New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 618970 =100 (1.130)6 (0.070) 6/234 NT 5.9% coding (1031/1329 nt) pfeS‑I histidine kinase
?NC_002947 619007 = 98 (1.160)coding (994/1329 nt) pfeS‑I histidine kinase

Only 100 of 126 total aligned reads displayed.

CTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTCGAGGG  >  NC_002947/618860‑619156
                                                                                                                                                   |                                                                                                                                                     
cTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGt                                                                                                                                                     >  2:445181/1‑150 (MQ=255)
            ggCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTg                                                                                                                                         <  2:1137644/150‑1 (MQ=255)
             gcgcAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGa                                                                                                                                        >  2:637915/1‑150 (MQ=255)
               gcAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGc                                                                                                                                      <  1:1989371/150‑1 (MQ=255)
                cAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCa                                                                                                                                     <  1:1293559/150‑1 (MQ=255)
                 aGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTTGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCAc                                                                                                                                    <  2:1370307/150‑1 (MQ=255)
                    tGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGc                                                                                                                                 <  2:2028330/150‑1 (MQ=255)
                     gCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCa                                                                                                                                <  2:1665987/150‑1 (MQ=255)
                           aTGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGgcgcg                                                                                                                          >  2:619498/1‑150 (MQ=255)
                               gcCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACg                                                                                                                      <  2:1258358/150‑1 (MQ=255)
                                 ccTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGt                                                                                                                    <  2:625793/150‑1 (MQ=255)
                                  cTCACGCCAGCCATGAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGCATGGCATTGCGCAACAGGTTTTCCGCGGCGTGGGCCAGGATCTCCAGATGGGACTGCACCAGGCAGTCGGTGCCAAGTGAGAACGGCGGGCTCACCCGGTc                                                                                                                   >  2:111697/1‑150 (MQ=255)
                                   tCACGCCAGCCATCAAGGCTAACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTcc                                                                                                                  >  2:2022161/1‑150 (MQ=255)
                                     aCGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGt                                                                                                                                          <  2:2228069/124‑1 (MQ=255)
                                     aCGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGt                                                                                                                                          >  1:2228069/1‑124 (MQ=255)
                                       gccagccaTCAAGGCTGACGCGGCCTTCGGTCGGCGAGTGGCGAATGGCCTTGGGCCGCAGGATTTTCAGAGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGc                                                                                                              >  2:2392026/1‑150 (MQ=255)
                                         cagccaTCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTCTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCg                                                                                                            <  2:739371/150‑1 (MQ=255)
                                          agccaTCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGc                                                                                                           >  2:418395/1‑150 (MQ=255)
                                            ccaTCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCtt                                                                                                         >  1:2007647/1‑150 (MQ=255)
                                            ccaTCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCtt                                                                                                         <  2:1085376/150‑1 (MQ=255)
                                               tCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCg                                                                                                      >  2:2245834/1‑150 (MQ=255)
                                                 aaGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGaa                                                                                                    >  2:2314584/1‑150 (MQ=255)
                                                   ggCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAAc                                                                                                  >  2:1762414/1‑150 (MQ=255)
                                                    gtctgtttcgaaagcggctgggaccgtgcgcgcctgccgtgctcacttggcaccgactGCCTGGGCCAGGCTGTCCAGATTGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCa                                                                                                                                     >  1:1950582‑M1/59‑114 (MQ=255)
                                                    gtctgtttcgaaagcggctgggaccgtgcgcgcctgccgtgctcacttggcaccgactGCCTGGGCCAGGCTGTCCAGATTGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCa                                                                                                                                     <  2:1950582‑M1/56‑1 (MQ=255)
                                                    gCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACa                                                                                                 <  2:1668805/150‑1 (MQ=255)
                                                      tGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGa                                                                                               <  1:2314584/150‑1 (MQ=255)
                                                      tGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGACAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCt                                                                                                          <  2:861766/139‑1 (MQ=255)
                                                      tGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGACAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCt                                                                                                          >  1:861766/1‑139 (MQ=255)
                                                       gACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGAc                                                                                              <  2:2007647/150‑1 (MQ=255)
                                                       gACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGAc                                                                                              <  2:192194/150‑1 (MQ=255)
                                                        aCCCGGTCGTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGgc                                                                                                                             <  1:738653/118‑1 (MQ=255)
                                                         cccGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGt                                                                                            <  1:1457321/150‑1 (MQ=255)
                                                             gCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTc                                                                                        <  1:2245834/150‑1 (MQ=255)
                                                               cTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGc                                                                                      >  2:1633846/1‑150 (MQ=255)
                                                                    gtcggCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAg                                                                                 <  2:953888/150‑1 (MQ=255)
                                                                       ggCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCt                                                                              >  2:536870/1‑150 (MQ=255)
                                                                       ggCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCt                                                                              >  1:969810/1‑150 (MQ=255)
                                                                           aGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTccc                                                                          <  1:586149/150‑1 (MQ=255)
                                                                              ggCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCcaca                                                                       <  1:1570097/150‑1 (MQ=255)
                                                                                     ggCATGGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAg                                                                <  1:619498/150‑1 (MQ=255)
                                                                                       cATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGa                                                                                                                                        <  1:2358236/76‑1 (MQ=255)
                                                                                       cATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGa                                                                                                                                        >  2:2358236/1‑76 (MQ=255)
                                                                                       cATTGCGCAACAGGGTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCCCCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGcc                                                              >  2:128248/1‑149 (MQ=255)
                                                                                        aTTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTcc                                                                           >  2:639727/1‑136 (MQ=255)
                                                                                           tgctcacttggcaccgactgcctggtgcaggccaatctggacagcctggcccaggcAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGAc                                                                                              >  1:1950582‑M2/57‑114 (MQ=255)
                                                                                           tgctcacttggcaccgactgcctggtgcaggccaatctggacagcctggcccaggcAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGAc                                                                                              <  2:1950582‑M2/58‑1 (MQ=255)
                                                                                               aaCAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATAcc                                                      >  1:50393/1‑150 (MQ=255)
                                                                                               aaCAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATAc                                                       >  1:159411/1‑149 (MQ=255)
                                                                                               aaCAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATAc                                                       <  2:159411/149‑1 (MQ=255)
                                                                                                aCAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCg                                                     >  1:352364/1‑150 (MQ=255)
                                                                                                  aGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGc                                                   <  1:1370570/150‑1 (MQ=255)
                                                                                                   ggTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCt                                                  >  1:1090698/1‑150 (MQ=255)
                                                                                                    gTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTc                                                 <  2:1621109/150‑1 (MQ=255)
                                                                                                    gTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTc                                                 >  1:771783/1‑150 (MQ=255)
                                                                                                     ttttCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGgcgc                                                                                                                           <  1:1424084/75‑1 (MQ=255)
                                                                                                     ttttCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGgcgc                                                                                                                           >  2:1424084/1‑75 (MQ=255)
                                                                                                     ttttCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCg                                                <  1:16078/150‑1 (MQ=255)
                                                                                                         ccAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCa                                            <  1:637915/150‑1 (MQ=255)
                                                                                                          cAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCAc                                           >  1:139625/1‑150 (MQ=255)
                                                                                                           aggaCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCAcc                                          <  2:1676194‑M1/146‑1 (MQ=255)
                                                                                                           aGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCGTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCAcc                                          >  2:932216/1‑150 (MQ=255)
                                                                                                             tgcctggtgcaggcccatctggacagcctggcccaggcAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAg                                        >  2:1223530‑M2/39‑150 (MQ=255)
                                                                                                                CTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGGCCCACCCGCTTTCCAGACACACGACCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCt                                     <  1:549823‑M1/150‑1 (MQ=255)
                                                                                                                 tggtgcaggcccatctggacagcctggcccaggcAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGc                                                   <  2:1692749‑M2/101‑1 (MQ=255)
                                                                                                                 tggtgcaggcccatctggacagcctggcccaggcAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGc                                                   >  1:1692749‑M2/35‑135 (MQ=255)
                                                                                                                 TGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCCACAATACCTGCGCGGTCACCAGGCTg                                    <  2:1159653‑M1/150‑1 (MQ=255)
                                                                                                                 TGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTg                                    <  1:322888‑M1/150‑1 (MQ=255)
                                                                                                                  ggtgcaggcccatctggacagcctggcccaggcAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAggctgg                                   <  1:1223530‑M2/117‑1 (MQ=255)
                                                                                                                      cAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCg                                                                                                      >  1:561115/1‑79 (MQ=255)
                                                                                                                      cAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCg                                                                                                      <  2:561115/79‑1 (MQ=255)
                                                                                                                        ggCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCCGGGCTGtt                             >  2:372691/1‑150 (MQ=255)
                                                                                                                         gCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTc                            >  1:770918/1‑150 (MQ=255)
                                                                                                                         gCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTc                            >  1:1816146/1‑150 (MQ=255)
                                                                                                                         gCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTc                            >  2:792632/1‑150 (MQ=255)
                                                                                                                          cTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCg                           <  2:139625/150‑1 (MQ=255)
                                                                                                                            gTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGgt                         <  2:205917/150‑1 (MQ=255)
                                                                                                                            gTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGgt                         <  1:792632/150‑1 (MQ=255)
                                                                                                                                aGATGGGCCTGCACCAGGGAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGtcc                     <  1:1676194/150‑1 (MQ=255)
                                                                                                                                aGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGtcc                     <  1:1618270/150‑1 (MQ=255)
                                                                                                                                aGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGtcc                     >  1:2139442/1‑150 (MQ=255)
                                                                                                                                 gATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTc                                                                                                       >  2:2153568/1‑67 (MQ=255)
                                                                                                                                 gATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTc                                                                                                       <  1:2153568/67‑1 (MQ=255)
                                                                                                                                 gATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAggctgggct                                <  1:1058348/138‑1 (MQ=255)
                                                                                                                                 gATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAggctgggct                                >  2:1058348/1‑138 (MQ=255)
                                                                                                                                  aTGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGtccat                   >  2:358891/1‑150 (MQ=255)
                                                                                                                                    gggCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGtccatcc                 <  2:770918/150‑1 (MQ=255)
                                                                                                                                      gCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATccag               <  2:322888/150‑1 (MQ=255)
                                                                                                                                      gCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATccag               <  1:445181/150‑1 (MQ=255)
                                                                                                                                       ccTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATccagg              >  1:2121430/1‑150 (MQ=255)
                                                                                                                                        cTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATccaggc             <  2:771783/150‑1 (MQ=255)
                                                                                                                                           cACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATccaggccag          <  2:2333611/150‑1 (MQ=255)
                                                                                                                                              cattcAGTCGGTTCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTc       >  2:1844920‑M2/6‑150 (MQ=255)
                                                                                                                                              caggcAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGCAGCCGCCCGCGGAAAGCACCAATACCGGCTCGAACACCAGGCTCCGCTGTTCGGTGTCCATCCAGGCCAGGTc       >  1:1621980‑M2/6‑150 (MQ=255)
                                                                                                                                               aggcAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCGCCAGGATCGTCTGTTCGGTGTCCATCCAGGCCAGGTCg      >  2:1230290‑M2/5‑150 (MQ=255)
                                                                                                                                                ggcAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTCGa     <  1:2208928‑M2/147‑1 (MQ=255)
                                                                                                                                                ggcAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCAACAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTCGa     >  1:622817‑M2/4‑150 (MQ=255)
                                                                                                                                                  cAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCAcc                                                            >  2:1887159‑M2/2‑93 (MQ=255)
                                                                                                                                                   aGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTCGAggg  >  2:32762/1‑150 (MQ=255)
                                                                                                                                                   aGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTCGAggg  <  1:358891/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGGGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACCAGGCTGGGCTGTTCGGTGTCCATCCAGGCCAGGTCGAGGG  >  NC_002947/618860‑619156

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.