| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5100019 | 54 (0.610) | 6 (0.090) | 6/196 | NT | 12.4% | intergenic (+57/+96) | PP_4488/phhR | hypothetical protein/sigma‑54 dependent transcriptional regulator |
| ? | NC_002947 | = 5100051 | 42 (0.600) | intergenic (+89/+64) | PP_4488/phhR | hypothetical protein/sigma‑54 dependent transcriptional regulator | |||||
Only 100 of 147 total aligned reads displayed.
TGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCG > NC_002947/5099874‑5100167 | gCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAAt < 1:1900955/150‑1 (MQ=255) gCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAAt > 1:82819/1‑150 (MQ=255) ccGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCCAGCGCTACACAAGGCCGCTCCCACAGATAATGCGCT‑c > 2:572267/1‑150 (MQ=255) gCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCGGCTCCCACAGATAGTGCGCT‑CAg > 1:2321036/1‑150 (MQ=255) tGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCa > 1:977278/1‑150 (MQ=255) aCCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGgtaatacgctgtgctctg > 2:695424‑M1/1‑132 (MQ=255) aCGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGcac > 2:1448257/1‑150 (MQ=255) gggggACTCCCAGGGCCAGAAGCACATTCTCGAAGACCGCGTGATGGGGAACAGCTGCTCCACCGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGcaca < 2:2080235/147‑1 (MQ=255) tCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTAtt > 1:405736/1‑150 (MQ=255) ccAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTAc > 1:143055/1‑150 (MQ=255) ccAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTAc > 1:998481/1‑150 (MQ=255) cacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTAc > 2:1777346‑M1/94‑150 (MQ=255) ggCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGgtaatacgctgtgctctggctgagcgcattctaaaa < 1:695424‑M1/150‑37 (MQ=255) gCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGATGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctctg > 1:2406320‑M2/1‑145 (MQ=255) ccAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGTGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgtgg > 1:36897‑M2/1‑144 (MQ=255) gaagaaCATTCTCGAATACCGCGAGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGAGGCCCTGCGGGCCCCTATCGCGAAACAAGGCCGCTCCCACCGAAAAAGCGCA‑CAAACCGAGCACAGCGTATTCCctgtgggag < 2:1697952‑M2/150‑10 (MQ=255) aaGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgtgggagc > 2:1185908‑M2/1‑140 (MQ=255) aGCACATTCTCGAATACCGCGTGCTGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgtgggagcg > 2:998481‑M2/1‑139 (MQ=255) aGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgtgggagcg > 2:1905528‑M2/1‑139 (MQ=255) gCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgtgggagcgg < 2:1084342‑M2/150‑13 (MQ=255) aagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCtt > 2:2085362‑M1/78‑150 (MQ=255) tcGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGa > 1:79615/1‑99 (MQ=255) tcGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGa < 2:79615/99‑1 (MQ=255) cGAATACCGCGTGATGGGGAACGGCTGCTCCCACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGGTAATACGCT‑GTGCTCTGGCTGAGCGCATTATctgtgggagcggccttgtgtc > 1:517755‑M2/1‑129 (MQ=255) gAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCTACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgtgggagcggccttgtgtcg > 2:82819‑M2/1‑128 (MQ=255) cgcgTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgtgggagcg > 1:2051654‑M2/1‑122 (MQ=255) cgcgTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAg < 2:977278/150‑1 (MQ=255) gcgTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAgg > 2:568097/1‑150 (MQ=255) gggAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGcgtt < 2:1463285/150‑4 (MQ=255) aaCGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgt < 1:534255‑M2/114‑5 (MQ=255) aaCGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgt > 2:534255‑M2/1‑110 (MQ=255) aaCGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCa < 1:1992131/150‑1 (MQ=255) tcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTAc < 1:202202‑M1/57‑1 (MQ=255) tcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTAc > 2:202202‑M1/51‑107 (MQ=255) tgctCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCa > 1:744075/1‑150 (MQ=255) gctCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAg < 2:405736/150‑1 (MQ=255) tCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGgtaatacgctgtgctctggctgagcgcattatctgtg > 1:1453467‑M1/1‑69 (MQ=255) tCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTAc > 2:372274/1‑101 (MQ=255) ccAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgtgggagcggccttgt < 2:2218192‑M2/118‑19 (MQ=255) ccAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgtgggagcggccttgt > 1:2218192‑M2/1‑100 (MQ=255) cAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAATCCCAGGTTc > 2:1404180/1‑150 (MQ=255) cAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAAAAAACTCCCACAGATCA‑CCGTTGCTTCTATGTCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTc > 1:1497784/1‑150 (MQ=255) aaCGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCt > 1:556064/1‑150 (MQ=255) aaCGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCATATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAATGCAAAGCAGTCGCAGGTTCt > 2:1044212/1‑150 (MQ=255) cGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCATATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCCAGGGTAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCttt < 1:1044212/150‑1 (MQ=255) gCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGATGCTAAAGGACTGCAACGCAGTCCCAGGTTCTTTGa < 1:572267/150‑1 (MQ=255) cTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGAc < 1:568097/150‑1 (MQ=255) cTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGAc < 2:827692/150‑1 (MQ=255) tGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGAcc > 1:1086851/1‑150 (MQ=255) cTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgtgg > 2:2202707‑M2/1‑86 (MQ=255) cTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgtgg < 1:2202707‑M2/92‑7 (MQ=255) ttGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGgtaatacgctgtgctctggctgagcgcattatctgt < 2:99937‑M1/89‑37 (MQ=255) aaTCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATc > 2:1293869/1‑150 (MQ=255) ggggCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCt < 2:2348476/128‑1 (MQ=255) ggggCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCt > 1:2348476/1‑128 (MQ=255) ggggCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCC‑CAGCCCGAGCACAGCGAATTAGCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCACGGTCTTTGACCAACAACTAATccgccg > 1:1926002/1‑150 (MQ=38) ggCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGAc > 1:30385/1‑131 (MQ=255) ggCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGAc < 2:30385/131‑1 (MQ=255) ccTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAc < 2:2140205/102‑1 (MQ=255) ccTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAc > 1:2140205/1‑102 (MQ=255) ccTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTg < 2:1497784/150‑1 (MQ=255) cTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGt < 2:1274255/150‑1 (MQ=255) ctccTATCGCGACACAAGGTCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGa < 2:899607/148‑1 (MQ=255) tATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCttt < 2:329792/113‑1 (MQ=255) TCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACcaacaa > 1:1477910‑M1/1‑120 (MQ=255) GCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATccc < 1:466727‑M1/150‑1 (MQ=255) gACACAAGGCCGCTCCCACAGataatgcgctcagccagagcacagcgtattacctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgtgggagcagccgttccccatcacgcggtattcg > 1:517755‑M1/1‑21 (MQ=255) acaAGGCCGCTCCCACAGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttgg > 1:2218192‑M1/1‑18 (MQ=255) ACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAAc < 1:2367240‑M1/150‑1 (MQ=255) aaGGCCGCTCCCACAGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaa > 2:2181427‑M1/1‑16 (MQ=255) aaGGCCGCTCCCACAGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaa < 1:2181427‑M1/101‑86 (MQ=255) AAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACtt < 2:554803‑M1/150‑1 (MQ=255) gaCGCTCCGACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgtt < 1:477439‑M1/148‑1 (MQ=255) GCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCttt > 1:1041182‑M1/1‑99 (MQ=255) GCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCttt < 2:1041182‑M1/99‑1 (MQ=255) GCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgtt > 2:655611‑M1/1‑150 (MQ=255) ccGCTCCCACAGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttggagcagccgttccccatcacgcggtattcgagaatgtgc < 2:1084342‑M1/150‑139 (MQ=255) cGCTCCCACAGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttggagcagccgttccccatcacgcggtattcgagaatgtgct > 2:1905528‑M1/1‑11 (MQ=255) cGCTCCCACAGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttggagcagccgttccccatcacgcg < 2:2051654‑M1/133‑123 (MQ=255) cGCTCCCACAGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttggagcagccgttccccatcacgcg > 1:2051654‑M1/1‑11 (MQ=255) gCTCCCACAGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttggagcagccgttccccatcacgcggtattcgagaatgtgctt > 2:1185908‑M1/1‑10 (MQ=255) GCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGc < 2:923069‑M1/150‑1 (MQ=255) GCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGc < 1:135815‑M1/150‑1 (MQ=255) cTCCCACAGggaatacgctgtgctcggtttgtgcgctttttcggtgggagcggccttgtttcgcgataggggcccgcagggcctccgattccaaggtatcagccgttggagcagccgttccccatctcgcggtattcgagaatgttcttc < 2:1697952‑M1/150‑142 (MQ=255) tCCCACAGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgataggggcgccaacagcccccgattccaaggtatcaaacgtaggagcacccgttccccatcacgcggcattcgagactgtgctttt > 1:2339979‑M1/1‑8 (MQ=255) cccACAGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttggagcagccgttccccatcacgcggtattcgagaatgtgcttctg > 2:909561‑M1/1‑7 (MQ=255) ccACAGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttggagcagccgttccc < 1:887538‑M1/119‑114 (MQ=255) ccACAGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttggagcagccgttccc > 2:887538‑M1/1‑6 (MQ=255) ccACAGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaag < 1:2202707‑M1/92‑87 (MQ=255) ccACAGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaag > 2:2202707‑M1/1‑6 (MQ=255) ccACAGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcacgataggggcccgcagggcccccgattccaaggtatcagccgttggagcagccgttccccatcacgcggtattcgagaatgtgcttctgg > 1:36897‑M1/1‑6 (MQ=255) CCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTAt < 1:170066‑M1/35‑1 (MQ=255) cacaGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttgga < 2:1453467‑M2/106‑70 (MQ=255) cacaGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttgga > 1:1453467‑M2/1‑37 (MQ=255) acaGgtaatacgctgtgctctggctgagcgcattatctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttggagcagccgtt > 2:534255‑M1/1‑4 (MQ=255) acaGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaa > 1:99937‑M2/1‑36 (MQ=255) ACAGATAATGCGCT‑CAGCCAGAGCACAGCGTCTTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGt < 1:804139‑M1/150‑1 (MQ=255) ACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGc < 1:1089522‑M1/121‑1 (MQ=255) ACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGc < 1:1051626‑M1/121‑1 (MQ=255) AGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCg < 2:1490567‑M1/150‑1 (MQ=255) | TGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCT‑CAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCG > NC_002947/5099874‑5100167 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |