New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 618970 =100 (1.130)6 (0.070) 6/234 NT 5.9% coding (1031/1329 nt) pfeS‑I histidine kinase
?NC_002947 619007 = 98 (1.160)coding (994/1329 nt) pfeS‑I histidine kinase

Only 100 of 118 total aligned reads displayed.

GAAAATGCGCTCAAGGTCGGTATCCGGTACGCCTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACC  >  NC_002947/618822‑619116
                                                                                                                                                    |                                                                                                                                                   
   gacctggcctggatggacaccgaacagcggagcctggtgttcgagccggtattggtgctttccgcgggcggctgcttgtgcgaggacgtctgtttcgaaagcggctgggaccgtgcgcgcctgccgtgctcacttggcaccgactGCCTg                                                                                                                                                 >  1:1621980‑M1/146‑150 (MQ=255)
   gacctggcctggatggacaccgaacagcccagcctggtgaccgagccggtattggtgctttccgtgtgggaagccttgtgcgaggacgtctgtttcgaaagcggctgggaccgtgcgcgcctgccgtgctcacttggaaccgactgaatg                                                                                                                                                 >  2:1844920‑M1/146‑146 (MQ=255)
   aaTGCGCTCAAGGTCGGTATCCGGTACGCCTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTg                                                                                                                                                 <  2:2206133/150‑1 (MQ=255)
     tGCGCTCAAGGTCGGTATCCGGTACGCCTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTg‑gg                                                                                                                                              >  1:625793/1‑150 (MQ=255)
        gcTCAAGGTCGGTATCCGGTACGCCTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCa                                                                                                                                           >  1:444725/1‑150 (MQ=255)
        gcTCAAGGTCGGTATCCGGTACGCCTGGCCCTTGGTCACTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCa                                                                                                                                           >  1:1665987/1‑150 (MQ=255)
         cTCAAGGTCGGTATCCGGTACGCCTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGACTGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAg                                                                                                                                          <  1:1951632/150‑1 (MQ=255)
          tCAAGGTCGGTATCCGGTACGCCTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAgg                                                                                                                                         <  1:2149377/150‑1 (MQ=255)
              ggTCGGTATCCGGTACGCCTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGt                                                                                                                                     >  1:1370307/1‑150 (MQ=255)
                tCGGTATCCGGTACGCCTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTcc                                                                                                                                   <  2:444725/150‑1 (MQ=255)
                  ggTATCCGGTACGCCTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAg                                                                                                                                 <  2:1030256/150‑1 (MQ=255)
                    tATCCGGTACGCCTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGAt                                                                                                                               >  1:953888/1‑150 (MQ=255)
                        cGGTACGCCTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCGTG‑GGGCAAGCTGTTCAGATGGGc                                                                                                                           >  2:20365/1‑150 (MQ=255)
                          gTACGCCTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCt                                                                                                                         <  1:926742/150‑1 (MQ=255)
                               ccagcctggtgaccgagccggtattggtgctttccgtgtgggaagccttgtgcgaggacgtctgtttcgaaagcggctgggaccgtgcgcgcctgccgtgctcacttggcaccgactGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCAcc                                                                                                                    <  1:1223530‑M1/33‑1 (MQ=255)
                               ccTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCAcc                                                                                                                    >  1:1098335/1‑150 (MQ=255)
                               ccTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCAcc                                                                                                                    >  1:205917/1‑150 (MQ=255)
                                cTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCa                                                                                                                   >  1:1258358/1‑150 (MQ=255)
                                cTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCa                                                                                                                   <  1:2043826/150‑1 (MQ=255)
                                cTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTCTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCa                                                                                                                   >  1:739371/1‑150 (MQ=255)
                                 tGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGTGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAg                                                                                                                  <  2:245509/150‑1 (MQ=255)
                                 tGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCAGGCCTTCGGTGGGCGGGTGGCGAATGGCGTTGCGCAACGGTTTTTCCAGGGCCTG‑GGCCAGGCTTTCCAGATGGGCCTGCACCAg                                                                                                                  <  2:882098/150‑1 (MQ=255)
                                 tGGCCCTTGGTCGCTCAGGCGCAGGCGCCAGCATGCGTCCTCGCGCCTTCCATCAAGGCTGACCGGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAg                                                                                                                  <  2:317079/150‑1 (MQ=39)
                                  ggCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAgg                                                                                                                 <  1:20365/150‑1 (MQ=255)
                                  ggCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAgg                                                                                                                 <  2:831160/150‑1 (MQ=255)
                                  ggCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAgg                                                                                                                 <  2:1294665/150‑1 (MQ=255)
                                   gCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGAt                                                                                                                               >  2:1117884/1‑135 (MQ=255)
                                   gCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGAt                                                                                                                               <  1:1117884/135‑1 (MQ=255)
                                    ctggtgaccgagccggtattggtgctttccgtgtgggaagccttgtgcgaggacgtctgtttcgaaagcggctgggaccgtgcgcgcctgccgtgctcacttggcaccgactGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCa                                                                                                               >  2:1223530‑M1/113‑150 (MQ=255)
                                      cTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGt                                                                                                             >  2:445181/1‑150 (MQ=255)
                                          gTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGt                                                                                                         <  2:1674530/150‑1 (MQ=255)
                                               gccggtattggtgctttccgtgtgggaagccttgtgcgaggacgtctgtttcgaaagcggctgggaccgtgcgcgcctgccgtgctcacttggcaccgactGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCa                                                                                                                   <  2:1692749‑M1/34‑1 (MQ=255)
                                                  ggCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTg                                                                                                 <  2:1137644/150‑1 (MQ=255)
                                                   gcgcAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGa                                                                                                >  2:637915/1‑150 (MQ=255)
                                                     gcAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGc                                                                                              <  1:1989371/150‑1 (MQ=255)
                                                      cAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCa                                                                                             <  1:1293559/150‑1 (MQ=255)
                                                       aGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTTGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCAc                                                                                            <  2:1370307/150‑1 (MQ=255)
                                                        ggtgctttccgtgtgggaagccttgtgcgaggacgtctgtttcgaaagcggctgggaccgtgcgcgcctgccgtgctcacttggcaccgactg                                                                                                                                                     >  2:1887159‑M1/93‑93 (MQ=255)
                                                        ggtgctttccgtgtgggaagccttgtgcgaggacgtctgtttcgaaagcggctgggaccgtgcgcgcctgccgtgctcacttggcaccgactg                                                                                                                                                     <  1:1887159‑M1/1‑1 (MQ=255)
                                                          tGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGc                                                                                         <  2:2028330/150‑1 (MQ=255)
                                                           gCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCa                                                                                        <  2:1665987/150‑1 (MQ=255)
                                                                 aTGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGgcgcg                                                                                  >  2:619498/1‑150 (MQ=255)
                                                                     gcCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACg                                                                              <  2:1258358/150‑1 (MQ=255)
                                                                      cccTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACgg                                                                             >  2:586149/1‑150 (MQ=255)
                                                                       ccTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGt                                                                            <  2:625793/150‑1 (MQ=255)
                                                                        cTCACGCCAGCCATGAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGCATGGCATTGCGCAACAGGTTTTCCGCGGCGTG‑GGCCAGGATCTCCAGATGGGACTGCACCAGGCAGTCGGTGCCAAGTGAGAACGGCGGGCTCACCCGGTc                                                                           >  2:111697/1‑150 (MQ=255)
                                                                         tCACGCCAGCCATCAAGGCTAACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTcc                                                                          >  2:2022161/1‑150 (MQ=255)
                                                                           aCGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGt                                                                                                  >  1:2228069/1‑124 (MQ=255)
                                                                           aCGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGt                                                                                                  <  2:2228069/124‑1 (MQ=255)
                                                                             gccagccaTCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTGCGGACA‑AAGAACCAGATGAGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGc                                                                      >  1:1621109/1‑150 (MQ=255)
                                                                                agccaTCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGc                                                                   >  2:418395/1‑150 (MQ=255)
                                                                                  ccaTCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCtt                                                                 <  2:1085376/150‑1 (MQ=255)
                                                                                  ccaTCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCtt                                                                 >  1:2007647/1‑150 (MQ=255)
                                                                                  ccaTCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCtt                                                                 >  1:2333611/1‑150 (MQ=255)
                                                                                     tCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCg                                                              >  2:2245834/1‑150 (MQ=255)
                                                                                       aaGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGaa                                                            >  2:2314584/1‑150 (MQ=255)
                                                                                         ggCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAAc                                                          >  2:1762414/1‑150 (MQ=255)
                                                                                          gtctgtttcgaaagcggctgggaccgtgcgcgcctgccgtgctcacttggcaccgactGCCTG‑GGCCAGGCTGTCCAGATTGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCa                                                                                             >  1:1950582‑M1/59‑114 (MQ=255)
                                                                                          gtctgtttcgaaagcggctgggaccgtgcgcgcctgccgtgctcacttggcaccgactGCCTG‑GGCCAGGCTGTCCAGATTGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCa                                                                                             <  2:1950582‑M1/56‑1 (MQ=255)
                                                                                            tGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGa                                                       <  1:2314584/150‑1 (MQ=255)
                                                                                            tGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGACAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCt                                                                  >  1:861766/1‑139 (MQ=255)
                                                                                            tGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGACAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCt                                                                  <  2:861766/139‑1 (MQ=255)
                                                                                             gACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGAc                                                      <  2:110990/150‑1 (MQ=255)
                                                                                             gACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGAc                                                      <  2:2007647/150‑1 (MQ=255)
                                                                                              aCCCGGTCGTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGgc                                                                                     <  1:738653/118‑1 (MQ=255)
                                                                                              aCCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGgc                                                                                     >  2:738653/1‑118 (MQ=255)
                                                                                               cccGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGt                                                    <  1:1457321/150‑1 (MQ=255)
                                                                                                ccGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTc                                                   >  1:391757/1‑150 (MQ=255)
                                                                                                  ggCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGAt                                                                                                                               <  1:1918431/72‑1 (MQ=255)
                                                                                                  ggCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGAt                                                                                                                               >  2:1918431/1‑72 (MQ=255)
                                                                                                   gCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTc                                                <  1:2245834/150‑1 (MQ=255)
                                                                                                     cTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGc                                              >  2:1633846/1‑150 (MQ=255)
                                                                                                             ggCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCt                                      >  1:969810/1‑150 (MQ=255)
                                                                                                              gCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCtt                                     >  2:225304/1‑150 (MQ=255)
                                                                                                                gAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTcc                                   <  1:1566565/150‑1 (MQ=255)
                                                                                                                 aGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTccc                                  <  1:586149/150‑1 (MQ=255)
                                                                                                                   tGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGgc                                                                                     <  2:80479/97‑1 (MQ=255)
                                                                                                                   tGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTACAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCcac                                >  1:2209403/1‑150 (MQ=255)
                                                                                                                       gAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGCCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACgg                            >  2:1618270/1‑150 (MQ=255)
                                                                                                                          tGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGaaa                         <  2:1322348/150‑1 (MQ=255)
                                                                                                                           ggCATGGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAg                        <  1:619498/150‑1 (MQ=255)
                                                                                                                             cATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGa                                                                                                <  1:2358236/76‑1 (MQ=255)
                                                                                                                             cATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGa                                                                                                >  2:2358236/1‑76 (MQ=255)
                                                                                                                             cATTGCGCAACAGGGTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCCCCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGcc                      >  2:128248/1‑149 (MQ=255)
                                                                                                                              aTTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTcc                                   >  2:639727/1‑136 (MQ=255)
                                                                                                                              aTTGCGCAACAGCTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTCCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTcc                                   <  1:639727/136‑1 (MQ=255)
                                                                                                                                     aaCAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATAcc              >  1:50393/1‑150 (MQ=255)
                                                                                                                                     aaCAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATAc               <  2:159411/149‑1 (MQ=255)
                                                                                                                                     aaCAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATAc               >  1:159411/1‑149 (MQ=255)
                                                                                                                                        aGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGc           <  1:1370570/150‑1 (MQ=255)
                                                                                                                                         ggTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCt          >  1:1090698/1‑150 (MQ=255)
                                                                                                                                          gTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTc         >  1:2088255/1‑150 (MQ=255)
                                                                                                                                          gTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTc         <  2:1621109/150‑1 (MQ=255)
                                                                                                                                          gTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTc         >  1:771783/1‑150 (MQ=255)
                                                                                                                                           ttttCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGgcgc                                                                                   <  1:1424084/75‑1 (MQ=255)
                                                                                                                                           ttttCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGgcgc                                                                                   >  2:1424084/1‑75 (MQ=255)
                                                                                                                                           ttttCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCg        <  1:16078/150‑1 (MQ=255)
                                                                                                                                               ccAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCa    <  1:637915/150‑1 (MQ=255)
                                                                                                                                                cAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCAc   >  1:139625/1‑150 (MQ=255)
                                                                                                                                                 aGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCGTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCAcc  >  2:932216/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GAAAATGCGCTCAAGGTCGGTATCCGGTACGCCTGGCCCTTGGTCGCTCAGGCGCAGGTGCCAGCATGCGCCCTCACGCCAGCCATCAAGGCTGACCCGGCCTTCGGTCGGCGAGTGGCGAATGGCATTGCGCAACAGGTTTTCCAGGGCCTG‑GGCCAGGCTGTCCAGATGGGCCTGCACCAGGCAGTCGGTGCCAAGTGAGCACGGCAGGCGCGCACGGTCCCAGCCGCTTTCGAAACAGACGTCCTCGCACAAGGCTTCCCACACGGAAAGCACCAATACCGGCTCGGTCACC  >  NC_002947/618822‑619116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.