| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6063028 | 98 (1.110) | 10 (0.120) | 10/236 | NT | 9.2% | intergenic (‑85/‑140) | rubA/ubiC | rubredoxin‑1/chorismate pyruvate‑lyase |
| ? | NC_002947 | = 6063060 | 104 (1.220) | intergenic (‑117/‑108) | rubA/ubiC | rubredoxin‑1/chorismate pyruvate‑lyase | |||||
CTTCGTCGTAGATCAGGCCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6062898‑6063028‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcTGGCCCTGTGCGCGGGCAAGCCCGCCAGGCCTGCGCGGTCACTGTAGGAGCGGCTTGCCCGCGAAGAGGCCATCAGCAGCAACACAAGCCCCAGCCTGAACCGAGGAAATAGACCTGATGAAAAAGTGGCAATGTATTGTCTGTGG < NC_002947/6063060‑6062915 CTTCGTCGTAGATCAGGCCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCTGGCCCTGTGCGCGGGCAA < 1:2256104/150‑1 AGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACC > 1:591469/1‑106 AGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACC < 2:591469/106‑1 CCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCTGGCCCTGTGCGCGGGCAAGCCCGCCAGGCCTGCGCGGTCACTG > 1:4581/1‑141 CCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCTGGCCCTGTGCGCGGGCAAGCCCGCCAGGCCTGCGCGGTCACTG < 2:4581/141‑1 CACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCTGGCCCTGTGCGCGGGCAAGCCCGCCAGGCCTGCGCGGTCACTGTAGGAGCGGC < 1:2063130/150‑1 CACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCTGGCCCTGTGCGCGGGCAAGCCCGCCAGGCCTGCGCGGTCA > 1:1863906/1‑137 CACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCTGGCCCTGTGCGCGGGCAAGCCCGCCAGGCCTGCGCGGTCA < 2:1863906/137‑1 TCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCTGGCCCTGTGCGCGGGCAAGCCCGCCAGGCCTGCGCG < 1:888615/123‑1 TCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCTGGCCCTGTGCGCGGGCAAGCCCGCCAGGCCTGCGCG > 2:888615/1‑123 GGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCTGGCCCTGTGCGCGGGCAAGCCCGCCAGGCCTGCGCGGT < 2:1594001/109‑1 GGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCTGGCCCTGTGCGCGGGCAAGCCCGCCAGGCCTGCCCGGT > 1:1594001/1‑109 tctCCGCTCTCGCCCTGTGCGCGCGCAAGCCGGCCACTGCTGCGCGGTAAATGTAGGAGCGGCCTGTCCGCGAAGAGGCCATTATCAGCAACACAAGCCCCAGCCTGAACCGAGGAAATAGACCTGATGAAAAAGTGGCAATGTATTGTC < 2:870325/147‑1 CGCGCTGGCCCTGTGCGCGGGCAAGCCCGCCAGGCCTGCGCGGTCACTGTAGGAGCGGCTTGCCCGCGAAGAGGCCATCAGCAGCAACACAAGCCCCAGCCTGAACCGAGGAAATAGACCTGATGAAAAAGTGGCAATGTATTGTCTGTG < 2:1620105/150‑1 GCGCTGGCCCTGTGCGCGGGCAAGCCCGCCAGGCCTGCGCGGTCACTGTAGGAGCGGCTTGCCCGCGAAGAGGCCATCAGCAGCAACACAAGCCCCAGCCTGAACCGAGGAAATAGACCTGATGAAAAAGTGGCAATGTATTGTCTGTGG < 1:1238386/150‑1 GCGCTGGCCCTGTGCGCGGGCAAGCCCGCCAGGCCTGCGCGGTCACTGTAGGAGCGGCTTGCCCGCGAAGAGGCCATCAGCAGCAACACAAGCCCCAGCCTGAACCGAGGAAATAGACCTGATGAAAAAGTGGCAATGTATTGTCTGTGG > 1:638661/1‑150 CTTCGTCGTAGATCAGGCCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6062898‑6063028‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcTGGCCCTGTGCGCGGGCAAGCCCGCCAGGCCTGCGCGGTCACTGTAGGAGCGGCTTGCCCGCGAAGAGGCCATCAGCAGCAACACAAGCCCCAGCCTGAACCGAGGAAATAGACCTGATGAAAAAGTGGCAATGTATTGTCTGTGG < NC_002947/6063060‑6062915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |