| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2726286 = | 83 (0.940) | 4 (0.050) | 4/234 | NT | 5.0% | coding (413/1083 nt) | PP_2387 | hypothetical protein |
| ? | NC_002947 | 2726323 = | 72 (0.860) | coding (376/1083 nt) | PP_2387 | hypothetical protein | |||||
TGAGCCTGGCCGGCTGCGGGCTGAACGCCACCCAGGAATTGATGATGTTCCTGACCCACCAGCACCGCCTTGGCCAACTCGGCCATGTGGTGGTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2726382‑2726286‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgctGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGTCGGAGCTGGCGCCGATGCCCAGGGCTGTGGAGCCGC > NC_002947/2726323‑2726469 TGAGCCTGGCCGGCTGCGGGCTGAACGCCACCCAGGAATTGATGATGTTCCTGACCCACCAGCACCGCCTTGGCCAACTCGGCCATGTGGTGGTac > 1:1860021/1‑94TGAGCCTGGCCGGCTGCGGGCTGAACGCCACCCAGGAATTGATGATGTTCCTGACCCACCAGCACCGCCTTGGCCAACTCGGCCATGTGGTGGTac < 2:1860021/96‑3 CACCAGCACCGCCTTGGCCAACTCGGCCATGTGGTGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTC > 1:135402/1‑150 CCAGCACCGCCTTGGCCAACTCGGCCATGTGGTGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGT > 2:1462217/1‑150 CAGCACCGCCTTGGCCAACTCGGCCATGTGGTGGTGCTGGTGTGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGA < 2:1400052/116‑1 CAGCACCGCCTTGGCCAACTCGGCCATGTGGTGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGA > 1:1400052/1‑116 GGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGTCGGAGCTGGCGCCGATGCCCAGGGCTGTGGAGC > 1:1427143/1‑150 TGCTGGGGGGTCAGGAACATCATCAATTCGTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGTCGGAGCTGGCGCCGATGCCCAGGGCTGTGGAGCCG > 1:1447080/1‑150 GCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTTGTCGGAGCTGGCGCCGATGCCCAGGGCTGTGGAGCCGC < 2:1395701/150‑1 TGAGCCTGGCCGGCTGCGGGCTGAACGCCACCCAGGAATTGATGATGTTCCTGACCCACCAGCACCGCCTTGGCCAACTCGGCCATGTGGTGGTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2726382‑2726286‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgctGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGTCGGAGCTGGCGCCGATGCCCAGGGCTGTGGAGCCGC > NC_002947/2726323‑2726469 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |