New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1651584 =	106 (1.200)	7 (0.080)	7/232	NT	6.9%	coding (97/636 nt)	PP_1448	membrane protein
	?	NC_002947	1651608 =	88 (1.050)					coding (121/636 nt)	PP_1448	membrane protein

CACTGCAGAGCTTACCGAGGGCGACAGGAAAAAGCGTTTGCCACGGCCTTCCCTACCGAATGCGGCATAGCTGAGCACCGTCGCCACCAGGGTATTGGTCAGCACGGTGAAGTAGCCGAACACATTGATCAGGCCACCAATCAGGCTGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1651736‑1651584 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcctgATCAATGTGTTCGGCTACTTCACCGTGCTGACCAATACCCTGGTGGCGACGGTGCTCAGCTATGCCGCATTCGGTAGGGAAGGCCGTGGCAAACGCTTTTTCCTGTCGCCCTCGGTAAGCTCTGCAGTGGCCGCCAGTATCGTGC  >  NC_002947/1651608‑1651752                                                                                                                                                                                                                                                                                                            CACTGCAGAGCTTACCGAGGGCGACAGGAAAAAGCGTTTGCCACGGCCTTCCCTACCGAATGCGGCATAGCTGAGCACCGTCGCCACCAGGGTATTGGTCAGCACGGTGAAGTAGCCGAACACATTGATCAGGCCACCAATCAGGCTGGC                                                                                                                                                      >  1:2022141/1‑150   CTGCAGAGCTTACCGAGGGCGACAGGAAAAAGCGTTTGCCACGGCCTTCCCTACCGAATGCGGCATAGCTGAGCACCGTCGCCACCAGGGTATTGGTCAGCACGGTGAAGTAGCCGAACACATTGATCAGGCCACCAATCAGGCTGGCCT                                                                                                                                                    <  2:2100221/150‑1       AGAGCTTACCGAGGGCGACAGGAAAAAGCGTTTGCCACGGCCTTCCCTACCGAATGCGGCATAGCTGAGCACCGTCGCCACCAGGGTATTGGTCAGCACGGTGAAGTAGCCGAACACATTGATCAGGCCACCAATCAGGCCAGCCTGATt                                                                                                                                                <  2:1621238/150‑2                                           ACGGCCTTCCCTACCGAATGCGGCATAGCTGAGCACCGTCGCCACCAGGGTATTGGTCAGCACGGTGAAGTAGCCGAACACATTGATCAGGCCACCAATCAGGCTGGC                                                                                                                                                      >  1:1482183/1‑108                                           ACGGCCTTCCCTACCGAATGCGGCATAGCTGAGCACCGTCGCCACCAGGGTATTGGTCAGCACGGTGAAGTAGCCGAACACATTGATCAGGCCACCAATCAGGCTGGC                                                                                                                                                      <  2:1482183/108‑1                                                   CCCTACCGAATGCGGCCTAGCTGAGCACCGTCGCCACCAGGGTATTGGTCAGCACGGTGAAGTAGCCGAACACATTGATCAGGACACCAATCAGGCTGGC                                                                                                                                                      >  1:2066207/1‑100                                                   CCCTACCGAATGCGGCCTAGCTGAGCACCGTCGCCACCAGGGTATTGGTCAGCACGGTGAAGTAGCCGAACACATTGATCAGGACACCAATCAGGCTGGC                                                                                                                                                      <  2:2066207/100‑1                                                                             ACCGTCGCCACCAGGGTATTGGTCAGCACGGTGAAGTAGCCGAACACATTGATCAGGCCACTAATCAGGCTGGC                                                                                                                                                      >  2:576120/1‑74                                                                             ACCGTCGCCACCAGGGTATTGGTCAGCACGGTGAAGTAGCCGAACACATTGATCAGGCCACCAATCAGGCTGGC                                                                                                                                                      <  1:576120/74‑1                                                                                                                     CGAACACATTGATCAGGCCACCAATCAGGCTGGCCTGTTCAATGTGTTCGGCTACTTCACCGTGCTGACCAATACCCTGGTGGCGACGGTGCTCAGCTATGCCGCATTCGGTAGGGAAGGCCGTGGCAAACGCTTTTTCCTGTCGCCCTC                                  >  2:2301313/1‑150                                                                                                                            ATTGATCAGGCCACCAATCAGGCTGGCCTGATCAATGTGTTCGGCTACTTCACCGTGCTGACCAATACCCTGGTGGCGACGGTGCTCAGCTATGCCGCATTCGGTAGGGAA                                                                  >  1:1182289/1‑111                                                                                                                            ATTGATCAGGCCACCAATCAGGCTGGCCTGATCAATGTGTTCGGCTACTTCACCGTGCTGACCAATACCCTGGTGGCGACGGTGCTCAGCTATGCCGCATTCGGTAGGGAA                                                                  <  2:1182289/111‑1                                                                                                                               GATCAGGCCACCAATCAGGCTGGCCTGATCAATGTGTTCGGCTACTTCACCGTGCTGACCAATACCCTGGTGGCGACGGTGCTCAGCTATGCTGCATTCGGTAGGGAAGGCCGTGGCAAACGCTTTTTCCTGTCGCCCTCGGTAAGCTCT                        >  1:637252/1‑150                                                                                                                                 TCAGGCCACCAATCAGGCTGGCCTGATCAATGTGTTCGGC                                                                                                                                    >  1:381094/1‑40                                                                                                                                 TCAGGCCACCAATCAGGCTGGCCTGATCAATGTGTTCGGC                                                                                                                                    <  2:381094/40‑1                                                                                                                                  CAGGCCACCAATCAGGCTGGCCTGATCAATGTGTTCGGCTACTTCACCGTGCTGACCAATACCCTGGTGGCGACGGTGCTCAGCTATGCCGCATTCGGGAGGGAAGGCCGTGGCAAACGCTTTTTCCTGTCGCCCTCGGTAAGCTCTCCA                     >  1:832874/1‑150                                                                                                                                                    nGCCTGATCAATGTGTTCGGCTACTTCACCGTGCTGACCAATACCCTGGTGGCGACGGTGCTCAGCTATGCCGCATTCGGTAGGGAAGGCCGTGGCAAACGCTTTTTCCTGTCGCCCTCGGTAAGCTCTGCAGTGGCCGCCAGTATCGTG   >  2:1710909/2‑150                                                                                                                                                     GCCTGATCAATGTGTTCGGCTACTTCACCGTGCTGACCAATACCCTGGTGGCGACGGTGCTCAGCTATGCCGCATTCGGTAGGGAAGGCCGTGGCAAACGCTTTTTCCTGTCGCCCTCGGTAAGCTCTGCAGTGGCCGCCAGTATCGTGC  >  2:2146943/1‑150                                                                                                                                                     GCCTGATCAATGTGTTCGGCTACTTCACCGTGCTGACCAATACCCTGGTGGCGACGGTGCTCAGCTATGCCGCATTCGGTAGGGAAGGCCGTGGCAAACGCTTTTTCCTGTCGCCCTCGGTAAGCTCTGCAGTGGCCGCCAGTATCGTGC  >  2:595678/1‑150                                                                                                                                                     GCCTGATCAATGTGTTCGGCTACTTCACCGTGCTGACCAATACCCTGGTGGCGACGGTGCTCAGCTATGCCGCATTCGGTAGGGAAGGCCGTGGCAAACG                                                    >  2:1373217/1‑100                                                                                                                                                     GCCTGATCAATGTGTTCGGCTACTTCACCGTGCTGACCAATACCCTGGTGGCGACGGTGCTCAGCTATGCCGCATTCGGTAGGGAAGGCCGTGGCAAACG                                                    <  1:1373217/100‑1                                                                                                                                                                                                                                                                                                            CACTGCAGAGCTTACCGAGGGCGACAGGAAAAAGCGTTTGCCACGGCCTTCCCTACCGAATGCGGCATAGCTGAGCACCGTCGCCACCAGGGTATTGGTCAGCACGGTGAAGTAGCCGAACACATTGATCAGGCCACCAATCAGGCTGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1651736‑1651584 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcctgATCAATGTGTTCGGCTACTTCACCGTGCTGACCAATACCCTGGTGGCGACGGTGCTCAGCTATGCCGCATTCGGTAGGGAAGGCCGTGGCAAACGCTTTTTCCTGTCGCCCTCGGTAAGCTCTGCAGTGGCCGCCAGTATCGTGC  >  NC_002947/1651608‑1651752

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.