑149 GCCAGCAGCAACGTGTCGCCCTGGCCCGGGCGCTGGCGCCCGAGCCGCAACTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGG < 2:168627/149‑1 CAGCAGCAACGTGTCGCCCTGGCCCGGGCGCTGGCGCCCGAGCCGCAACTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCA < 1:2144456/92‑1 CAGCAGCAACGTGTCGCCCTGGCCCGGGCGCTGGCGCCCGAGCCGCAACTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCA > 2:2144456/1‑92 GCTGCTGGCGGCCGGAGAGCTTATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGAGCAGCTCCAGCATCTCTTCGAGGACGGCCGCCTGGCGTTGGTGTTTGGCGATACCAAAGGCAATGTTCTGCGCCACGGTCAGGTGCGGGAACA < 2:782115/150‑1 GCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTC > 2:1082285/1‑76 GCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTC < 1:1082285/76‑1 TGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGTGATACCAAAGGCAATGTTCTGCGCCACGGTCAGGTGCGGGAACAGT < 1:1430108/150‑1 TGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAGGCAATGTTCTGCGCCACGGTCAGGTGCTGGAACAGT < 2:101580/150‑1 TGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGA > 1:259850/1‑106 TGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGA < 2:259850/106‑1 CTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAGGCAATGTTCTGCGCCACGGTCAGGTGCGGGAACAGTGC < 1:1535509/150‑1 CTGGCCGACGGACAGCTCGTGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAGGCAATGTTCTGCGCCACGGTCAGGTGCGGGAACAGTGC < 2:989244/150‑1 TGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAGGCAATGTTCTGCGCCACGGTCAGGTGCGGGAACAGTGCG < 1:256186/150‑1 TGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAGGCAATGTTCTGCGCCACGGTCAGGTGCGGGAACAGTGCG > 2:1506707/1‑150 AAACACCCACGCCAGGCGGCCGTCATCGAAGAGATGCTGGAGCTGGTCAAACTCGGCGGGCTGGGCGGGCGTTACCCGCATGAGCTGTCCGGCGGCCAGCAGCAACGTGTCGCCCTGGCCCGGGCGCTGGCGCCCGAGCCGCAACTGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1237790‑1237638‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgctgGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAGGCAATGTTCTGCGCCACGGTCAGGTGCGGGAACAGTGCG > NC_002947/1237695‑1237842 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |