| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5277534 | 113 (1.280) | 8 (0.090) | 7/242 | NT | 6.9% | coding (447/1221 nt) | PP_4652 | membrane protein |
| ? | NC_002947 | = 5277572 | 106 (1.220) | coding (485/1221 nt) | PP_4652 | membrane protein | |||||
GCCACCGACAACGTCACCCGCGAACTGATCTTTGCTCTGGCCTTCCTGCTCGGCGCCAGCCGCTCATTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5277385‑5277534‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGAGGCCGACGCCGCCACTGCCCGCGGGAACAGCCCGGCCGGTACCACATTGGGCAACAGCGCCTGGGTTGCCGGCATTTCGAATGAGCGGCTGGCGCCGAGCAGGAAGGC < NC_002947/5277572‑5277424 GCCACCGACAACGTCACCCGCGAACTGATCTTTGCTCTGGCCTTCCTGCTCGGCGCCAGCCGCTCATTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCG < 1:2092279/150‑1GCCACCGACAACGTCACCCGCGAACTGATCTTTGCTCTGGCCTTCCTGCTCGGCGCCAGCCGCTCATTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCG < 2:2165279/150‑1 TCTGGCCTTCCTGCTCGGCGCCAGCCGCTCATTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTCGCGGCGTCCGCCGCGCCCACC‑‑GCCGGCGCCACGATGCTCGCCCACTGGGT > 2:1353219/1‑150 GCCTTCCTGCTCGGCGCCAGCCGCTCATTCGAAATGCCGGCAACCCACGCGTCGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCGCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCC < 1:1353219/150‑1 TTCCTGCTCGGCGCCAGCCGCTCATTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCGCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGAG < 2:735815/150‑1 TTCCTGCACGGCGCCAGCCGCTCATTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAAGGTGGTACAGCGCCTTCGGGTCCCGCGGGCAGTGGCGGCGTCGGCCTCGCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGAG < 2:195941/150‑1 TTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCGGCCACCCAGTCGGCGCCACGATGGTCGCCGACTGGG < 1:480094/120‑1 TTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCGGCCACCCAGTCGGCGCCACGATGGTCGCCGACTGGG > 2:480094/1‑120 GAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCGCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGAGGCCGACGCCGC > 1:616771/1‑134 GAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCGCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGAGGCCGACGCCGC < 2:616771/134‑1 GCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGAGGCCGACGCCGCCACTGCCCGCGGGAACAGCCCGGCCGGTACCACATTGGGCAACAGCGCCTGGGTTGCCGGCATTTTGAATGAGCGGCTGGCGCCGAGCAGGAAGGC < 2:2335080/150‑1 GCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGAGGCCGACGCCGCCACTGCCCGCGGGAACAGCCCGGCCGGTACCACATTGGGCAACAGCGCCTGGGTTGCCGGCATTTCGAATGAGCGGCTGGCGCCGAGCAGGAAGGC > 2:784304/1‑150 GCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGAGGCCGACGCCGCCACTGCCCGCGGGAACAGCCCGGCCGGTACCACATTGGGCAACAGCGCCTGGGTTGCCGGCATTTCGAATGAGCGGCTGGCGCCGAGCAGGAAGGC > 2:892998/1‑150 GCCACCGACAACGTCACCCGCGAACTGATCTTTGCTCTGGCCTTCCTGCTCGGCGCCAGCCGCTCATTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5277385‑5277534‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGAGGCCGACGCCGCCACTGCCCGCGGGAACAGCCCGGCCGGTACCACATTGGGCAACAGCGCCTGGGTTGCCGGCATTTCGAATGAGCGGCTGGCGCCGAGCAGGAAGGC < NC_002947/5277572‑5277424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |