New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5115388 = | 95 (1.070) | 5 (0.060) | 4/230 | NT | 5.7% | coding (446/861 nt) | PP_4500 | TrpH family protein |
? | NC_002947 | 5115494 = | 78 (0.940) | coding (340/861 nt) | PP_4500 | TrpH family protein |
GCCGCTGGCTGCGTGCCGAAGAAATCGACAGACGGCTGGCGGCCAAGGGCATGCCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5115544‑5115388 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgggcaTGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGAC > NC_002947/5115494‑5115642 GCCGCTGGCTGCGTGCCGAAGAAATCGACAGACGGCTGGCGGCCAAGGGCATGCCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGG < 1:1508966/150‑1 CGCTGGCTGCGTGCCGAAGAAATCGACAGACGGCTGGCGGCCAAGGGCATGCCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCC > 1:1169427/1‑150 GCTGGCTGCGTGCCGAAGAAATCGACAGACGGCTGGCGATGAATGGCATGCCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCCG < 1:1833304/150‑1 TGGCTGCGTGCCGAAGAAATCGACAGACTGCTGGCGGCCAAGGGCATGCCTGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCCGGG > 1:307131/1‑150 CGAAGAAATCGACAGACGGCTGGCGGCCAAGGGCATGCCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCCGGG < 1:2297376/139‑1 CGAAGAAATCGACAGACGGCTGGCGGCCAAGGGCATGCCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCCGGG > 2:2297376/1‑139 CCAAGGGCATGCCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCG > 2:1517705/1‑150 CCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAG > 2:1497916/1‑150 CCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAG > 2:1517503/1‑150 CGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCT < 1:1517705/150‑1 GTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGT < 1:1497916/150‑1 GCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGT < 2:490101/150‑1 cgtGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGC < 1:116238/147‑1 GGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAG < 1:1226460/150‑1 GGCATGCCCTTGGCCGCCAGCCGTCTGTAGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAG < 2:194688/150‑1 CATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGA < 1:179081/150‑1 CATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGA < 1:2061968/150‑1 CATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGA < 2:1017649/150‑1 ATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGAC < 1:934566/150‑1 ATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGAAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGAC < 1:1742026/150‑1 GCCGCTGGCTGCGTGCCGAAGAAATCGACAGACGGCTGGCGGCCAAGGGCATGCCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5115544‑5115388 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgggcaTGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGAC > NC_002947/5115494‑5115642 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |