New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 480163176 (0.860)5 (0.060) 5/234 NT 6.1% coding (451/627 nt) PP_4229 hypothetical protein
?NC_002947 = 4801643 81 (0.960)coding (463/627 nt) PP_4229 hypothetical protein

Only 100 of 104 total aligned reads displayed.

TGCTGACCATCGCGGCCTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGAACCCTAT  >  NC_002947/4801485‑4801780
                                                                                                                                                   |                                                                                                                                                     
 gCTGACCATCGCGGCCTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACg                                                                                                                                                   >  1:690393/1‑150 (MQ=255)
  cTGACCATCGCGGCCTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACgg                                                                                                                                                  <  2:511523/150‑1 (MQ=255)
   tGACCATCGCGGCCTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGc                                                                                                                                                 <  1:1370238/150‑1 (MQ=255)
   tGACCATCGCGGCCTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGc                                                                                                                                                 <  1:117652/150‑1 (MQ=255)
               ccTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCAccctgg                                                                                                                                     >  1:2111837‑M2/1‑144 (MQ=255)
                cTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTggg                                                                                                                                    >  2:389019/1‑150 (MQ=255)
                cTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTggg                                                                                                                                    <  1:389019/150‑1 (MQ=255)
                  aCCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTggg                                                                                                                                    >  1:418544/1‑148 (MQ=255)
                  aCCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTggg                                                                                                                                    <  2:418544/148‑1 (MQ=255)
                   ccATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTGCCCAGGGtgccgagccgttccctggcag                                                                                                                                  <  2:2229093‑M1/150‑22 (MQ=255)
                     aTTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTTGGCTCAg                                                                                                                               >  1:2226040/1‑150 (MQ=255)
                     aTTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAg                                                                                                                               >  1:574565/1‑150 (MQ=255)
                      ttCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGaa                                                                                                                                                     >  2:1213230/1‑127 (MQ=255)
                      ttCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGaa                                                                                                                                                     <  1:1213230/127‑1 (MQ=255)
                       tCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACCACGAGGTCCACGATTTGCTTATCTGACTGATGATCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGAc                                                                                                                             <  1:285493/150‑1 (MQ=255)
                         ccGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGa                                                                                                                           >  2:1126801/1‑150 (MQ=255)
                           gTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGaaa                                                                                                                         <  1:2017063/150‑1 (MQ=255)
                            ttACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGtgccgagccgttccctggcaggttcgaacag                                                                                                                        >  1:1573048‑M1/1‑119 (MQ=255)
                             tACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGTGCCGAGCCGTTccctggcaggttcgaacagg                                                                                                                       >  2:1573048‑M2/1‑130 (MQ=255)
                                cTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑ACTGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTAt                                                                                                                    >  1:1831513/1‑150 (MQ=255)
                                cTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCCACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAATTGTAt                                                                                                                    <  2:1730802/150‑1 (MQ=255)
                                cTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCAACGGGTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACTACCTGTTCGAACCTA‑CCAGGGAACGGCTCCGCACCCTGGGCTCAGACGGAATGTAt                                                                                                                    >  1:253077/1‑150 (MQ=255)
                                       gcgcTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCgg                                                                                                                                             <  2:1068654/118‑1 (MQ=255)
                                       gcgcTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCgg                                                                                                                                             >  1:1068654/1‑118 (MQ=255)
                                         gcTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAAc                                                                                                                                                    >  1:869820/1‑109 (MQ=255)
                                         gcTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAAc                                                                                                                                                    <  2:869820/109‑1 (MQ=255)
                                         gcTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCAccctg                                                                                                                                      >  2:1960328‑M2/1‑118 (MQ=255)
                                         gcTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCAccctg                                                                                                                                      <  1:1960328‑M2/123‑6 (MQ=255)
                                         gcTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTc                                                                                                           >  1:326736/1‑150 (MQ=255)
                                             acaGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCg                                                                                                       >  1:1549362/1‑150 (MQ=255)
                                             acaGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCg                                                                                                       >  1:509807/1‑150 (MQ=255)
                                                 cTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCtt                                                                                                   <  2:1030271/150‑1 (MQ=255)
                                                 cTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCtt                                                                                                   >  1:1114549/1‑150 (MQ=255)
                                                    aGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGTCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGAt                                                                                                <  2:1846606/150‑1 (MQ=255)
                                                      gCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGc                                                                                              >  1:1094992/1‑150 (MQ=255)
                                                        gacgaAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTg                                                                                            >  2:464530/1‑150 (MQ=255)
                                                        gacgaAGAAAGGGACAACAAGATCCACGATTTGCTTATTTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTg                                                                                            <  2:1831513/150‑1 (MQ=255)
                                                            aagaaCGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAg                                                                                        <  2:1114549/150‑1 (MQ=255)
                                                            aagaaCGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAg                                                                                        <  2:224767/150‑1 (MQ=255)
                                                             agaaCGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAgg                                                                                       <  2:326736/150‑1 (MQ=255)
                                                                 cGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCa                                                                                   <  2:690393/150‑1 (MQ=255)
                                                                   ggACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGa                                                                                 <  2:1379010/150‑1 (MQ=255)
                                                                       aacaaGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGc                                                                             >  1:1131073/1‑150 (MQ=255)
                                                                          aaGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGa                                                                                                 <  1:46407/127‑1 (MQ=255)
                                                                          aaGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGa                                                                                                 >  2:46407/1‑127 (MQ=255)
                                                                            gATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTTGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGa                                                                        <  2:2226040/150‑1 (MQ=255)
                                                                            gATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGa                                                                        <  2:509807/150‑1 (MQ=255)
                                                                               ccACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCATTGATACTGGCACGCCCAGACAGCCTTGAGCg                                                                     >  2:1161311/1‑150 (MQ=255)
                                                                                cACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAGCGGCTCCGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGCGGCCCAGACAGCCTTGAGCGt                                                                    <  2:549728/150‑1 (MQ=255)
                                                                                 aCGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTc                                                                   <  2:1549362/150‑1 (MQ=255)
                                                                                 aCGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTc                                                                   <  2:574565/150‑1 (MQ=255)
                                                                                  cGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCt                                                                  <  1:464530/150‑1 (MQ=255)
                                                                                   ggTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCtt                                                                 <  2:1679447/150‑1 (MQ=255)
                                                                                            aTGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCt                                                         <  1:911501/149‑1 (MQ=255)
                                                                                               tgGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGa                                                                        >  2:470343/1‑131 (MQ=255)
                                                                                               tgGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGa                                                                        <  1:470343/131‑1 (MQ=255)
                                                                                                 gCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATgg                                                                                                                  <  2:2198225/87‑1 (MQ=255)
                                                                                                 gCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATgg                                                                                                                  >  1:2198225/1‑87 (MQ=255)
                                                                                                   tgatgaCCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGtgccgagccgttccctggcaggttcgaac                                                                                                                          <  1:1722695‑M1/77‑30 (MQ=255)
                                                                                                   tgatgaCCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGtgccgagccgttccctggcaggttcgaac                                                                                                                          >  2:1722695‑M1/1‑48 (MQ=255)
                                                                                                     atgaCCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTg                                               <  2:878051/150‑1 (MQ=255)
                                                                                                        aCCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAg                                            >  1:2229176/1‑150 (MQ=255)
                                                                                                         ccGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACATCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGc                                           <  1:1126801/150‑1 (MQ=255)
                                                                                                          cGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCa                                          >  1:1100749/1‑150 (MQ=255)
                                                                                                            aGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATc                                        <  2:1094992/150‑1 (MQ=255)
                                                                                                                 gTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAg                                            <  2:1732507/141‑1 (MQ=255)
                                                                                                                 gTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAg                                            >  1:1732507/1‑141 (MQ=255)
                                                                                                                 gTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGtg                                   >  1:1103925/1‑150 (MQ=255)
                                                                                                                  tCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGtgc                                  <  1:1778527/150‑1 (MQ=255)
                                                                                                                   cTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGtgct                                 <  2:852223/150‑1 (MQ=255)
                                                                                                                     aCTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGtgctgc                               <  1:1719661/150‑1 (MQ=255)
                                                                                                                      cTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGc                                                                      >  1:783069/1‑110 (MQ=255)
                                                                                                                      cTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGc                                                                      <  2:783069/110‑1 (MQ=255)
                                                                                                                       ttCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGccc                                                                                    >  2:2077322/1‑95 (MQ=255)
                                                                                                                       ttCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGccc                                                                                    <  1:2077322/95‑1 (MQ=255)
                                                                                                                       ttCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCtt                             >  2:423302/1‑150 (MQ=255)
                                                                                                                          gacgacCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTTAAAAGCTGAAGGCAGTg                                               >  2:1810159/1‑129 (MQ=255)
                                                                                                                          gacgacCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTTAAAAGCTGAAGGCAGTg                                               <  1:1810159/129‑1 (MQ=255)
                                                                                                                          gacgacCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTcc                          >  2:2223862/1‑150 (MQ=255)
                                                                                                                           acgacCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTccc                         >  1:50315/1‑150 (MQ=255)
                                                                                                                              acCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAAc                      <  2:1318141/150‑1 (MQ=255)
                                                                                                                               ccTGTTCGAACCTG‑CCAGGGaacggctcggcaccctggcaggttcgaacaggtcgtcgaagtagacgcactcggtcatcagccacatgagcaaaccgtggatcttgttgtcccgttcttcgtcgcctgagctgtgagcgccatcgaggta                     >  2:1573048‑M1/1‑20 (MQ=255)
                                                                                                                                cTGTTCGAACCTG‑CCAGGGAACGGCTCGGCAccctggcaggttcgaacaggtcgtcgaagtagacgcactcggtcatcagccacatgagcaaaccgtggatcttgttgtcccgttcttcgtcgcctgagctgtgagcgccatcgaggtaa                    >  1:1573048‑M2/1‑31 (MQ=255)
                                                                                                                                  gTTCGAACCTG‑CCAGGGAACGGCTCGGCAccctggcaggttcgaacaggtcgtcgaagtagacgcactcggtcatca                                                                                           <  1:1722695‑M2/77‑49 (MQ=255)
                                                                                                                                  gTTCGAACCTG‑CCAGGGAACGGCTCGGCAccctggcaggttcgaacaggtcgtcgaagtagacgcactcggtcatca                                                                                           >  2:1722695‑M2/1‑29 (MQ=255)
                                                                                                                                   ttCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGc                 <  2:2229176/150‑1 (MQ=255)
                                                                                                                                      gAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTg                                               <  2:2052540/117‑1 (MQ=255)
                                                                                                                                      gAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTg                                               >  1:2052540/1‑117 (MQ=255)
                                                                                                                                        aCCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACt            >  1:227565/1‑150 (MQ=255)
                                                                                                                                          cTG‑CCAGGGAACGGCTCGGCAccctgggcaggttcgaacaggtcgtcgaagtagacgcactcggtcatcagccacatgagcaaaccgtggatcttgttgtcccgttcttcgtcgcctgagctgtgagcgccatcgaggtaacgggaatgg          <  2:2229093‑M2/150‑130 (MQ=255)
                                                                                                                                           tG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGa         >  2:1859573/1‑150 (MQ=255)
                                                                                                                                           tG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACAAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTACCCAACTGAGCGAACTCGa         >  2:1587544/1‑150 (MQ=255)
                                                                                                                                              ccAGGGtgccgagccgttccctggcaggttcgaacaggtcgtcgaagtagacgcactcggtcatcagccacatgagcaaaccgtggatcttgttgtcccgttcttcgtcgcctgagctgtgagcgccatcgaggtaacgggaatggtagg       >  1:2111837‑M1/1‑6 (MQ=255)
                                                                                                                                               cAGGGtgccgagccgttccctggcaggttcgaacaggtcgtcgaagtagacgcactcggtcatcagccacatgagcaaaccgtggatcttgttgtcccgttcttcgtcgcctgagctgtgagc                                 <  1:1960328‑M1/123‑119 (MQ=255)
                                                                                                                                               cAGGGtgccgagccgttccctggcaggttcgaacaggtcgtcgaagtagacgcactcggtcatcagccacatgagcaaaccgtggatcttgttgtcccgttcttcgtcgcctgagctgtgagc                                 >  2:1960328‑M1/1‑5 (MQ=255)
                                                                                                                                               cAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATc                                        <  2:594766/116‑1 (MQ=255)
                                                                                                                                               cAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATc                                        >  1:594766/1‑116 (MQ=255)
                                                                                                                                                 gggAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTc                                                                   >  2:527452/1‑87 (MQ=255)
                                                                                                                                                 gggAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTc                                                                   <  1:527452/87‑1 (MQ=255)
                                                                                                                                                   gAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGAACCCTAt  <  2:227565/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
TGCTGACCATCGCGGCCTACCATTCCCGTTACCTCGATGGCGCTCACAGCTCAGGCGACGAAGAACGGGACAACAAGATCCACGGTTTGCTCATGTGGCTGATGACCGAGTGCGTCTACTTCGACGACCTGTTCGAACCTG‑CCAGGGAACGGCTCGGCACCCTGGGCTCAGACGAAATGTATGGCTTTGTCCCCGCCTTGATGCTGGGAGGCCCAGACAGCCTTGAGCGTCTTGAAAAGCTGAAGGCAGTGGAGCATCTGGTGCTGCTTTCCCAACTGAGCGAACTCGAACCCTAT  >  NC_002947/4801485‑4801780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.