New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	729591 =	95 (1.070)	8 (0.100)	8/226	NT	8.5%	coding (118/741 nt)	yfiH	protein YfiH
	?	NC_002947	729633 =	86 (1.060)					coding (160/741 nt)	yfiH	protein YfiH

CAGCTGGCATCGGCCTCGGCCACCACGGTCGGGTCGGCATCCGCCACCACCCGCCCATGCACCTGCTTGAGCCAGGCCGGTTGGATGGTGAACTGTTCGCTCAGGCGGCGGCGGTTCTCGGCGACCGCGGCAGGGTCATCCCCAACATGGTCGCCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/729748‑729591 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgccgagAACCGCCGCCGCCTGAGCGAACAGTTCACCATCCAACCGGCCTGGCTCAAGCAGGTGCATGGGCGGGTGGTGGCGGATGCCGACCCGACCGTGGTGGCCGAGGCCGATGCCAGCTGGACCCGCCAGCCTGGCATTGCCTGCACCGTGAT  >  NC_002947/729633‑729781                                                                                                                                                                                                                                                                                                                     CAGCTGGCATCGGCCTCGGCCACCACGGTCGGGTCGGCATCCGCCACCACCCGCCCATGCACCTGCTTGAGCCAGGCCGGTTGGATGGTGAACTGTTCGCTCAGGCGGCGGCGGTTCTCGGCGACCGCGGCAGGGTCATCCCCAACATGG                                                                                                                                                               <  2:2377668/150‑1        CATCGGCCTCGGCCACCACGGTCGGGTCGGCATCCGCCACCACCCGCCCATGCACCTGCTTGAGCCAGGCCGGTTGGATGGTGAACTGTTCGCTCAGGCGGCGGCGGTTCTCGGCGACCGCGGCAGGGTCATCCCCAACATGGTCGCCGA                                                                                                                                                        >  2:287729/1‑150                                                              CCTGCTTGAGCCAGGCCGGTTGGATGGTGAACTGTTCGCTCAGGCGGCGGCGGTTCTCGGCGACCGCGGCAGGGTCATCCCCAACATG                                                                                                                                                                <  1:1667929/88‑1                                                              CCTGCTTGAGCCAGGCCGGTTGGATGGTGAACTGTTCGCTCAGGCGGCGGCGGTTCTCGGCGACCGCGGCAGGGTCATCCCCAACATG                                                                                                                                                                >  2:1667929/1‑88                                                                                                   GCTCAGACGGCGGCGGTTCTCGGCGACCGCGGCAGGGTCATCCCCAACATGGTCGCCGAGAACCGCCGACGCCTGAGCGAACAGTTCACCATCCAACCGGCCTGGCTCAAGCAGGTGCATGGGCGGGTGGTGGCGGATGCCGACCCGACC                                                             >  2:1677657/1‑150                                                                                                                   TTCTCGGCGACCGCGGCAGGGTCATCCCCAACATGGTCGCCGAGAACCGCCGCCGCCTGAGCGAACAGTTCACCATCCAACCGGCCTGGCTCAAGCAGGTGCATGGGCGGGTGGTGGCGGATGCCGACCCGACCGTGGTGGCCGAGGCCG                                             >  1:1781342/1‑150                                                                                                                     CTCGGCGACCGCGGCAGGGTCATCCCCAACATGGTCGCCGAGAACCGCCGCCGCCTGAGCGAACAGTTCACCATCCAACCGGCCTGGCTCAAGCAGGTGCATGGGCGGGTGGTGGC                                                                             <  1:736941/116‑1                                                                                                                     CTCGGCGACCGCGGCAGGGTCATCCCCAACATGGTCGCCGAGAACCGCCGCCGCCTGAGCGAACAGTTCACCATCCAACCGGCCTGGCTCAAGCAGGTGCATGGGCGGGTGGTGGC                                                                             >  2:736941/1‑116                                                                                                                        GGCGACCGCGGCAGGGTCATCCCCAACATGGTCGCCGAGAACCGCCGCCGCCTGAGCGAACAGTTCACCATCCAACCGGCCTGGCTCAAGCAGGTGCATGGGCGGGTGGTGGCGGATGCCGAC                                                                   <  1:1782867/123‑1                                                                                                                        GGCGACCGCGGCAGGGTCATCCCCAACATGGTCGCCGAGAACCGCCGCCGCCTGAGCGAACAGTTCACCATCCAACCGGCCTGGCTCAAGCAGGTGCATGGGCGGGTGGTGGCGGATGCCGAC                                                                   >  2:1782867/1‑123                                                                                                                         GCGACCGCGGCAGGGTCATCCCCAACATGGTCGCCGAGAACCGCCGCCGCCTGAGCGAACAGTTCACCATCCAACCG                                                                                                                >  1:939393/1‑77                                                                                                                         GCGACCGCGGCAGGGTCATCCCCAACATGGTCGCCGAGAACCGCCGCCGCCTGAGCGAACAGTTCACCATCCAACCG                                                                                                                <  2:939393/77‑1                                                                                                                                                     GGTCGCCGAGAACCGCCGCCGCCTGAGCGAACAGTTCACCATCCAACCGGCCTGGCTCAAGCAGGTGCATGGGCGGGTGGTGGCGGATGCCGACCCGACCGTGGTGGCCGAGGCCGATGCCAGCTGGACCCGCCAGCCTGGCATTGCCTG           <  2:2305718/150‑1                                                                                                                                                           CGAGAACCGCCGCCGCCTGAGCGAACAGTTCACCATCCAACCGGCCTGGCTCAAGCAGGTGCATGGGCGGGTGGTGGCGGATGCCGACCCGACCGTGGTGGCCGAGGCCGATGCCAGCTGGACCCGCCAGCCTGGCATTGCCTGCACCGT     >  1:97052/1‑150                                                                                                                                                           CGAGAACCGCCGCCGCCTGAGCGAACAGTTCACCATCCAACCGGCCTGGCTCAAGCAGGTGCATGGGCGGGTGGTGGCGGATGCCGACCCGACCGTGGTGGCCGAGGCCGATGCCAGCTGGACCCGCCAGCCTGGCATTGCCTGCACCGT     >  2:1003389/1‑150                                                                                                                                                           CGAGAACCGCCGCCGCCTGAGCGAACAGTTCACCATCCAACAGGCCTGGCTCAAGCAGGTGCATGGGCGGGTGGTGGCGGATGCCGACCCGACCGTGGTGGCCGAGGCCGATGCCAGCTGGACCCGCCAGCCTGGCATTGCCTGCACCGT     >  1:1759683/1‑150                                                                                                                                                              GAACCGCCGCCGCCTGAGCGAACAGTTCACCATCCAACCGGCCTGGCTCAAGCAGGTGCATGGGCGGGTGGTGGCGGATGCCGACCCGACCGTGGTGGCCGAGGCCGATGCCAGCTGGACCCGCCAGCCTGGCATTGCCTGCACCGTGAT  <  2:1460011/150‑1                                                                                                                                                                                                                                                                                                                     CAGCTGGCATCGGCCTCGGCCACCACGGTCGGGTCGGCATCCGCCACCACCCGCCCATGCACCTGCTTGAGCCAGGCCGGTTGGATGGTGAACTGTTCGCTCAGGCGGCGGCGGTTCTCGGCGACCGCGGCAGGGTCATCCCCAACATGGTCGCCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/729748‑729591 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgccgagAACCGCCGCCGCCTGAGCGAACAGTTCACCATCCAACCGGCCTGGCTCAAGCAGGTGCATGGGCGGGTGGTGGCGGATGCCGACCCGACCGTGGTGGCCGAGGCCGATGCCAGCTGGACCCGCCAGCCTGGCATTGCCTGCACCGTGAT  >  NC_002947/729633‑729781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.