New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 606302898 (1.110)10 (0.120) 10/236 NT 9.2% intergenic (‑85/‑140) rubA/ubiC rubredoxin‑1/chorismate pyruvate‑lyase
?NC_002947 = 6063060 104 (1.220)intergenic (‑117/‑108) rubA/ubiC rubredoxin‑1/chorismate pyruvate‑lyase

Only 100 of 127 total aligned reads displayed.

CAGGCCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCGCTGTCGCGTGGCT  >  NC_002947/6062911‑6063208
                                                                                                                                                      |                                                                                                                                                     
cAGGCCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCa                                                                                                                                                       <  1:769048/150‑1 (MQ=255)
    ccACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgc                                                                                                                                                   <  1:1238386‑M2/150‑5 (MQ=255)
    ccACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgc                                                                                                                                                   >  1:638661‑M2/1‑146 (MQ=255)
     cacaGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcg                                                                                                                                                  <  2:1620105‑M2/150‑6 (MQ=255)
         gACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGATAATGGCCTCTTCGCGGACAGGCCGCTCCTACAT‑TTACCGCGCAGCAGTGGCCGGCTTGCGCGCGCACAGGGCGAgagcggaga                                                                                                                                              <  2:870325‑M2/150‑10 (MQ=255)
              tACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTg                                                                                                                                         >  2:1913257/1‑150 (MQ=255)
               aCATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTgg                                                                                                                                        <  2:1646180/150‑1 (MQ=255)
               aCATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTgg                                                                                                                                        >  1:2241173/1‑150 (MQ=255)
                  ttGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTggggg                                                                                                                                     >  2:1031022/1‑150 (MQ=255)
                    gCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCt                                                                                                                                   >  1:1841184/1‑150 (MQ=255)
                     ccACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCtt                                                                                                                                  <  2:2283327/150‑1 (MQ=255)
                     ccACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGACCGGCTTGCTCGCGCGCAGGGCCAGCGCGCAATGCGTGGGGGCtt                                                                                                                                  >  2:1599240/1‑150 (MQ=255)
                      cACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTTCCCGCGCACAGGGCCAGCGCGCAATGCTTGGGGGCttt                                                                                                                                 >  1:1709858/1‑150 (MQ=255)
                       aCTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGGGGGGGCTTTg                                                                                                                                >  2:495691/1‑150 (MQ=255)
                         tttttCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTa                                                                                                                              <  1:534598/150‑1 (MQ=255)
                         tttttCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTa                                                                                                                              >  2:2373803/1‑150 (MQ=255)
                              catcatGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGc                                                                                                                         <  2:69806/150‑1 (MQ=255)
                              catcaGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGc                                                                                                                         <  2:1817009/150‑1 (MQ=255)
                                   ggTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCt                                                                                                                      <  1:40287/148‑1 (MQ=255)
                                   ggTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCt                                                                                                                      >  2:40287/1‑148 (MQ=255)
                                       tATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTgccgcc                                                                                                                >  2:1171807/1‑150 (MQ=255)
                                         tttCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGGGGGCGTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAg                                                                                                              <  2:802996/150‑1 (MQ=255)
                                         tttCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTg                                                                                                                                >  2:1890344/1‑132 (MQ=255)
                                         tttCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTg                                                                                                                                <  1:1890344/132‑1 (MQ=255)
                                         tttCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAg                                                                                                              <  1:1031022/150‑1 (MQ=255)
                                            ccTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGTCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTAt                                                                                                           <  2:1610864/150‑1 (MQ=255)
                                            ccTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCCCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTAt                                                                                                           <  1:2091125/150‑1 (MQ=255)
                                              tCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTggg                                                                                                                                       >  1:693556/1‑120 (MQ=255)
                                              tCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTa                                                                                                                              <  2:2133527/129‑1 (MQ=255)
                                              tCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTa                                                                                                                              >  1:2133527/1‑129 (MQ=255)
                                              tCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGc                                                                                                         >  2:29220/1‑150 (MQ=255)
                                                       gCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTg                                                                                                >  1:1758201/1‑150 (MQ=255)
                                                       gCTGGGGCTTGTGCTGCTGCTGATGGCCCCCTCGCGGGCCGCCCCCTCGTACAC‑TGACCGCGCAGGTCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGGGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTg                                                                                                <  1:870325/150‑1 (MQ=255)
                                                       gCTGGGGCTTGGGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTg                                                                                                >  2:599829/1‑150 (MQ=255)
                                                         tGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTggg                                                                                              >  2:2222939/1‑150 (MQ=255)
                                                         tGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTggg                                                                                              <  2:1924032/150‑1 (MQ=255)
                                                            ggCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCa                                                                                           >  1:883170/1‑150 (MQ=255)
                                                            ggCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCa                                                                                           <  1:1267656/150‑1 (MQ=255)
                                                             gCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGTGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCaa                                                                                          >  2:1737425/1‑150 (MQ=255)
                                                             gCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCaa                                                                                          <  1:1580406/150‑1 (MQ=255)
                                                                  tgtTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATg                                                                                    >  2:1743721/1‑150 (MQ=255)
                                                                   gtTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGc                                                                                                                         <  2:776820/113‑1 (MQ=255)
                                                                   gtTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGc                                                                                                                         >  1:776820/1‑113 (MQ=255)
                                                                    ttGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCgg                                                                                                                          >  2:1154592/1‑111 (MQ=255)
                                                                    ttGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCgg                                                                                                                          <  1:1154592/111‑1 (MQ=255)
                                                                        tgctgATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGc                                                                              >  1:1513711/1‑150 (MQ=255)
                                                                             aTGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTcgcc                                                                         <  1:2388686/150‑1 (MQ=255)
                                                                             aTGGCCTCTTCGCGGGCAAGCCGCT‑CGCCATTTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTcgcc                                                                         >  1:1269164/1‑150 (MQ=255)
                                                                                gCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCgccgcc                                                                      >  2:1306943/1‑150 (MQ=255)
                                                                                 ccTCTTGGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCct                                                                     >  2:1843121/1‑150 (MQ=255)
                                                                                  ctctTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCctc                                                                    >  2:2403255/1‑150 (MQ=255)
                                                                                  ctctTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCctc                                                                    <  1:1306943/150‑1 (MQ=255)
                                                                                         cgGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCt                                                             <  2:883170/150‑1 (MQ=255)
                                                                                           ggCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCa                                                                                                               >  1:1401475/1‑99 (MQ=255)
                                                                                           ggCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCa                                                                                                               <  2:1401475/99‑1 (MQ=255)
                                                                                              aaGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAAc                                                        >  2:1401206/1‑150 (MQ=255)
                                                                                                gCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctgatgaaaaagtg                                                       <  1:2063130‑M2/150‑97 (MQ=255)
                                                                                                gCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCttt                                                                                                                                 <  2:185143/76‑1 (MQ=255)
                                                                                                gCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCttt                                                                                                                                 >  1:185143/1‑76 (MQ=255)
                                                                                                 ccGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACaaa                                                     >  2:177203/1‑150 (MQ=255)
                                                                                                   gCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCCGGc                                                              <  1:159444/139‑1 (MQ=255)
                                                                                                    cTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCCGTGC‑AAGCTCGCCGCCTCTCTGGCTGTAACAAAGCa                                                  <  1:1171807/150‑1 (MQ=255)
                                                                                                       gatctg‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATAc                                               <  2:1855442/145‑1 (MQ=255)
                                                                                                       cTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATAc                                               <  1:1126809/150‑1 (MQ=255)
                                                                                                       cTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATAc                                               <  1:1599240/150‑1 (MQ=255)
                                                                                                        tACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATAcc                                              >  1:2234057/1‑150 (MQ=255)
                                                                                                         aCAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTg                                                                >  2:1517679/1‑131 (MQ=255)
                                                                                                          cAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctgatgaaaaagtgg                                                      <  2:4581‑M2/141‑98 (MQ=255)
                                                                                                          cAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctgatgaaaaagtgg                                                      >  1:4581‑M2/1‑44 (MQ=255)
                                                                                                           aG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTggg                                                                                              >  1:1257371/1‑100 (MQ=255)
                                                                                                           aG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTggg                                                                                              <  2:1257371/100‑1 (MQ=255)
                                                                                                           aG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACaaa                                                     >  1:1699332/1‑140 (MQ=255)
                                                                                                            g‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACg                                          <  1:837392/150‑1 (MQ=255)
                                                                                                              tGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACgt                                         <  1:1843121/150‑1 (MQ=255)
                                                                                                              tGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACgt                                         <  1:754908/150‑1 (MQ=255)
                                                                                                              tGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGCTCAGTGTGGCGTTGGTGGGGGCATTCGAGCGGCCCGGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCACTCTGGCTGTAACAAAGCATAccagatc                                         >  1:1855442/1‑145 (MQ=255)
                                                                                                                aCCGGGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaacc                                                                                 >  1:1594001‑M2/1‑39 (MQ=255)
                                                                                                                aCCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaacc                                                                                 <  2:1594001‑M2/109‑71 (MQ=255)
                                                                                                                aCCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACgtgt                                       <  1:1401206/150‑1 (MQ=255)
                                                                                                                  cgcgCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctga                                                                 <  1:888615‑M2/123‑87 (MQ=255)
                                                                                                                  cgcgCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctga                                                                 >  2:888615‑M2/1‑37 (MQ=255)
                                                                                                                  cgcgCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCg                                     <  1:1743721/150‑1 (MQ=255)
                                                                                                                         gCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTGGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAAt                              <  2:936854/150‑1 (MQ=255)
                                                                                                                             ggCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATcccc                          <  2:1758201/150‑1 (MQ=255)
                                                                                                                              gCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCGTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTcgcc                                                                         >  2:1561647/1‑102 (MQ=255)
                                                                                                                              gCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTcgcc                                                                         <  1:1561647/102‑1 (MQ=255)
                                                                                                                                  gCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAag                     >  1:2198415/1‑150 (MQ=255)
                                                                                                                                    ttGCCCGCTCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAagca                   >  1:167704/1‑150 (MQ=255)
                                                                                                                                    ttGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctgatgaaaaagtggcaatgtattgtctgtggcctgatctacgacgaag                    <  1:2256104‑M2/150‑132 (MQ=255)
                                                                                                                                        ccGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCg               >  1:1604077/1‑150 (MQ=255)
                                                                                                                                          gcgcACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCGCt             <  2:1179887/150‑1 (MQ=255)
                                                                                                                                            gcACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGTCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTCGCTGTAACAAAGCATACCGACATATCGTACGAATCCCCGCAAGCAGCAGCTGt           >  2:343390/1‑150 (MQ=255)
                                                                                                                                              acaGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCGCTGTcg         >  1:31672/1‑150 (MQ=255)
                                                                                                                                                 gggCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCGCTGTCGCGt      <  2:1815657/150‑1 (MQ=255)
                                                                                                                                                  ggCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCGCTGTCGCGTg     <  1:1620105/150‑1 (MQ=255)
                                                                                                                                                    ccAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCGCTGTCGCGTGGc   <  2:31672/150‑1 (MQ=255)
                                                                                                                                                    ccAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCGCTGTCGCGTGGc   <  2:1709858/150‑1 (MQ=255)
                                                                                                                                                     cAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCGCTGTCGCGTGGCt  >  1:1523980/1‑150 (MQ=255)
                                                                                                                                                     cAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCGCTGTCGCGTGGCt  >  2:171230/1‑150 (MQ=255)
                                                                                                                                                     cAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCGCTGTCGCGTGGCt  >  1:1793263/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
CAGGCCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAG‑TGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCGCTGTCGCGTGGCT  >  NC_002947/6062911‑6063208

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.