New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1797361 =	86 (0.970)	5 (0.060)	5/236	NT	5.7%	coding (20/777 nt)	lpxA	acyl‑[acyl‑carrier‑protein]‑‑UDP‑N‑ acetylglucosamine O‑acyltransferase
	?	NC_002947	1797413 =	82 (0.970)					coding (72/777 nt)	lpxA	acyl‑[acyl‑carrier‑protein]‑‑UDP‑N‑ acetylglucosamine O‑acyltransferase

CGGTTGTGCTTGCCGATGCGGGTCGGGCCTTTGAGCACAACATGCGGGCCGATAACGGTGCCCTCCCCGATTTCTACATCAGGGCCAACGATCGACCAAGGGCCGACCTCGACGCCGTCGGCCAGCTTGGCCGACGGATCGATAATGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1797511‑1797361 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCAGTTTTCCTCGATCGGTGAAGACACCCCGGACCTTAAGT  >  NC_002947/1797413‑1797558                                                                                                                                                                                                                                                                                                           CGGTTGTGCTTGCCGATGCGGGTCGGGCCTTTGAGCACAACATGCGGGCCGATAACGGTGCCCTCCCCGATTTCTACATCAGGGCCAACGATCGACCAAGGGCCGACCTCGACGCCGTCGGCCAGCTTGGCCGACGGATCGATAATGGCC                                                                                                                                                     <  2:2168923/150‑1                             CTTTGAGCACAACATGCGGGCCGATAACGGTGCCCTCCCCGATTTCTACATCAGGGCCAACGATCGACCAAGGGCCGACCTCGACGCCGTCGGCCAGCTTGGCCGACGGATCGATAATGGC                                                                                                                                                      >  1:584809/1‑121                             CTTTGAGCACAACATGCGGGCCGATAACGGTGCCCTCCCCGATTTCTACATCAGGGCCAACGATCGACCAAGGGCCGACCTCGACGCCGTCGGCCAGCTTGGCCGACGGATCGATAATGGC                                                                                                                                                      <  2:584809/121‑1                                                                TCCCCGATTTCTACATCAGGGCCAACGATCGACCAAGGGCCGACCTCGACGCCGTCGGCCAGCTTGGCCGACGGATCGATAATGGCCC                                                                                                                                                    <  2:1032590/88‑1                                                                TCCCCGATTTCTACATCAGGGCCAACGATCGACCAAGGGCCGACCTCGACGCCGTCGGCCAGCTTGGCCGACGGATCGATAATGGCCC                                                                                                                                                    >  1:1032590/1‑88                                                                                              GACCAAGGGCCGACCTCGACGCCGTCGGCCAGCTTGGCCGACGGATCGATAATGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGG                                                                                                              <  2:589048/96‑1                                                                                              GACCAAGGGCCGACCTCGACGCCGTCGGCCAGCTTGGCCGACGGATCGATAATGGACCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGG                                                                                                              >  1:589048/1‑96                                                                                                CCAAGGGCCGACCTCGACGCCGCCGGCCAGCTTGGCCGACGGATCGATAATGGCCCTTCGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCACAGGCCCGACCCGCATCGGCACGCcc                                                      >  2:662435/1‑148                                                                                                 CAAGGGCCGACCTCGACGCCGTCGGCCAGCTTGGCCGACGGATCGATAATGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGG                                                                                                             >  1:212037/1‑94                                                                                                 CAAGGGCCGACCTCGACGCCGTCGGCCAGCTTGGCCGACGGATCGATAATGGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGG                                                                                                             <  2:212037/94‑1                                                                                                  AAGGGCCGACCTCGACGCCGTCGGCCAGCTTGGCCGACGGATCGATAATG                                                                                                                                                        >  1:180727/1‑50                                                                                                  AAGGGCCGACCTCGACGCCGTCGGCCAGCTTGGCCGACGGATCGATAATG                                                                                                                                                        <  2:180727/50‑1                                                                                                                                                   GGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCAGTTTTCCTCGATCGGTGAAGACACCCCGGACCTTAAG   <  1:390580/150‑1                                                                                                                                                   GGCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCAGTTTTCCTCGATCGGTGAAGACACCCCGGACCTTAAG   <  2:511369/150‑1                                                                                                                                                    GCCCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCAGTTTTCCTCGATCGGTGAAGACACCCCGGACCTTAAGT  >  2:1102531/1‑150                                                                                                                                                      CCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCAGTTTTCC                                 <  2:110006/117‑1                                                                                                                                                      CCTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCAGTTTTCC                                 >  1:110006/1‑117                                                                                                                                                                                                                                                                                                           CGGTTGTGCTTGCCGATGCGGGTCGGGCCTTTGAGCACAACATGCGGGCCGATAACGGTGCCCTCCCCGATTTCTACATCAGGGCCAACGATCGACCAAGGGCCGACCTCGACGCCGTCGGCCAGCTTGGCCGACGGATCGATAATGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1797511‑1797361 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccTTGGTCGATCGTTGGCCCTGATGTAGAAATCGGGGAGGGCACCGTTATCGGCCCGCATGTTGTGCTCAAAGGCCCGACCCGCATCGGCAAGCACAACCGTATCTTTCAGTTTTCCTCGATCGGTGAAGACACCCCGGACCTTAAGT  >  NC_002947/1797413‑1797558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.