New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3886959	59 (0.670)	13 (0.150)	11/246	NT	16.7%	coding (942/2118 nt)	PP_3430	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	3963919 =	71 (0.800)					coding (129/933 nt)	PP_3493	LysR family transcriptional regulator

CGCTGCAGCAGTTCGAGGCTGCCGCCGATACCGGACAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATC  >  NC_002947/3886813‑3887107                                                                                                                                                    |                                                                                                                                                     cgcTGCAGCAGTTCGAGGCTGCCGCCGATACCGGACAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCg                                                                                                                                                   <  2:482347/150‑1 (MQ=255)  gcTGCAGCAGTTCGAGGCTGCCGCCGATACCGGACAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCgg                                                                                                                                                  <  1:1594345/150‑1 (MQ=255)  gcTGCAGCAGTTCGAGGCTGCCGCCGATACCGAACAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTctgg                                                                                                                                                  <  1:913057‑M1/150‑5 (MQ=255)    tGCAGCAGTTCGAGGCTGCCGCCGATACCGGACAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTg                                                                                                                                                <  1:981537/150‑1 (MQ=255)       agcagTTCGAGGCTGCCGCCGATACCGGACAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATg                                                                                                                                             >  1:108523/1‑150 (MQ=255)           gTTCGAGGCTGCCGCCGATACCGGACAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGAt                                                                                                                                              >  1:813464/1‑145 (MQ=255)           gTTCGAGGCTGCCGCCGATACCGGACAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGAt                                                                                                                                              <  2:813464/145‑1 (MQ=255)             tCGAGGCTGCCGCCGATACCGGACAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCgg                                                                                                                                       >  2:2215995/1‑150 (MQ=255)              cGAGGCTGCCGCCGATACCGGACAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCCGCCCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGc                                                                                                                                      <  1:1158068/150‑1 (MQ=255)                      ccgccgATACCGGACAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTGGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTctggttctccagctcggcgacgat                                                                                                                              >  1:762722‑M1/1‑126 (MQ=255)                          cgATACCGGACAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTctggttctccagctcggcgacgatgcgc                                                                                                                          <  2:762722‑M1/150‑29 (MQ=255)                           gATACCGGACAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCag                                                                                                                         <  2:108523/150‑1 (MQ=255)                           gATACCGGACAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCag                                                                                                                         >  2:2090274/1‑150 (MQ=255)                                   aCAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGc                                                                                                                 <  2:1378521/150‑1 (MQ=255)                                    cAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGcc                                                                                                                <  1:745518/150‑1 (MQ=255)                                        aaGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTctggttctccagctcggcgacgatgcgcgaaacctgcgctgc                                                                                                            >  1:2353976‑M1/1‑108 (MQ=255)                                              ttcatttcatGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCACCCGTCGTCAGGAGGCTGCCGTCAAACCTc                                                                                                      <  1:2248112/150‑1 (MQ=255)                                              ttcatttcatGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTc                                                                                                      >  1:1060754/1‑150 (MQ=255)                                              ttcatttcatGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTc                                                                                                      <  2:1581438/150‑1 (MQ=255)                                               tcatttcatGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCTCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCg                                                                                                     <  1:2251711/150‑1 (MQ=255)                                               tcatttcatGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCg                                                                                                     >  1:925292/1‑150 (MQ=255)                                                 atttcatGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCagga                                                                                                                       <  1:408362/130‑1 (MQ=255)                                                 atttcatGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCagga                                                                                                                       >  2:408362/1‑130 (MQ=255)                                                      atGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCaaa                                                                                                          >  2:652248/1‑138 (MQ=255)                                                      atGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCaaa                                                                                                          <  1:652248/138‑1 (MQ=255)                                                      atGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCa                                                                                              >  1:2122785/1‑150 (MQ=255)                                                            cATGCCGCCCGCCAACTGGCCCACCACCTAAATACACTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGaaa                                                                                        >  1:2268090/1‑150 (MQ=255)                                                             aTGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAAc                                                                                       <  2:1746784/150‑1 (MQ=255)                                                                ccgcccgcCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTctggttctccagctcggcgacgatgcgcgaaacctgcgctgcagaaatatccagagcattggcagc                                                                                    <  2:1089392‑M1/150‑67 (MQ=255)                                                                 cgcccgccAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTCCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGt                                                                                   <  1:429854/150‑1 (MQ=255)                                                                  gcccgccAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGCCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTg                                                                                  <  1:1998809/150‑1 (MQ=255)                                                                    ccgccAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGt                                                                                >  1:746596/1‑150 (MQ=255)                                                                           cTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAAc                                                                                                         >  1:497660/1‑118 (MQ=255)                                                                           cTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAAc                                                                                                         <  2:497660/118‑1 (MQ=255)                                                                                ccaccaCCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTctggttctccagctcggcgacgatgcgcgaaacctgcgctgcagaaatatccagagcattggcagctgcagcgaagctgcca                                                                    <  2:1423020‑M1/150‑83 (MQ=255)                                                                                ccaccaCCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTctggttctccagctcggcgacgatgcgcgaaacctgcgctgca                                                                                                           >  2:1079045‑M1/1‑68 (MQ=255)                                                                                ccaccaCCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTctggttctccagctcggcgacgatgcgcgaaacctgcgctgca                                                                                                           <  1:1079045‑M1/111‑44 (MQ=255)                                                                                ccaccaCCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGt                                                                                                                                            <  2:578308/78‑1 (MQ=255)                                                                                ccaccaCCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGt                                                                                                                                            >  1:578308/1‑78 (MQ=255)                                                                                ccaccaCCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATcgc                                                                    >  1:256531/1‑150 (MQ=255)                                                                                ccaccaCCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGACTGCAGACCAGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATcgc                                                                    >  2:195731/1‑150 (MQ=255)                                                                                ccaccaCCTCCATACGCGCACTGTTGTGCATCAGCGCCTCCGCCTGACTGGCAGCACTC‑CCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTCGTGACCATcgc                                                                    >  2:84377/1‑150 (MQ=255)                                                                                 caccacCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATcgcg                                                                   <  1:2378037/150‑1 (MQ=255)                                                                                 caccacCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATcgcg                                                                   <  1:2215995/150‑1 (MQ=255)                                                                                 caccacCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCACA‑CTCAACGCTTTCTctgttctgtctgctcgtcgacgatgcgcgaaacctgcgctgcagaaatatccagagcattggcagctgcagcgaagctgccac                                                                   >  1:1499564‑M1/1‑67 (MQ=255)                                                                                     accTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGgtgt                                                               <  2:2122785/150‑1 (MQ=255)                                                                                       cTCCCTACGCTGCCTCTTGTGCATCAGCGCCTCTGCCTGGCGCGCAGC‑CTCTTCACGGGCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCg                                                             >  2:1001116/1‑150 (MQ=255)                                                                                       cTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTc                                                                                                      <  2:1447679/109‑1 (MQ=255)                                                                                       cTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTc                                                                                                      >  1:1447679/1‑109 (MQ=255)                                                                                       cTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCg                                                             <  2:925292/150‑1 (MQ=255)                                                                                         ccATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCa                                                                                     >  1:1500202/1‑124 (MQ=255)                                                                                         ccATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCa                                                                                     <  2:1500202/124‑1 (MQ=255)                                                                                           aTACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGcc                                                                                                                                     <  1:445548/74‑1 (MQ=255)                                                                                           aTACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGcc                                                                                                                                     >  2:445548/1‑74 (MQ=255)                                                                                           aTACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAgg                                                         >  2:589164/1‑150 (MQ=255)                                                                                           aTACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAgg                                                         >  2:1050001/1‑150 (MQ=255)                                                                                            tACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGc                                                        >  1:336303/1‑150 (MQ=255)                                                                                               gCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTctggttctccagctcggcgacgatgcgcgaaacctgcgctgcagaaatatccagagcattggcagctgcagcgaagctgccacattccaccacccgg                                                     >  2:1618575‑M1/1‑53 (MQ=255)                                                                                                cTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTctggttctccagctcggcgacgatgcgcgaaacctgcgctgcagaaatatccagagcattggcagctgcagcgaagctgccacattccaccacccggg                                                    >  2:1318788‑M1/1‑52 (MQ=255)                                                                                                         gtgCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTctggttctccagctcggcgacgatgcgcgaaacctgcgctgcagaaatatccagagcattggcagctgcagcgaagctgccacattccaccacccgggtgaaggtac                                           <  2:1499564‑M1/150‑108 (MQ=255)                                                                                                         gtgCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTctggttctccagctcggcgacgatgcgcgaaacctgcgctgcagaaatatccagagcattggcagctgcagcgaagctgccacattccaccacccgggtgaaggtac                                           <  2:1951867‑M1/150‑108 (MQ=255)                                                                                                              tCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTGCAGCTGATcag                                      >  1:721410/1‑148 (MQ=255)                                                                                                              tCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCCGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCcg                                      >  1:2107301/1‑150 (MQ=255)                                                                                                               cAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCcgc                                     <  2:336303/150‑1 (MQ=255)                                                                                                                 gcgcCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCTGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGt                                   <  2:1905481/150‑1 (MQ=255)                                                                                                                    ccTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTctggttctccagctcggcgacgatgcgcgaaacctgcgctgcagaaatatccagagcattcgcagctgcagcgaaaccgcgacattccaccccccggttgaagggacgcatggcatgt                                <  2:2353976‑M1/150‑119 (MQ=255)                                                                                                                    ccTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGc                                <  2:740469/150‑1 (MQ=255)                                                                                                                         gCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCAt                           <  2:1060754/150‑1 (MQ=255)                                                                                                                                     gC‑CTCTTCACGATCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCg               <  2:2181269/150‑1 (MQ=255)                                                                                                                                         tctTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGac            >  2:1236025/1‑150 (MQ=255)                                                                                                                                           ttCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGa                                                     <  2:1308607/107‑1 (MQ=255)                                                                                                                                           ttCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGa                                                     >  1:1308607/1‑107 (MQ=255)                                                                                                                                           ttCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGAtc                                                   >  1:989698/1‑109 (MQ=255)                                                                                                                                           ttCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGAtc                                                   <  2:989698/109‑1 (MQ=255)                                                                                                                                           ttCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGacac          >  1:911974/1‑150 (MQ=255)                                                                                                                                                   cTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTAGCGCCCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATc  >  1:636323/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CGCTGCAGCAGTTCGAGGCTGCCGCCGATACCGGACAGCAAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGC‑CTCTTCACGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATC  >  NC_002947/3886813‑3887107

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.