New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5115388 =95 (1.070)5 (0.060) 4/230 NT 5.7% coding (446/861 nt) PP_4500 TrpH family protein
?NC_002947 5115494 = 78 (0.940)coding (340/861 nt) PP_4500 TrpH family protein

Only 100 of 112 total aligned reads displayed.

GTAGTGCATGGGATGCGCCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGC  >  NC_002947/5115240‑5115534
                                                                                                                                                     |                                                                                                                                                  
gtcctgcacgtggggcggcgcgaccatccatgtgctgggttatgacttcccactcgacgcaccgccactgctggcggcgattcaagcgctgcaccacggccgctggcttcgtgccgaagaaatcgacagacggctggcggccaagggcat                                                                                                                                                    <  1:1742026‑M1/1‑1 (MQ=255)
gtcctgcacgtggggcggcgcgaccatccatgtgctgggttatgacttcccactcgacgcaccgccactgctggcggcgattcaagcgctgcaccacggccgctggctgcgtgccgaagaaatcgacagacggctggcggccaagggcat                                                                                                                                                    <  1:934566‑M1/1‑1 (MQ=255)
 tcctgcacgtggggcggcgcgaccatccatgtgctgggttatgacttcccactcgacgcaccgccactgctggcggcgattcaagcgctgcaccacggccgctggctgcgtgccgaagaaatcgacagacggctggcggccaagggcaTg                                                                                                                                                   <  1:179081‑M1/2‑1 (MQ=255)
 tcctgcacgtggggcggcgcgaccatccatgtgctgggttatgacttcccactcgacgcaccgccactgctggcggcgattcaagcgctgcaccacggccgctggctgcgtgccgaagaaatcgacagacggctggcggccaagggcaTg                                                                                                                                                   <  2:1017649‑M1/2‑1 (MQ=255)
  aGTGCATGGGATGCGCCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTgcc                                                                                                                                                 >  1:413920/1‑150 (MQ=255)
   ctgcacgtggggcggcgcgaccatccatgtgctgggttatgacttcccactcgacgcaccgccactgctggcggcgattcaagcgctgcaccacggccgctggctgcgtgccgaagaaatctacagacggctggcggccaagggcaTgcc                                                                                                                                                 <  2:194688‑M1/4‑1 (MQ=255)
   ctgcacgtggggcggcgcgaccatccatgtgctgggttatgacttcccactcgacgcaccgccactgctggcggcgattcaagcgctgcaccacggccgctggctgcgtgccgaagaaatcgacagacggctggcggccaagggcaTgcc                                                                                                                                                 <  1:1226460‑M1/4‑1 (MQ=255)
    tGCATGGGATGCGCCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTgcccg                                                                                                                                               >  1:134761/1‑150 (MQ=255)
     gcacgtggggcggcgcgaccatccatgtgctgggttatgacttcccactcgacgcaccgccactgctggcggcgattcaagcgctgcaccacggccgctggctgcgtgccgaagaaatcgacagacggctggcggccaagggcatgcacg                                                                                                                                               <  1:116238‑M1/6‑4 (MQ=255)
       acgtggggcggcgcgaccatccatgtgctgggttatgacttcccactcgacgcaccgccactgctggcggcgattcaagcgctgcaccacggccgctggctgcgtgccgaagaaatcgacagacggctggcggccaagggcaTgcccggc                                                                                                                                             <  2:490101‑M1/8‑1 (MQ=255)
          ggATGCGCCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGc                                                                                                                                         <  2:45314/150‑1 (MQ=255)
           gATGCGCCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCa                                                                                                                                        <  1:1533321/150‑1 (MQ=255)
             tGCGCCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCAcc                                                                                                                                      <  2:2254709/150‑1 (MQ=255)
              gcgcCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAACCGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCa                                                                                                                                     <  1:2344599/150‑1 (MQ=255)
              gcgcCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCa                                                                                                                                     >  1:1276788/1‑150 (MQ=255)
                gcCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGGAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGa                                                                                                                                   >  1:1950511/1‑150 (MQ=255)
                gcCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGa                                                                                                                                   >  2:2274072/1‑150 (MQ=255)
                gcCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGa                                                                                                                                   >  1:956748/1‑150 (MQ=255)
                 ccAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGAt                                                                                                                                  <  2:134761/150‑1 (MQ=255)
                   aGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATAc                                                                                                                                >  2:657239/1‑150 (MQ=255)
                    ggCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCAAG‑TGCTGTGTGGCGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACt                                                                                                                               <  2:685000/150‑1 (MQ=255)
                      cTCACCCAGGTATTCGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGACGAGCAGCAGAAGGGC‑TGGCCGATCCAGCCGGCGCCGAGCAACTTGCGAACCGCTTCACCCCGCTCCTTGACTTGCCCGGCCCGCACCAGATACTCg                                                                                                                             <  1:1151204/150‑1 (MQ=255)
                      cTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGAtgccaa                                                                                                                             <  2:1520942/150‑6 (MQ=255)
                       tCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCGAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCgg                                                                                                                            >  2:1042059/1‑150 (MQ=255)
                       tCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCgg                                                                                                                            <  1:186647/150‑1 (MQ=255)
                       tCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACAGTCCTTGACGTGCCCGGCCCGCACCAGATACTCgg                                                                                                                            >  1:858904/1‑150 (MQ=255)
                       tCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGAAGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCgg                                                                                                                            >  2:30772/1‑150 (MQ=255)
                       tCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TCCTGCTTGACGCCGCCCAGCTTCCCGGCGGCCAGACTCTTGCGAAACGCTGCAACACGGTAATTGACGTGCCCGGCCCGCACGAGATACTCgg                                                                                                                            >  1:893176/1‑150 (MQ=255)
                         aCCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCa                                                                                                                          >  2:575194/1‑150 (MQ=255)
                          cccAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCaa                                                                                                                         >  1:1754627/1‑150 (MQ=255)
                           ccAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCaaa                                                                                                                        >  1:624055/1‑150 (MQ=255)
                                cATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCACACAAGATACTCGGCAAAATGCg                                                                                                                   <  1:1208772/150‑1 (MQ=255)
                                       cTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCCGCAACTTGCGAAACGCTTCACGACGGCCCGGGACTTGCCGGGCCCGCACCAGATACTCGGCAAAATGCGGgcgcgc                                                                                                            <  1:657239/150‑1 (MQ=255)
                                           cTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCgg                                                                                                         >  2:683011/1‑149 (MQ=255)
                                           cTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCgg                                                                                                         <  1:683011/149‑1 (MQ=255)
                                            tCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCgg                                                                                                                  <  1:1487552/139‑1 (MQ=255)
                                            tCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCgg                                                                                                                  >  2:1487552/1‑139 (MQ=255)
                                             cAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGc                                                                                                      <  1:2192147/150‑1 (MQ=255)
                                                 gTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGGCCCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGGGCTGGGGCGTTg                                                                                                  >  1:761489/1‑150 (MQ=255)
                                                 gTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAGTGCGGGCGCGCCGGGGCGTTg                                                                                                  >  1:2168794/1‑150 (MQ=255)
                                                   ggCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGcc                                                                                                <  2:1449966/150‑1 (MQ=255)
                                                    gCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGGCg                                                                                               >  1:2119348/1‑150 (MQ=255)
                                                      aaCGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTc                                                                                                                              >  1:1143278/1‑117 (MQ=255)
                                                      aaCGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTc                                                                                                                              <  2:1143278/117‑1 (MQ=255)
                                                      aaCGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCGGGGGCGTTGCCGCt                                                                                             >  1:2278786/1‑150 (MQ=255)
                                                      aaCGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCt                                                                                             >  2:1982947/1‑150 (MQ=255)
                                                      aaCGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGATCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCt                                                                                             >  2:1061722/1‑150 (MQ=255)
                                                            ttCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCAcc                                                                                       <  1:1982947/150‑1 (MQ=255)
                                                            accgccactgctggcggcgattcaagcgctgcaccacggccgctggctgcgtgccgaagaaatcgacagacggctggcggccaagggcaTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCAc                                                                                        <  1:1497916‑M1/61‑1 (MQ=255)
                                                              cgtcgAGCGTCGGTCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCTGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCa                                                                                     <  2:1222149/150‑1 (MQ=255)
                                                               gtcgGGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCgg                                                                                                         >  1:98275/1‑129 (MQ=255)
                                                               gtcgGGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCgg                                                                                                         <  2:98275/129‑1 (MQ=255)
                                                               gtcgAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCaa                                                                                    >  2:983512/1‑150 (MQ=255)
                                                               gtcgAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCaa                                                                                    >  1:1195773/1‑150 (MQ=255)
                                                                     cGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAACCGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGtg                                                                              >  2:934566/1‑150 (MQ=255)
                                                                     cGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGtg                                                                              <  2:609864/150‑1 (MQ=255)
                                                                       tCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTCCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACCCGGCAAAATGCGGGCGCGCCCGGGCGCTGCCCCTGTCACCCAACTCGtgcc                                                                            >  2:116238/1‑149 (MQ=255)
                                                                                  ctgctTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAg                                                                                                                                    >  1:1412340/1‑84 (MQ=255)
                                                                                  ctgctTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAg                                                                                                                                    <  2:1412340/84‑1 (MQ=255)
                                                                                   tgctTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGgcgcgc                                                                 >  2:1742026/1‑150 (MQ=255)
                                                                                    agcgctgcaccacggccgctggctgcgtgccgaagaaatcgacagacggctggcggccaagggcaTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGgcgcgcg                                                                <  1:1517705‑M1/85‑1 (MQ=255)
                                                                                     ctTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGgcgcgcgc                                                               >  2:1044219/1‑150 (MQ=255)
                                                                                           gTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTc                                                         <  2:1754627/150‑1 (MQ=255)
                                                                                              gCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTGCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGGCGCACGGCGGGCGCGCCTTCGAg                                                      >  2:320818/1‑150 (MQ=255)
                                                                                               cccAGCTTGCCAGAGCACAGACACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGc                                                     >  2:824958/1‑150 (MQ=255)
                                                                                                ccAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCg                                                    >  1:2362989/1‑150 (MQ=255)
                                                                                                ccAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCg                                                    >  2:1599326/1‑150 (MQ=255)
                                                                                                ccAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCg                                                    >  1:1560249/1‑150 (MQ=255)
                                                                                                     ttGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCg                                               >  2:774607/1‑150 (MQ=255)
                                                                                                      ctggctgcgtgccgaagaaatcgacagacggctggcggccaagggcaTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCgg                                              >  2:1497916‑M1/48‑150 (MQ=255)
                                                                                                      ctggctgcgtgccgaagaaatcgacagacggctggcggccaagggcaTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCgg                                              >  2:1517503‑M1/48‑150 (MQ=255)
                                                                                                         cGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCt                                                                                             >  2:888857/1‑100 (MQ=255)
                                                                                                          ggCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCAt                                          >  2:2061968/1‑150 (MQ=255)
                                                                                                             gcCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGcc                                       <  1:575194/150‑1 (MQ=255)
                                                                                                             gcCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTATTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGcc                                       >  1:1119419/1‑150 (MQ=255)
                                                                                                               ccAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCgg                                              <  1:1350612/141‑1 (MQ=255)
                                                                                                                cAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCtt                                    >  2:2312015/1‑150 (MQ=255)
                                                                                                                  cgaagaaatcgacagacggctggcggccaagggcaTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTgg                                  >  2:1517705‑M1/36‑150 (MQ=255)
                                                                                                                   ccACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGgc                                 >  2:657142/1‑150 (MQ=255)
                                                                                                                     aCTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGgccg                               >  1:1638018/1‑150 (MQ=255)
                                                                                                                       ttGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGgccgcc                             >  1:1000431/1‑150 (MQ=255)
                                                                                                                             aaCGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGt                       >  2:2409798/1‑150 (MQ=255)
                                                                                                                                gCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTg                    >  2:2025072/1‑150 (MQ=255)
                                                                                                                                 cTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGgcgc                                                                                                              <  2:1306009/59‑1 (MQ=255)
                                                                                                                                 cTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGt                   <  2:1950511/150‑1 (MQ=255)
                                                                                                                                    caccacGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGa                <  2:1195773/150‑1 (MQ=255)
                                                                                                                                     accacGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGTGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGAt               <  2:858904/150‑1 (MQ=255)
                                                                                                                                      ccacGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGAtt              >  2:917086/1‑150 (MQ=255)
                                                                                                                                       cacGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGtt                                                                                                   >  2:750871/1‑64 (MQ=255)
                                                                                                                                       cacGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGtt                                                                                                   <  1:750871/64‑1 (MQ=255)
                                                                                                                                       cacGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGgc                                                                     <  1:1699044/94‑1 (MQ=255)
                                                                                                                                        acGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTgg                                  >  1:2124729/1‑128 (MQ=255)
                                                                                                                                        acGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTgg                                  <  2:2124729/128‑1 (MQ=255)
                                                                                                                                          ggTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATttctt          <  1:917086/150‑1 (MQ=255)
                                                                                                                                            tCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCg        >  2:734776/1‑150 (MQ=255)
                                                                                                                                               ttGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGtgc                                                                             <  2:810969/78‑1 (MQ=255)
                                                                                                                                               ttGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGtgc                                                                             >  1:810969/1‑78 (MQ=255)
                                                                                                                                               ttGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCa     >  2:1169427/1‑150 (MQ=255)
                                                                                                                                                 gaggTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACg   >  1:2407755/4‑150 (MQ=255)
                                                                                                                                                  aCGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGc  <  2:1264690/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
GTAGTGCATGGGATGCGCCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAG‑TGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGC  >  NC_002947/5115240‑5115534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.