BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6063028	98 (1.110)	10 (0.120)	10/236	NT	9.2%	intergenic (‑85/‑140)	rubA/ubiC	rubredoxin‑1/chorismate pyruvate‑lyase
*	?	NC_002947	= 6063060	104 (1.220)	10 (0.120)	10/236	NT	9.2%	intergenic (‑117/‑108)	rubA/ubiC	rubredoxin‑1/chorismate pyruvate‑lyase

Only 100 of 128 total aligned reads displayed.

CCTTCGGCTTCGTCGTAGATCAGGCCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCG  >  NC_002947/6062891‑6063173

ccTTCGGCTTCGTCGTAGATCAGGCCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCggg                                                                                                                                        <  1:1505100/150‑1 (MQ=255)

   tCGGCTTCGTCGTAGATCAGGCCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCtt                                                                                                                                     <  1:767155/150‑1 (MQ=255)

    cGGCTTCGTCGTGGATCAGGCCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTg                                                                                                                                    >  2:754396/1‑150 (MQ=255)

       cTTCGTCGTAGATCAGGCCACAGACAATACATTGCCACTTTTTTATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGccc                                                                                                                                 <  1:2068319/150‑1 (MQ=255)

       cTTCGTCGTAGATCAGGCCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCtggccctgtgcgcgggcaa                                                                                                                                 <  1:2256104‑M1/150‑20 (MQ=255)

         tcgtcgTAGATCAGGCCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCcgc                                                                                                                               <  1:1436447/150‑1 (MQ=255)

                    cAGGCCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCa                                                                                                                    <  1:769048/150‑1 (MQ=255)

                        ccACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgc                                                                                                                >  1:638661‑M2/1‑146 (MQ=255)

                        ccACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgc                                                                                                                <  1:1238386‑M2/150‑5 (MQ=255)

                         cacaGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcg                                                                                                               <  2:1620105‑M2/150‑6 (MQ=255)

                            aGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCACGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCaa                                                                                                            <  2:1745578/150‑1 (MQ=255)

                             gACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGATAATGGCCTCTTCGCGGACAGGCCGCTCCTACATTTACCGCGCAGCAGTGGCCGGCTTGCGCGCGCACAGGGCGAgagcggaga                                                                                                           <  2:870325‑M2/150‑10 (MQ=255)

                                 aTACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGCCCGCGCAGCCCTGGCGGGCTTGCCCGCGCACAGGACCAGCGCGCAATGCGt                                                                                                       <  2:399034/150‑1 (MQ=255)

                                  tACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTg                                                                                                      >  2:1913257/1‑150 (MQ=255)

                                   aCATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTgg                                                                                                     <  1:1587981/150‑1 (MQ=255)

                                   aCATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTgg                                                                                                     <  2:1646180/150‑1 (MQ=255)

                                      ttGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTggggg                                                                                                  >  2:1031022/1‑150 (MQ=255)

                                         ccACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCtggccctgtgcgcgggcaagcccgccaggcctgcgcggtcactg                                                                                                        >  1:4581‑M1/1‑97 (MQ=255)

                                         ccACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCtt                                                                                               <  2:2283327/150‑1 (MQ=255)

                                         ccACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGACCGGCTTGCTCGCGCGCAGGGCCAGCGCGCAATGCGTGGGGGCtt                                                                                               >  2:1599240/1‑150 (MQ=255)

                                          cACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCtggccctgtgcgcgggcaagcccgccaggcctgcgcggtcactgtaggagcggc                                                                                              <  1:2063130‑M1/150‑55 (MQ=255)

                                          cACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCtggccctgtgcgcgggcaagcccgccaggcctgcgcggtca                                                                                                           >  1:1863906‑M1/1‑96 (MQ=255)

                                          cACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTTCCCGCGCACAGGGCCAGCGCGCAATGCTTGGGGGCttt                                                                                              >  1:1709858/1‑150 (MQ=255)

                                          cACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCttt                                                                                              <  1:852096/150‑1 (MQ=255)

                                           aCTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGGGGGGGCTTTg                                                                                             >  2:495691/1‑150 (MQ=255)

                                             tttttCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTa                                                                                           <  1:534598/150‑1 (MQ=255)

                                                  catcatGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGc                                                                                      <  2:69806/150‑1 (MQ=255)

                                                    tcaGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCtggccctgtgcgcgggcaagcccgccaggcctgcgcg                                                                                                               >  2:888615‑M1/1‑86 (MQ=255)

                                                    tcaGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGccc                                                                                    >  1:1610864/1‑150 (MQ=255)

                                                       ggTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCt                                                                                   >  2:40287/1‑148 (MQ=255)

                                                       ggTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCt                                                                                   <  1:40287/148‑1 (MQ=255)

                                                             tttCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGGGGGCGTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAg                                                                           <  2:802996/150‑1 (MQ=255)

                                                             tttCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTg                                                                                             >  2:1890344/1‑132 (MQ=255)

                                                             tttCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTg                                                                                             <  1:1890344/132‑1 (MQ=255)

                                                             tttCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAg                                                                           <  1:1031022/150‑1 (MQ=255)

                                                                  tCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTggg                                                                                                    >  1:693556/1‑120 (MQ=255)

                                                                  tCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTa                                                                                           >  1:2133527/1‑129 (MQ=255)

                                                                  tCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGc                                                                      >  2:29220/1‑150 (MQ=255)

                                                                  tCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGc                                                                      >  1:436062/1‑150 (MQ=255)

                                                                    ggTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCtggccctgtgcgcgggcaagcccgccaggcctgcccggt                                                                                                             >  1:1594001‑M1/1‑70 (MQ=255)

                                                                           gCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTg                                                             >  1:1758201/1‑150 (MQ=255)

                                                                           gCTGGGGCTTGTGCTGCTGCTGATGGCCCCCTCGCGGGCCGCCCCCTCGTACACTGACCGCGCAGGTCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGGGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTg                                                             <  1:870325/150‑1 (MQ=255)

                                                                           gCTGGGGCTTGGGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTg                                                             >  2:599829/1‑150 (MQ=255)

                                                                            cTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTgg                                                            <  2:1238386/150‑1 (MQ=255)

                                                                             tGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTggg                                                           >  2:2222939/1‑150 (MQ=255)

                                                                             tGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTggg                                                           <  2:1924032/150‑1 (MQ=255)

                                                                                ggCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCa                                                        >  1:883170/1‑150 (MQ=255)

                                                                                ggCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCa                                                        <  1:1267656/150‑1 (MQ=255)

                                                                                 gCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCa                                                                                                                                                   >  1:1307792/1‑58 (MQ=255)

                                                                                  cTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAt                                                      <  2:1841184/150‑1 (MQ=255)

                                                                                      tgtTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATg                                                 <  1:217209/150‑1 (MQ=255)

                                                                                      tgtTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATg                                                 >  2:1743721/1‑150 (MQ=255)

                                                                                      tgtTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCCTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATg                                                 >  2:217209/1‑150 (MQ=255)

                                                                                       gtTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGc                                                                                      <  2:776820/113‑1 (MQ=255)

                                                                                        ttGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCgg                                                                                       <  1:1154592/111‑1 (MQ=255)

                                                                                        ttGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCgg                                                                                       >  2:1154592/1‑111 (MQ=255)

                                                                                            tgctgATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGc                                           >  1:1513711/1‑150 (MQ=255)

                                                                                                 aTGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTcgcc                                      <  1:2388686/150‑1 (MQ=255)

                                                                                                    gCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCgccgcc                                   >  2:1306943/1‑150 (MQ=255)

                                                                                                     ccTCTTGGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCct                                  >  2:1843121/1‑150 (MQ=255)

                                                                                                      ctctTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCctc                                 <  1:1306943/150‑1 (MQ=255)

                                                                                                      ctctTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCctc                                 >  2:2403255/1‑150 (MQ=255)

                                                                                                           cgcgGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTgg                            <  2:1513711/150‑1 (MQ=255)

                                                                                                           cgcgGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTgg                            <  1:2373803/150‑1 (MQ=255)

                                                                                                             cgGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCt                          <  2:883170/150‑1 (MQ=255)

                                                                                                               ggCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCa                                                                            <  2:1401475/99‑1 (MQ=255)

                                                                                                                  aaGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAAc                     >  2:1401206/1‑150 (MQ=255)

                                                                                                                    gCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctgatgaaaaagtg                    <  1:2063130‑M2/150‑97 (MQ=255)

                                                                                                                    gCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCttt                                                                                              <  2:185143/76‑1 (MQ=255)

                                                                                                                    gCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCttt                                                                                              >  1:185143/1‑76 (MQ=255)

                                                                                                                     ccGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACaaa                  >  2:177203/1‑150 (MQ=255)

                                                                                                                       gCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGc                >  1:1815657/1‑150 (MQ=255)

                                                                                                                       gCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCCGGc                           >  2:159444/1‑139 (MQ=255)

                                                                                                                        cTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCCGTGC‑AAGCTCGCCGCCTCTCTGGCTGTAACAAAGCa               <  1:1171807/150‑1 (MQ=255)

                                                                                                                           gatctgTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATAc            <  2:1855442/145‑1 (MQ=255)

                                                                                                                           cTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATAc            <  1:1126809/150‑1 (MQ=255)

                                                                                                                           cTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATAc            <  1:1599240/150‑1 (MQ=255)

                                                                                                                            tACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATAcc           >  1:2234057/1‑150 (MQ=255)

                                                                                                                             aCAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTg                             <  1:1517679/131‑1 (MQ=255)

                                                                                                                             aCAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTg                             >  2:1517679/1‑131 (MQ=255)

                                                                                                                              cAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctgatgaaaaagtgg                   <  2:4581‑M2/141‑98 (MQ=255)

                                                                                                                              cAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctgatgaaaaagtgg                   >  1:4581‑M2/1‑44 (MQ=255)

                                                                                                                               aGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTggg                                                           <  2:1257371/100‑1 (MQ=255)

                                                                                                                               aGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTggg                                                           >  1:1257371/1‑100 (MQ=255)

                                                                                                                               aGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACaaa                  <  2:1699332/140‑1 (MQ=255)

                                                                                                                               aGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACaaa                  >  1:1699332/1‑140 (MQ=255)

                                                                                                                               aGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGAc        >  2:1024737/1‑150 (MQ=255)

                                                                                                                                gTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACg       <  1:837392/150‑1 (MQ=255)

                                                                                                                                 tGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctgatgaaaaagtg                    <  2:1863906‑M2/137‑97 (MQ=255)

                                                                                                                                 tGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACgt      <  1:754908/150‑1 (MQ=255)

                                                                                                                                 tGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACgt      <  1:1843121/150‑1 (MQ=255)

                                                                                                                                 tGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGCTCAGTGTGGCGTTGGTGGGGGCATTCGAGCGGCCCGGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCACTCTGGCTGTAACAAAGCATAccagatc      >  1:1855442/1‑145 (MQ=255)

                                                                                                                                   aCCGGGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaacc                                              >  1:1594001‑M2/1‑39 (MQ=255)

                                                                                                                                   aCCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaacc                                              <  2:1594001‑M2/109‑71 (MQ=255)

                                                                                                                                   aCCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACgtgt    <  1:1401206/150‑1 (MQ=255)

                                                                                                                                     cgcgCtggccctgtgcgcgggcaagcccgccaggcctgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctgatgaaaaagtggcaatgtattgtctgtg   <  2:1620105‑M1/150‑146 (MQ=255)

                                                                                                                                     cgcgCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctga                              <  1:888615‑M2/123‑87 (MQ=255)

                                                                                                                                     cgcgCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCg  <  1:1743721/150‑1 (MQ=255)

                                                                                                                                      gcgctggccctgtgcgcgggcaagcccgccaggcctgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctgatgaaaaagtggcaatgtattgtctgtgg  >  1:638661‑M1/1‑4 (MQ=255)

                                                                                                                                      gcgctggccctgtgcgcgggcaagcccgccaggcctgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctgatgaaaaagtggcaatgtattgtctgtgg  <  1:1238386‑M1/150‑147 (MQ=255)

CCTTCGGCTTCGTCGTAGATCAGGCCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAAT‑CATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCG  >  NC_002947/6062891‑6063173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.