New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1036467	73 (0.820)	5 (0.060)	5/240	NT	6.4%	coding (169/591 nt)	PP_0895	hypothetical protein
	?	NC_002947	= 1036482	76 (0.880)					coding (184/591 nt)	PP_0895	hypothetical protein

CATCGATGACCTCGCTCGCCTGCGCCTTACTGTGTTCCGCGAGTTCCCCTACCTTTACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1036340‑1036467 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCGTCGTCCAG‑CGCCAGCACAACCAGGCTGCGCCCGGAGCGGGCATAGTTGGCCAGGTAGTCGGCCTCGTACTCCGGGGTGCCGTCGTAAAGGTAGGGGAACTCGCGGAACACAGTAA  <  NC_002947/1036482‑1036366                                                                                                                                                                                                                                                        CATCGATGACCTCGCTCGCCTGCGCCTTACTGTGTTCCGCGAGTTCCCCTACCTTTACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCCGTCGTCCAG‑CGCCAGCACAAC                                                                                                 <  2:382232/150‑1                TCGCCTGCGCCTTACTGTGTTCCGCGAGTTCCCCTACCTTTACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGC                                                                                                                        <  1:1952865/113‑1                TCGCCTGCGCCTTACTGTGTTCCGCGAGTTCCCCTACCTTTACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGC                                                                                                                        >  2:1952865/1‑113                                                                                                       CCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGA‑CGACGGCACAACCAGGCTGCGCCCGGAGCGGGCATAGTTGGCCAGGTAGTCGGCCTCGTACTCCGGGGTGCCGTCGTAAAGGTAGGGGAACTCGCGGAACACAGTAA  <  2:2123208/143‑1                                                                                                       CCGCTCCGGGCGCAGCCTGGTTGTGCTGGCG‑CTGGACGACGGCACAACCAGGCTGCGCCCGGAGCGGGCATAGTTGGCCAGGTAGTCGGCCTCGTACTCCGGGGTGCCGTCGTAAAGGTAGGGGAACTCGCGGAACACAGTAA  >  1:2123208/1‑143                                                                                                             CGGGCGCAGCCTGGTTGTGCCGTCGTCCAG‑CGCCAGCA                                                                                                     >  1:996511/1‑38                                                                                                             CGGGCGCAGCCTGGTTGTGCCGTCGTCCAG‑CGCCAGCA                                                                                                     <  2:996511/38‑1                                                                                                                                                                                                                                                        CATCGATGACCTCGCTCGCCTGCGCCTTACTGTGTTCCGCGAGTTCCCCTACCTTTACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1036340‑1036467 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCGTCGTCCAG‑CGCCAGCACAACCAGGCTGCGCCCGGAGCGGGCATAGTTGGCCAGGTAGTCGGCCTCGTACTCCGGGGTGCCGTCGTAAAGGTAGGGGAACTCGCGGAACACAGTAA  <  NC_002947/1036482‑1036366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.