| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4801631 | 76 (0.860) | 5 (0.060) | 5/234 | NT | 6.1% | coding (451/627 nt) | PP_4229 | hypothetical protein |
| ? | NC_002947 | = 4801643 | 81 (0.960) | coding (463/627 nt) | PP_4229 | hypothetical protein | |||||
CGGTTCGGTGCTGACCATCGCGGCCTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4801477‑4801631‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagggTGCCGAGCCGTTCCCTGGCAGGTTCGAACAGGTCGTCGAAGTAGACGCACTCGGTCATCAGCCACATGAGCAAACCGTGGATCTTGTTGTCCCGTTCTTCGTCGCCTGAGCTGTGAGCGCCATCGAGGTAACGGGAATGGTAGG < NC_002947/4801643‑4801500 CGGTTCGGTGCTGACCATCGCGGCCTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑C > 1:1175530/1‑150CGGTTCGGTGCTGACCATCGCGGCCTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑C > 1:224767/1‑150 GTTCGGTGCTGACCATCGCGGCCTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCA < 2:771202/150‑1 TCGGTGCTGACCATCGCGGCCTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGG < 2:2270240/150‑1 CCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCCAGGGTGCCGAGCCGTTCCCTGGCAG < 2:2229093/150‑1 GTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCA > 1:940917/1‑117 GTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCA < 2:940917/117‑1 TTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGTGCCGAGCCGTTCCCTGGCAGGTTCGAACAG > 1:1573048/1‑150 CTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCA < 1:1575279/112‑1 CTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCA > 2:1575279/1‑112 TGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGTGCCGAGCCGTTCCCTGGCAGGTTCGAAC < 1:1722695/77‑1 TGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGTGCCGAGCCGTTCCCTGGCAGGTTCGAAC > 2:1722695/1‑77 CCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGCAGGTTCGAACAGGTCGTCGAAGTAGACGCACTCGGTCATCAGCCACATGAGCAAACCGTGGATCTTGTTGTCCCGTTCTTCGTCGCCTGAGCTGTGAGCGCCATCGAGGTA > 2:1573048/1‑150 CCAGGGTGCCGAGCCGTTCCCTGGCAGGTTCGAACAGGTCGTCGAAGTAGACGCACTCGGTCATCAGCCACATGAGCAAACCGTGGATCTTGTTGTCCCGTTCTTCGTCGCCTGAGCTGTGAGCGCCATCGAGGTAACGGGAATGGTAGG > 1:2111837/1‑150 CAGGGTGCCGAGCCGTTCCCTGGCAGGTTCGAACAGGTCGTCGAAGTAGACGCACTCGGTCATCAGCCACATGAGCAAACCGTGGATCTTGTTGTCCCGTTCTTCGTCGCCTGAGCTGTGAGC < 1:1960328/123‑1 CAGGGTGCCGAGCCGTTCCCTGGCAGGTTCGAACAGGTCGTCGAAGTAGACGCACTCGGTCATCAGCCACATGAGCAAACCGTGGATCTTGTTGTCCCGTTCTTCGTCGCCTGAGCTGTGAGC > 2:1960328/1‑123 CGGTTCGGTGCTGACCATCGCGGCCTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4801477‑4801631‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagggTGCCGAGCCGTTCCCTGGCAGGTTCGAACAGGTCGTCGAAGTAGACGCACTCGGTCATCAGCCACATGAGCAAACCGTGGATCTTGTTGTCCCGTTCTTCGTCGCCTGAGCTGTGAGCGCCATCGAGGTAACGGGAATGGTAGG < NC_002947/4801643‑4801500 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |