New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 158355493 (1.050)6 (0.070) 6/234 NT 6.1% intergenic (+68/+50) ttgR/PP_1388 HTH‑type transcriptional regulator TtgR/EmrB/QacA family drug resistance transporter
?NC_002947 = 1583575 95 (1.130)intergenic (+89/+29) ttgR/PP_1388 HTH‑type transcriptional regulator TtgR/EmrB/QacA family drug resistance transporter

Only 100 of 115 total aligned reads displayed.

GAAAAATGGGTCGACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCCAGCAACCGCCCCTGCGTCCCC  >  NC_002947/1583427‑1583724
                                                                                                                                                    |                                                                                                                                                     
gAAAAATGGGTCGACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAg                                                                                                                                                      <  1:1148012‑M2/150‑2 (MQ=255)
           cGACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGc                                                                                                                                           >  2:238445/1‑150 (MQ=255)
               acCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAgg                                                                                                                                                     <  1:1015267‑M2/136‑3 (MQ=255)
               acCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAgg                                                                                                                                                     >  2:1015267‑M2/1‑134 (MQ=255)
                    gCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGc                                                                                                                                  <  1:1127546/150‑1 (MQ=255)
                      tGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCCGCTGGTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGt                                                                                                                                <  1:2371752/150‑1 (MQ=255)
                              ctgcGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCa                                                                                                                        >  1:1653589/1‑150 (MQ=255)
                               tgcGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAg                                                                                                                       >  2:1689439/1‑150 (MQ=255)
                               tgcGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAg                                                                                                                       >  2:1154902/1‑150 (MQ=255)
                                          ccGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCGTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCaa                                                                                                            >  1:1043665/1‑150 (MQ=255)
                                               tctGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCCGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGcc                                                                                                       >  2:170700/1‑150 (MQ=255)
                                               tctGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGcc                                                                                                       <  2:1470187/150‑1 (MQ=255)
                                               tctGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATCATGGTCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGCCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGcc                                                                                                       <  1:782049/150‑1 (MQ=255)
                                                   cgcAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGc                                                                                                                             >  2:136050/1‑124 (MQ=255)
                                                   cgcAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGc                                                                                                                             <  1:136050/124‑1 (MQ=255)
                                                     cAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTCTTGGGTTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCTAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCgg                                                                                                 >  2:943729/1‑150 (MQ=255)
                                                      aaaTGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGc                                                                                                                      <  1:756230/128‑1 (MQ=255)
                                                      aaaTGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGc                                                                                                                      >  2:756230/1‑128 (MQ=255)
                                                      aaaTGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCggg                                                                                                <  1:1154902/150‑1 (MQ=255)
                                                          gACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAg                                                                                            <  1:917295/150‑1 (MQ=255)
                                                          gACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAg                                                                                            <  1:1443593/150‑1 (MQ=255)
                                                             acTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGcc                                                                                         >  1:1742431/1‑150 (MQ=255)
                                                              cTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCa                                                                                        <  1:1651242/150‑1 (MQ=255)
                                                               tttGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAg                                                                                       >  1:337297/1‑150 (MQ=255)
                                                                   ttAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGt                                                                                                                                    >  1:1452431/1‑101 (MQ=255)
                                                                   ttAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCg                                                                                                      <  1:914763/131‑1 (MQ=255)
                                                                   ttAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCg                                                                                                      >  2:914763/1‑131 (MQ=255)
                                                                   ttAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGcc                                                                                   >  2:1989129/1‑150 (MQ=255)
                                                                   ttAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGcc                                                                                   >  2:790198/1‑150 (MQ=255)
                                                                      aGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCa                                                                                >  1:839532/1‑150 (MQ=255)
                                                                       ggATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCATTGCCGCaa                                                                               <  1:1689439/150‑1 (MQ=255)
                                                                       ggATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCaa                                                                               <  2:1625063/150‑1 (MQ=255)
                                                                          ttGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTTTTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGTCCGCGCAATTGCCGATCGGGCAAGGCTAGTGCCGCAAGCa                                                                            >  2:1938902/1‑150 (MQ=255)
                                                                              gAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCTGAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTcc                                                                        >  1:23453/1‑150 (MQ=255)
                                                                                  gAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAAtt                                                                                                          >  1:890248/1‑112 (MQ=255)
                                                                                  gAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAAtt                                                                                                          <  2:890248/112‑1 (MQ=255)
                                                                                       tttCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGctc                                                                                                                                               >  1:2003306/1‑70 (MQ=255)
                                                                                       tttCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGctc                                                                                                                                               <  2:2003306/70‑1 (MQ=255)
                                                                                         tCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGcga                                                             >  1:2388750/1‑150 (MQ=255)
                                                                                          ccccTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGcgac                                                            >  2:700764/1‑150 (MQ=255)
                                                                                           cccTTTGTGTTAAGGGGGCATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGcgacg                                                           >  1:1776891/1‑150 (MQ=255)
                                                                                             cTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCgacgac                                                         >  1:2325429/1‑150 (MQ=255)
                                                                                             cTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCgacgac                                                         >  2:1098308/1‑150 (MQ=255)
                                                                                              tttGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGAcc                                                        >  2:1224988/1‑150 (MQ=255)
                                                                                                 gtgtTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGAAAGGCCAGTGCTGTCAGGATCTCCATCACAGCGACGACCGCa                                                     >  2:1720053/1‑150 (MQ=255)
                                                                                                  tgtTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCAc                                                    >  1:1174715/1‑150 (MQ=255)
                                                                                                       aGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTcccc                                               <  1:961640/150‑1 (MQ=255)
                                                                                                        gggggTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCa                                              >  1:643867/1‑150 (MQ=255)
                                                                                                         ggggTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCAt                                             <  1:1989129/150‑1 (MQ=255)
                                                                                                          gggTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAg                                                                                                                       >  1:1631419/1‑75 (MQ=255)
                                                                                                          gggTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAg                                                                                                                       <  2:1631419/75‑1 (MQ=255)
                                                                                                          gggTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAgg                                                                                           >  1:687709/1‑103 (MQ=255)
                                                                                                          gggTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAgg                                                                                           <  2:687709/103‑1 (MQ=255)
                                                                                                          gggTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATc                                            >  1:1801290/1‑150 (MQ=255)
                                                                                                          gggTATAAAGGGCATGGCCACCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGCCCGCACTCCCCATc                                            >  2:527826/1‑150 (MQ=255)
                                                                                                          ggctATTACGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCCGCCCCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATc                                            <  1:773984/147‑1 (MQ=255)
                                                                                                           ggTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATca                                           <  1:950663/150‑1 (MQ=255)
                                                                                                           ggTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATca                                           >  2:1886249/1‑150 (MQ=255)
                                                                                                               ttAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGt                                                                                                                                    <  2:398144/57‑1 (MQ=255)
                                                                                                               ttAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGt                                                                                                                                    >  1:398144/1‑57 (MQ=255)
                                                                                                               ttAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCa                                                                                                                        >  2:363917/1‑69 (MQ=255)
                                                                                                               ttAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCa                                                                                                                        <  1:363917/69‑1 (MQ=255)
                                                                                                                 aaGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCt                                     <  1:1655411/150‑1 (MQ=255)
                                                                                                                  agagcgtGGCCGCAATGCTGCTGTTCGTAGCACAAGGCGGCTCTTGGAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCCAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTg                                    >  2:1133135/7‑150 (MQ=255)
                                                                                                                  aGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAggcggccatgcccttaatacccccttaacacaaaggggaaacactccctcacaatccttaacaaagtgtcatttgcgcagagccgggctcaagcgcagcatatcca                                             <  1:1077148‑M2/141‑107 (MQ=255)
                                                                                                                  aGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAggcggccatgcccttaatacccccttaacacaaaggggaaacactccctcacaatccttaacaaagtgtcatttgcgcagagccgggctcaagcgcagcatatcca                                             >  2:1077148‑M2/1‑35 (MQ=255)
                                                                                                                  aGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTc                                                                         <  1:295396/113‑1 (MQ=255)
                                                                                                                  aGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTc                                                                         >  2:295396/1‑113 (MQ=255)
                                                                                                                  aGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCAGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGTAGCTg                                    >  2:416497/1‑150 (MQ=255)
                                                                                                                   gggCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAg                                                                                                                              >  2:541861/1‑59 (MQ=255)
                                                                                                                   gggCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGc                                   <  1:700764/150‑1 (MQ=255)
                                                                                                                   gggCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGc                                   >  1:795261/1‑150 (MQ=255)
                                                                                                                     gCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGcc                                  <  1:120027/149‑1 (MQ=255)
                                                                                                                     gCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGcc                                  >  2:120027/1‑149 (MQ=255)
                                                                                                                      cATGGCCGCCCTGCGGCTGTTCGCAGCACAAggcggccatgcccttaatacccccttaacacaaaggggaaaca                                                                                                            <  2:1168554‑M2/74‑44 (MQ=255)
                                                                                                                      cATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCgg                                >  2:777913/1‑150 (MQ=255)
                                                                                                                        tGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGaa                              <  2:643867/150‑1 (MQ=255)
                                                                                                                           ccgccCTGCGGCTGTTCGCAGCACAAggcggccatgcccttaatacccccttaacacaaaggggaaacactccctcacaatccttaacaaagt                                                                                    <  2:218199‑M2/93‑68 (MQ=255)
                                                                                                                           ccgccCTGCGGCTGTTCGCAGCACAAggcggccatgcccttaatacccccttaacacaaaggggaaacactccctcacaatccttaacaaagt                                                                                    >  1:218199‑M2/1‑26 (MQ=255)
                                                                                                                           ccgccCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGt                           >  2:1027284/1‑150 (MQ=255)
                                                                                                                             gccCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGttt                         >  1:2247826/1‑150 (MQ=255)
                                                                                                                              cccTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTc                        <  1:857854/150‑1 (MQ=255)
                                                                                                                                cTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCCa                      >  1:1362402/1‑150 (MQ=255)
                                                                                                                                cTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCCa                      <  2:2325429/150‑1 (MQ=255)
                                                                                                                                 tGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCCAg                     >  1:433776/1‑150 (MQ=255)
                                                                                                                                     gCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCCAGCAAc                 >  1:2166764/1‑150 (MQ=255)
                                                                                                                                        gTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCCAGCAACCGc              >  1:818391/1‑150 (MQ=255)
                                                                                                                                         ttCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCCTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCCAGCAACCGcc             >  1:1001224/1‑150 (MQ=255)
                                                                                                                                          tCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGGCTTCAGCGGCCGAGCAATGGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCCAGCAACCGccc            <  2:571633/150‑1 (MQ=255)
                                                                                                                                            gcagcaCAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGc                                                                             >  2:1993041/1‑83 (MQ=255)
                                                                                                                                            gcagcaCAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGc                                                                             <  1:1993041/83‑1 (MQ=255)
                                                                                                                                            gcagcaCAAGGCGGCTCTTGCAGCGAGTGCGTAGCCCTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACTTTTCCAGCAACCGCCCCt          <  2:1001224/150‑1 (MQ=255)
                                                                                                                                              tctctgaggaggCTTTTTTAGCGAGTGCGTATCCTTCAGCTGCCACGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCCAGCAACCGCCCCTGc        <  2:1343048/144‑1 (MQ=255)
                                                                                                                                              agcaCAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCCAGCAACCGCCCCTgg        <  2:1653589/150‑2 (MQ=255)
                                                                                                                                                 acaAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTccc                                                >  2:2022879/1‑107 (MQ=255)
                                                                                                                                                 acaAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTccc                                                <  1:2022879/107‑1 (MQ=255)
                                                                                                                                                  caAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCACGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCCAGCAACCGCCCCTGCgaga    >  1:1343048/1‑147 (MQ=255)
                                                                                                                                                   aaGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCt                                     >  1:52319/1‑116 (MQ=255)
                                                                                                                                                    aGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCCAGCAACCGCCCCTGCGTcccc  <  2:839532/150‑1 (MQ=255)
                                                                                                                                                    aGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCCAGCAACCGCCCCTGCGTcccc  <  1:1938902/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GAAAAATGGGTCGACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCCAGCAACCGCCCCTGCGTCCCC  >  NC_002947/1583427‑1583724

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.