| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2651868 = | 82 (0.930) | 9 (0.110) | 9/238 | NT | 9.7% | coding (593/1113 nt) | aroF‑I | tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
| ? | NC_002947 | 2651914 = | 88 (1.030) | coding (547/1113 nt) | aroF‑I | tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase | |||||
GCAAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2651915‑2651868‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTCGGTGGCGGTCGGCAGGCCCATTTCGGCCAGGTCCAGCAGCAACTTGCGGCCGATGTGCAGGCCGTC > NC_002947/2651914‑2652061 GCAAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGTGTTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGC > 1:1899253/1‑110GCAAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGTGTTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGC < 2:1899253/110‑1 CAAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTCGGTGGCGGTCGGCAGGCCCAT > 2:1766916/1‑150 AACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTCGGTGGCGGTCGGCAGGCCCATTT > 2:355661/1‑150 ACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTCGGTGGCGGTCGGCAGGCCCATTTC > 2:2127625/1‑150 ACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGTGTTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTCGGTGGCGGTCGGCAGGCCCATTTCGGCC > 1:2142086/1‑150 CGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTGCGATTCGGTGGTGCGGGCACCGAT > 1:1589210/1‑63 CGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTGCGATTCGGTGGTGCGGGCACCGAT < 2:1589210/63‑1 ATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTCGGTGGCGGTCGGCAGGCCCATTTCGGCCAGGTCCAG < 1:1766916/150‑1 TTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTCGGTGGCGGTCGGCAGGCCCATTTCGGCCAGGTCCAGCAGCAACTTGCGGCCGATGTGCAGGCCGT > 1:473110/1‑150 TTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTCGGTGGCGGTCGGCAGGCCCATTTCGGCCAGGTCCAGCAGCAACTTGCGGCCGATGTGCAGGCCGT > 1:661666/1‑150 TTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGG > 1:627199/1‑73 TTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGG < 2:627199/73‑1 TTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTCGGTGGCGGTCGGCAGGCCCATTTCGGCCAGGTCCAGCAGCAACTTGCGGCCGATGTGCAGGCCGTC < 1:1937431/150‑1 GCAAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2651915‑2651868‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTCGGTGGCGGTCGGCAGGCCCATTTCGGCCAGGTCCAGCAGCAACTTGCGGCCGATGTGCAGGCCGTC > NC_002947/2651914‑2652061 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |