| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1771941 | 99 (1.120) | 8 (0.090) | 8/238 | NT | 7.6% | coding (2647/3000 nt) | PP_1579 | hypothetical protein |
| ? | NC_002947 | = 1771957 | 98 (1.140) | coding (2663/3000 nt) | PP_1579 | hypothetical protein | |||||
GATCGGCATGCGCGTTTTGCGTAAGCATCAGTCGCAGCGCTGGTCGTACTCGGGCACCACCGACCTGGAGGTGCTGTGCTATGAGCGGTTTGATCGCATGGCCCTGTCCGACGACATACCTGGCACCAGCCAGTCGGCACTCATCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1771793‑1771941‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgCCGACCACATTGGCGCCGACGATGAGTGCCGACTGGCTGGTGCCAGGTATGTCGTCGGACAGGGCCATGCGATCAAACCGCTCATAGCACAGCACCTCCAGGTCGGTGGTGCCCGAGTACGACCAGCGCTGCGACTGATGCTTACGC < NC_002947/1771957‑1771811 GATCGGCATGCGCGTTTTGCGTAAGCATCAGTCGCAGCGCTGGTCGTACTCGGGCACCACCGACCTGGAGGTGCTGTGCTATGAGCGGTTTGATCGCATGGCCCTGTCCGACGACATACCTGGCACCAGCCAGTCGGCACTCATCGTC > 1:1643364/1‑148GATCGGCATGCGCGTTTTGCGTAAGCATCAGTCGCAGCGCTGGTCGTACTCGGGCACCACCGACCTGGAGGTGCTGTGCTATGAGCGGTTTGATCGCATGGCCCTGTCCGACGACATACCTGGCACCAGCCAGTCGGCACTCATCGTC < 2:1643364/148‑1 TAAGCATCAGTCGCAGCGCTGGTCGTACCCTGTCACCACCGACCTGGAGGTGCTGTGCTATGAGCGGTTTGATCGCATGGCCCTGTCCGACGACATACCTGGCACCAGCCAGTCGGCACTCATCGTCGCCGACCACATTGGCGCCGACGA < 1:1811971/150‑1 AAGCATCAGTCGCAGCGCTGGTCGTACTCGGGCACCACCGACCTGGAGGTGCTGTGCTATGAGCGGTTTGATCGCATGGCCCTGTCCGACGACATACCTGGCACCAGCCAGTCGGCACTCATCGTCGCCGACCACATTGGCGCCGACGAT < 1:2160437/150‑1 CCTGGAGGTGCTGTGCTATGAGCGGTTTGATCGCATGGCCCTGTCCGACGACATACCTGGCACCAGCCAGTCGGCACTCATCGTCGCCGACCACATTGGCGCCGACG > 1:2289054/1‑107 CCTGGAGGTGCTGTGCTATGAGCGGTTTGATCGCATGGCCCTGTCCGACGACATACCTGGCACCAGCCAGTCGGCACTCATCGTCGCCGACCACATTGGCGCCGACG < 2:2289054/107‑1 CCCTGTCCGACGACATACCTGGCACCAGCCAGTCGGCACTCATCGTCGCCGACCACATTGGCGCCGACGATGAGT < 1:838173/75‑1 CCCTGTCCGACGACATACCTGGCACCAGCCAGTCGGCACTCATCGTCGCCGACCACATTGGCGCCGACGATGAGT > 2:838173/1‑75 GACGACATACCTGGCACCAGCCAGTCGGCACTCATCGTCGCCGACCACATTGGCGCCGA < 1:1863990/59‑1 GACGACATACCTGGCACCAGCCAGTCGGCACTCATCGTCGCCGACCACATTGGCGCCGA > 2:1863990/1‑59 TCGCCGACCACATTGGCGCCGACGATGAGTGCCGACTGGCTGGTGCCAGGTATGTCGTCGGACAGGGCCATGCGATCAAACCGCTCATAGCACAGCACCTCCAGGTCGGTGGTGCCCGAGTACGACCAGCGCTGCGACTGATGCTTACGa < 2:1108967/150‑2 GATCGGCATGCGCGTTTTGCGTAAGCATCAGTCGCAGCGCTGGTCGTACTCGGGCACCACCGACCTGGAGGTGCTGTGCTATGAGCGGTTTGATCGCATGGCCCTGTCCGACGACATACCTGGCACCAGCCAGTCGGCACTCATCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1771793‑1771941‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgCCGACCACATTGGCGCCGACGATGAGTGCCGACTGGCTGGTGCCAGGTATGTCGTCGGACAGGGCCATGCGATCAAACCGCTCATAGCACAGCACCTCCAGGTCGGTGGTGCCCGAGTACGACCAGCGCTGCGACTGATGCTTACGC < NC_002947/1771957‑1771811 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |