New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 480163176 (0.860)5 (0.060) 5/234 NT 6.1% coding (451/627 nt) PP_4229 hypothetical protein
?NC_002947 = 4801643 81 (0.960)coding (463/627 nt) PP_4229 hypothetical protein

CCTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGAACCCTATGAACTCACTG  >  NC_002947/4801500‑4801790
                                                                                                                                               |                                                                                                                                                   
ccTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCAccctgg                                                                                                                                               >  1:2111837‑M2/1‑144 (MQ=255)
 cTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTggg                                                                                                                                              <  1:389019/150‑1 (MQ=255)
 cTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTggg                                                                                                                                              >  2:389019/1‑150 (MQ=255)
   aCCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTggg                                                                                                                                              >  1:418544/1‑148 (MQ=255)
   aCCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTggg                                                                                                                                              <  2:418544/148‑1 (MQ=255)
      aTTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTTGGCTCAg                                                                                                                                         >  1:2226040/1‑150 (MQ=255)
      aTTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAg                                                                                                                                         >  1:574565/1‑150 (MQ=255)
        tCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACCACGAGGTCCACGATTTGCTTATCTGACTGATGATCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGAc                                                                                                                                       <  1:285493/150‑1 (MQ=255)
          ccGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGa                                                                                                                                     >  2:1126801/1‑150 (MQ=255)
            gTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGaaa                                                                                                                                   <  1:2017063/150‑1 (MQ=255)
              tACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGTGCCGAGCCGTTccctggcaggttcgaacagg                                                                                                                                 >  2:1573048‑M2/1‑130 (MQ=255)
                 cTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGACTGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTAt                                                                                                                              >  1:1831513/1‑150 (MQ=255)
                 cTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCCACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAATTGTAt                                                                                                                              <  2:1730802/150‑1 (MQ=255)
                 cTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCAACGGGTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACTACCTGTTCGAACCTACCAGGGAACGGCTCCGCACCCTGGGCTCAGACGGAATGTAt                                                                                                                              >  1:253077/1‑150 (MQ=255)
                          gcTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCAccctg                                                                                                                                                >  2:1960328‑M2/1‑118 (MQ=255)
                          gcTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCAccctg                                                                                                                                                <  1:1960328‑M2/123‑6 (MQ=255)
                          gcTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTc                                                                                                                     >  1:326736/1‑150 (MQ=255)
                              acaGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCg                                                                                                                 >  1:1549362/1‑150 (MQ=255)
                              acaGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCg                                                                                                                 >  1:509807/1‑150 (MQ=255)
                                  cTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCtt                                                                                                             >  1:1114549/1‑150 (MQ=255)
                                  cTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCtt                                                                                                             <  2:1030271/150‑1 (MQ=255)
                                     aGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGTCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGAt                                                                                                          <  2:1846606/150‑1 (MQ=255)
                                       gCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGc                                                                                                        >  1:1094992/1‑150 (MQ=255)
                                         gacgaAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTg                                                                                                      >  2:464530/1‑150 (MQ=255)
                                         gacgaAGAAAGGGACAACAAGATCCACGATTTGCTTATTTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTg                                                                                                      <  2:1831513/150‑1 (MQ=255)
                                            gaagaaCGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGa                                                                                                   >  2:1073101/1‑150 (MQ=255)
                                             aagaaCGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAg                                                                                                  <  2:224767/150‑1 (MQ=255)
                                             aagaaCGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAg                                                                                                  <  2:1114549/150‑1 (MQ=255)
                                              agaaCGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAgg                                                                                                 <  2:326736/150‑1 (MQ=255)
                                                  cGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCa                                                                                             <  2:690393/150‑1 (MQ=255)
                                                    ggACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGa                                                                                           <  2:1379010/150‑1 (MQ=255)
                                                        aacaaGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGc                                                                                       >  1:1131073/1‑150 (MQ=255)
                                                           aaGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGa                                                                                                           >  2:46407/1‑127 (MQ=255)
                                                           aaGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGa                                                                                                           <  1:46407/127‑1 (MQ=255)
                                                             gATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTTGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGa                                                                                  <  2:2226040/150‑1 (MQ=255)
                                                             gATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGa                                                                                  <  2:509807/150‑1 (MQ=255)
                                                                ccACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCATTGATACTGGCACGCCCAGACAGCCTTGAGCg                                                                               >  2:1161311/1‑150 (MQ=255)
                                                                 cACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAGCGGCTCCGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGCGGCCCAGACAGCCTTGAGCGt                                                                              <  2:549728/150‑1 (MQ=255)
                                                                  aCGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTc                                                                             <  2:574565/150‑1 (MQ=255)
                                                                  aCGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTc                                                                             <  2:1549362/150‑1 (MQ=255)
                                                                   cGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCt                                                                            <  1:464530/150‑1 (MQ=255)
                                                                    ggTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCtt                                                                           <  2:1679447/150‑1 (MQ=255)
                                                                             aTGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCt                                                                   >  2:911501/1‑149 (MQ=255)
                                                                             aTGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCt                                                                   <  1:911501/149‑1 (MQ=255)
                                                                                tgGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGa                                                                                  <  1:470343/131‑1 (MQ=255)
                                                                                tgGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGa                                                                                  >  2:470343/1‑131 (MQ=255)
                                                                                  gCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATgg                                                                                                                            <  2:2198225/87‑1 (MQ=255)
                                                                                  gCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATgg                                                                                                                            >  1:2198225/1‑87 (MQ=255)
                                                                                      atgaCCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTg                                                         <  2:878051/150‑1 (MQ=255)
                                                                                         aCCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAg                                                      >  1:2229176/1‑150 (MQ=255)
                                                                                          ccGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACATCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGc                                                     <  1:1126801/150‑1 (MQ=255)
                                                                                           cGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCa                                                    >  1:1100749/1‑150 (MQ=255)
                                                                                             aGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATc                                                  <  2:1094992/150‑1 (MQ=255)
                                                                                                  gTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAg                                                      <  2:1732507/141‑1 (MQ=255)
                                                                                                  gTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAg                                                      >  1:1732507/1‑141 (MQ=255)
                                                                                                  gTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGtg                                             >  1:1103925/1‑150 (MQ=255)
                                                                                                   tCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGtgc                                            <  1:1778527/150‑1 (MQ=255)
                                                                                                    cTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGtgct                                           <  2:852223/150‑1 (MQ=255)
                                                                                                      aCTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGtgctgc                                         <  1:1719661/150‑1 (MQ=255)
                                                                                                       cTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGc                                                                                <  2:783069/110‑1 (MQ=255)
                                                                                                       cTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGc                                                                                >  1:783069/1‑110 (MQ=255)
                                                                                                        ttCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGccc                                                                                              <  1:2077322/95‑1 (MQ=255)
                                                                                                        ttCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGccc                                                                                              >  2:2077322/1‑95 (MQ=255)
                                                                                                        ttCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCtt                                       >  2:423302/1‑150 (MQ=255)
                                                                                                           gacgacCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTTAAAAGCTGAAGGCAGTg                                                         >  2:1810159/1‑129 (MQ=255)
                                                                                                           gacgacCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTTAAAAGCTGAAGGCAGTg                                                         <  1:1810159/129‑1 (MQ=255)
                                                                                                           gacgacCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTcc                                    >  2:2223862/1‑150 (MQ=255)
                                                                                                            acgacCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTccc                                   >  1:50315/1‑150 (MQ=255)
                                                                                                               acCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAAc                                <  2:1318141/150‑1 (MQ=255)
                                                                                                                 cTGTTCGAACCTGCCAGGGAACGGCTCGGCAccctggcaggttcgaacaggtcgtcgaagtagacgcactcggtcatcagccacatgagcaaaccgtggatcttgttgtcccgttcttcgtcgcctgagctgtgagcgccatcgaggtaa                              >  1:1573048‑M2/1‑31 (MQ=255)
                                                                                                                   gTTCGAACCTGCCAGGGAACGGCTCGGCAccctggcaggttcgaacaggtcgtcgaagtagacgcactcggtcatca                                                                                                     >  2:1722695‑M2/1‑29 (MQ=255)
                                                                                                                   gTTCGAACCTGCCAGGGAACGGCTCGGCAccctggcaggttcgaacaggtcgtcgaagtagacgcactcggtcatca                                                                                                     <  1:1722695‑M2/77‑49 (MQ=255)
                                                                                                                    ttCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGc                           <  1:2084909/150‑1 (MQ=255)
                                                                                                                    ttCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGc                           <  2:2229176/150‑1 (MQ=255)
                                                                                                                       gAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTg                                                         >  1:2052540/1‑117 (MQ=255)
                                                                                                                       gAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTg                                                         <  2:2052540/117‑1 (MQ=255)
                                                                                                                         aCCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACt                      >  1:227565/1‑150 (MQ=255)
                                                                                                                           cTGCCAGGGAACGGCTCGGCAccctgggcaggttcgaacaggtcgtcgaagtagacgcactcggtcatcagccacatgagcaaaccgtggatcttgttgtcccgttcttcgtcgcctgagctgtgagcgccatcgaggtaacgggaatgg                    <  2:2229093‑M2/150‑130 (MQ=255)
                                                                                                                            tGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGa                   >  2:1859573/1‑150 (MQ=255)
                                                                                                                            tGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACAAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTACCCAACTGAGCGAACTCGa                   >  2:1587544/1‑150 (MQ=255)
                                                                                                                               cAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATc                                                  <  2:594766/116‑1 (MQ=255)
                                                                                                                               cAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATc                                                  >  1:594766/1‑116 (MQ=255)
                                                                                                                                 gggAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTc                                                                             >  2:527452/1‑87 (MQ=255)
                                                                                                                                 gggAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTc                                                                             <  1:527452/87‑1 (MQ=255)
                                                                                                                                   gAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGAACCCTAt            <  2:227565/150‑1 (MQ=255)
                                                                                                                                         cTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGAACCCTATGAACTc      >  1:1680776/1‑150 (MQ=255)
                                                                                                                                         cTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGAACCCTATGAACTc      >  1:2167625/1‑150 (MQ=255)
                                                                                                                                          tCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTgg                                               >  1:135273/1‑108 (MQ=255)
                                                                                                                                          tCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTgg                                               <  2:135273/108‑1 (MQ=255)
                                                                                                                                          tCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGAACCCTAt            <  1:1577263/143‑1 (MQ=255)
                                                                                                                                          tCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGAACCCTAt            >  2:1577263/1‑143 (MQ=255)
                                                                                                                                          tCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGAACCCTATGAACTCa     >  2:809567/1‑150 (MQ=255)
                                                                                                                                          tCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGAACCCTATGAACTCa     >  2:88968/1‑150 (MQ=255)
                                                                                                                                           cGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGAACCCTATGAACTCAc    <  1:1073101/150‑1 (MQ=255)
                                                                                                                                             gCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGAACCCTATGAACTCACTg  <  1:1161311/150‑1 (MQ=255)
                                                                                                                                             gCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGAACCCTATGAACTCACTg  <  2:1103925/150‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                   
CCTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGAACCCTATGAACTCACTG  >  NC_002947/4801500‑4801790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.