New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4946641 =94 (1.060)10 (0.120) 9/234 NT 10.0% coding (764/777 nt) fliR flagellar biosynthetic protein FliR
?NC_002947 4946676 = 91 (1.080)coding (729/777 nt) fliR flagellar biosynthetic protein FliR

Only 100 of 126 total aligned reads displayed.

CGGCACCCGCCAGGGTCACCGCCACCGTGTTCAGCTCCTTGGAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGCGGGAAGCCGATGGAGAAAATGTTCAGCTGCGGCGCGGCGCGG  >  NC_002947/4946493‑4946790
                                                                                                                                                    |                                                                                                                                                      
gctggtggtgaacattgcctttggcgtaatgacccgcgccgcgccgcagctgaacattttctccatcggcttcccgctgaccttggtcatgggcatgttcatcttctgggtcggcctggccgatgtcttgtcccactatcaggcattgGc                                                                                                                                                       >  2:1500375‑M1/149‑150 (MQ=255)
cGGCACCCGCCAGGGTCACCGCCACCGTGTTCAGCTCCTTGGAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGc                                                                                                                                                       <  1:940914/150‑1 (MQ=255)
cGGCACCCGCCAGGGTCACCGCCACCGTGTTCAGCTCCTTGGAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGc                                                                                                                                                       <  2:1215014/150‑1 (MQ=255)
  ccACCCGCCAGGGTCACCGCCACCGTGTTCAGCTCCTTGGAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCa                                                                                                                                                     <  1:189874/149‑1 (MQ=255)
   cACCCGCCAGGGTCACCGCCACCGTGTTCAGCTCCTTGGAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAg                                                                                                                                                    <  1:1481901/150‑1 (MQ=255)
     tggtgaacattgcctttggcgtaatgacccgcgccgcgccgcagctgaacattttctccatcggcttcccgctgaccttggtcatgggcatgttcatcttctgggtctgcctggccgatgtcttgtcccactatcaggcattgGCCa                                                                                                                                                     >  2:2081194‑M1/144‑147 (MQ=255)
     tggtgaacattgcctttggcgtaatgacccgcgccgcgccgcagctgaacattttctccatcggcttcccgctgaccttggtcatgggcatgttcatcttctgggtcggcctggccgatgtcttgtcccactatcaggcattgGCCa                                                                                                                                                     <  1:2081194‑M1/4‑1 (MQ=255)
      ccGCCAGGGTCACCGCCACCGTGTTCAGCTCCTTGGAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTc                                                                                                                                                 >  1:2086838/1‑150 (MQ=255)
      ccGCCAGGGTCACCGCCACCGTGTTCAGCTCCTTGGAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTc                                                                                                                                                 >  1:2003855/1‑150 (MQ=255)
       gtgaacattgcctttggcgtaatgacccgcgccgcgccgcagctgaacattttctccatcggcttcccgctgaccttggtcatgggcatgttcatcttctgggtcggcctggccgatgtcttgtcccactatcaggcattgGCCAGCTCa                                                                                                                                                <  2:485402‑M1/9‑1 (MQ=255)
          aacattgcctttggcgtaatgacccgcgccgcgccgcagctgaacattttctccatcggcttcccgctgaccttggtcatgggcatgttcatcttctgggtcggcctggccgatgtcttgtcccactatcaggcattgg                                                                                                                                                        >  1:2163126‑M1/139‑139 (MQ=255)
          aacattgcctttggcgtaatgacccgcgccgcgccgcagctgaacattttctccatcggcttcccgctgaccttggtcatgggcatgttcatcttctgggtcggcctggccgatgtcttgtcccactatcaggcattgg                                                                                                                                                        <  2:2163126‑M1/1‑1 (MQ=255)
                 aCCGCCACCGTGTTCAGCTCCTTGGAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCAtt                                                                                                                                     >  2:913273/1‑150 (MQ=255)
                  ctttggcgtaatgacccgcgccgcgccgcagctgaacattttctccatcggcttcccgctgaccttggtcatgggcatgttcatcttctgggtcggcctggccgatgtcttgtcccactatcaggcattgGCCAGCTCA‑CGCAGCCATTg                                                                                                                                    <  1:1155671‑M1/20‑1 (MQ=255)
                     ccACCGTGTTCAGCTCCTTGGAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAg                                                                                                                                 >  1:2353761/1‑150 (MQ=255)
                      cACCGTGTTCAGCTCCTTGGAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGc                                                                                                                                <  2:2003855/150‑1 (MQ=255)
                          gtgtTCAGCTCCTTGGAGCGGGCGACCTCGCCCTTCTCTCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCCCCAGCTCA‑CGCAGCCATTGCAGCGttt                                                                                                                            >  2:184960/1‑150 (MQ=255)
                          gtgtTCAGCTCCTTGGAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGttt                                                                                                                            <  1:913273/150‑1 (MQ=255)
                             ttCAGCTCCTTGGCGCGGGACACCCCGCCGTGGTCGCCGGCGTCGCGCTTGCGATTTTCGGTTGGGTATTTCGGCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CACAGCCATTGCAGCGTTTCGc                                                                                                                         <  1:655895/150‑1 (MQ=255)
                             ttCAGCTCCTTGGAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTAGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGc                                                                                                                         <  2:2406096/150‑1 (MQ=255)
                             tgacccgcgccgcgccgcagctgaacattttctccatcggcttcccgctgaccttggtcatgggcatgttcatcttctgggtcggcctggccgatgtcttgtcccactatcaggcattgGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGc                                                                                                                         <  1:1180787‑M1/31‑1 (MQ=255)
                              gacccgcgccgcgccgcagctgaacattttctccatcggcttcccgctgaccttggtcatgggcatgttcatcttctgggtcggcctggccgatgtcttgtcccactatcaggcattgGCCAGCGAAACGCAGCCATTGCAGCGTTTCGc                                                                                                                         >  1:1391811‑M1/119‑150 (MQ=255)
                                aGCTCCTTGGAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATTCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTgg                                                                                                                      >  1:1131971/1‑150 (MQ=255)
                                     gccgcgccgcagctgaacattttctccatcggcttcccgctgaccttggtcatgggcatgttcatcttctgggtcggcctggccgatgtcttgtcccactatcaggcattgGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAAt                                                                                                                 >  2:1180787‑M1/112‑150 (MQ=255)
                                         gAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCt                                                                                                             <  2:2353761/150‑1 (MQ=255)
                                         gAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAACGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCt                                                                                                             <  1:61286/150‑1 (MQ=255)
                                         cgccgcagctgaacattttctccatcggcttcccgctgaccttggtcatgggcatgttcatcttctgggtcggcctggccgatgtcttgtcccactatcaggcattgGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCt                                                                                                             >  2:1155671‑M1/108‑150 (MQ=255)
                                           gCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGa                                                                                                           >  1:1382087/1‑150 (MQ=255)
                                             gggCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCT‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATa                                                                                                         <  2:1392282/150‑1 (MQ=255)
                                              ggCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGcc                                                                                                                                        >  1:1969424/1‑118 (MQ=255)
                                               gCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGt                                                                                                       >  2:1146171/1‑150 (MQ=255)
                                               gCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGt                                                                                                       >  1:888596/1‑150 (MQ=255)
                                                gctgaacattttctccatcggcttcccgctgaccttggtcatgggcatgttcatcttctgggtcggcctggccgatgtcttgtcccactatcaggcattgGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATg                                                                                                                >  1:2190602‑M1/101‑140 (MQ=255)
                                                gctgaacattttctccatcggcttcccgctgaccttggtcatgggcatgttcatcttctgggtcggcctggccgatgtcttgtcccactatcaggcattgGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATg                                                                                                                <  2:2190602‑M1/40‑1 (MQ=255)
                                                cGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTg                                                                                                      <  2:88568/150‑1 (MQ=255)
                                                 gACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTgg                                                                                                     <  1:117573/150‑1 (MQ=255)
                                                   ccTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGACAGCGCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCGGATAGTGGGa                                                                                                   <  2:942971/150‑1 (MQ=255)
                                                      cGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACaa                                                                                                <  2:1173635/150‑1 (MQ=255)
                                                       gCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAg                                                                                               >  2:1921183/1‑150 (MQ=255)
                                                             ctcGCGGGCGTCGCGCTTGCGCTTTACGGCGGGGACTGCTGGCTTTTCCTTGCCGGGCTCGCTTGCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCg                                                                                         <  2:266691/150‑1 (MQ=255)
                                                                gcgGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGcc                                                                                      >  1:640930/1‑150 (MQ=255)
                                                                 cgGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCa                                                                                     <  2:1699223/150‑1 (MQ=255)
                                                                  gggCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAg                                                                                    <  2:640930/150‑1 (MQ=255)
                                                                    gCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGc                                                                                  <  1:1146171/150‑1 (MQ=255)
                                                                              tgcgcttTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCagaa                                                                        <  1:2207383/150‑1 (MQ=255)
                                                                               accttggtcatgggcatgttcatcttctgggtcggcctggccgatgtcttgtcccactatcaggcattgGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACaa                                                                                                <  1:1092383‑M1/56‑1 (MQ=255)
                                                                               accttggtcatgggcatgttcatcttctgggtcggcctggccgatgtcttgtcccactatcaggcattgGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACaa                                                                                                >  2:1092383‑M1/70‑125 (MQ=255)
                                                                                 gcttTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGAt                                                                     <  1:184960/150‑1 (MQ=255)
                                                                                            gggTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCAtt                                                                                                                                     >  1:1405072/1‑75 (MQ=255)
                                                                                            gggTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCAtt                                                                                                                                     <  2:1405072/75‑1 (MQ=255)
                                                                                            gggTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTgg                                                                                                     >  2:396206/1‑107 (MQ=255)
                                                                                            gggTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTgg                                                                                                     <  1:396206/107‑1 (MQ=255)
                                                                                            gggTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCa                                                          <  1:1924683/150‑1 (MQ=255)
                                                                                              gTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCt                                                                                                             >  1:1747029/1‑97 (MQ=255)
                                                                                              gTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCt                                                                                                             <  2:1747029/97‑1 (MQ=255)
                                                                                                 ttctGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGa                                                                                                   >  2:704476/1‑104 (MQ=255)
                                                                                                   ctGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTgg                                                                                                     <  2:1512482/100‑1 (MQ=255)
                                                                                                   ctGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTgg                                                                                                     >  1:1512482/1‑100 (MQ=255)
                                                                                                   ctGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCaa                                                   >  1:1887644/1‑150 (MQ=255)
                                                                                                    tGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAg                                                  >  1:1340973/1‑150 (MQ=255)
                                                                                                      tCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAAc                                                                 >  2:2351855/1‑133 (MQ=255)
                                                                                                      tCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGt                                                >  1:481389/1‑150 (MQ=255)
                                                                                                      tCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGt                                                >  1:1841021/1‑150 (MQ=255)
                                                                                                      tCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGCCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAAc                                                                 <  1:2351855/133‑1 (MQ=255)
                                                                                                        ttGTCCTGACCGCTCTCGCTTTCTGCCGTGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGc                                                                                                               <  2:1820925/85‑1 (MQ=255)
                                                                                                        ttGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACAt                                                                                           <  2:2309758/105‑1 (MQ=255)
                                                                                                        ttGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACAt                                                                                           >  1:2309758/1‑105 (MQ=255)
                                                                                                        ttGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAAc                                                                 <  2:2306923/131‑1 (MQ=255)
                                                                                                             cTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCTGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGCggg                                         >  2:1271254/1‑150 (MQ=255)
                                                                                                              tGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTgg                                                                                                     <  1:835551/89‑1 (MQ=255)
                                                                                                              tGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTgg                                                                                                     >  2:835551/1‑89 (MQ=255)
                                                                                                              tGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGAAGAAAAAGAAGATGAACGTGCCCATGACCTAGGTCAGCgggc                                        >  2:632861/1‑149 (MQ=255)
                                                                                                               gACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGAGGTCGGATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGCGGGaa                                       >  1:24488/1‑150 (MQ=255)
                                                                                                                 ccGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGCGGGAAGc                                     <  2:1887644/150‑1 (MQ=255)
                                                                                                                  cGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCg                                                                                         >  1:2058673/1‑97 (MQ=255)
                                                                                                                  cGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCg                                                                                         <  2:2058673/97‑1 (MQ=255)
                                                                                                                    ctctCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGCGGGAAGCCGa                                  >  1:31105/1‑150 (MQ=255)
                                                                                                                      ctcGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGCGGGAAGCCGATg                                >  1:1735314/1‑150 (MQ=255)
                                                                                                                               tGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCCGCGGGAAGCCGATGGAGAAAATg                       >  2:1219629/1‑150 (MQ=255)
                                                                                                                                gCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCCGGCCGATACCTGAGATGAACATGCCCATGACCAAGGTCAGCGGGAAGCCGATGGAGAAAATGt                      <  2:824637/150‑1 (MQ=255)
                                                                                                                                 ccATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGa                                                       <  1:800585/116‑1 (MQ=255)
                                                                                                                                 ccATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGa                                                       >  2:800585/1‑116 (MQ=255)
                                                                                                                                  cATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAAc                                                                 <  1:1582056/105‑1 (MQ=255)
                                                                                                                                   ctGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGCGGGAAGCCGATGGAGAAAATGTTCa                   >  1:598504/2‑150 (MQ=255)
                                                                                                                                   aTGCTCAGCGTACCCTCGCCGTCCCA‑CCCAGCCATTGCACCGTTCCGCTGGCCAATGGCTGATAGGGGGCCAGGACGTCGGCCTGGCCGACCCAGAAGGTGAACGTGCCCTTGGCCACGGGCCGCGGCAAGCCGAGGGAGAAAATGttga                   >  2:459122/1‑148 (MQ=255)
                                                                                                                                   aTGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGCGGGAAGCCGATGGAGAAAATGTTCa                   <  2:1735314/150‑1 (MQ=255)
                                                                                                                                   aTGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGCGGGAAGCCGATGGAGAAAATGTTCa                   >  1:302365/1‑150 (MQ=255)
                                                                                                                                   aTGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCATGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGCGGGAAGCCGATGGAGAAAATGTTCa                   >  1:1049008/1‑150 (MQ=255)
                                                                                                                                         aGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGaa                                                                  <  2:2272667/97‑1 (MQ=255)
                                                                                                                                         aGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGaa                                                                  >  1:2272667/1‑97 (MQ=255)
                                                                                                                                          gCGTAGCCTCGCCAGCGCA‑CGCAGCCATTGTAATGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGTCCCAGAACATGAACATGCCCATGACCAAGGTCAGCGGGAAGCCGATGGAGAAAATGTTCAGCTgcgg            <  2:1049008/150‑1 (MQ=255)
                                                                                                                                          gCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGa                                                       <  2:890348/107‑1 (MQ=255)
                                                                                                                                            gTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGCGGGAAGCCGATGGAGAAAATGTTCAGCTgcggcg          >  1:2036690/1‑150 (MQ=255)
                                                                                                                                                 cTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGAGGGAAGCCGATGGAGAAAATGTTCAGCTGcggcgcggcg     >  1:1098240/1‑150 (MQ=255)
                                                                                                                                                  tCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAggcca                                              >  1:1819951/1‑105 (MQ=255)
                                                                                                                                                  tCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGCGGGAAGCCGATGGAGAAAAt                        >  2:2119818/1‑130 (MQ=255)
                                                                                                                                                  tCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGCGGGAAGCCGATGGAGAAAATGTTCAGCTGCggcgcggcgc    >  1:1724843/1‑150 (MQ=255)
                                                                                                                                                    GCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAgg                                                 <  1:1584397‑M1/103‑1 (MQ=255)
                                                                                                                                                    GCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAgg                                                 >  2:1584397‑M1/1‑103 (MQ=255)
                                                                                                                                                    GCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGCGGGAAGCCGATGGAGAAAATGTTCAGCTGCGGcgcggcgcgg  >  2:1322287‑M1/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                      
CGGCACCCGCCAGGGTCACCGCCACCGTGTTCAGCTCCTTGGAGCGGGCGACCTCGCCCTTCTCGCGGGCGTCGCGCTTGCGCTTTTCGGTGGGGTCTTCTGTCTTGTCCTGACCGCTCTCGCTTTCTGCCATGCTCAGCGTACCCTCGCCAGCTCA‑CGCAGCCATTGCAGCGTTTCGCTGGCCAATGCCTGATAGTGGGACAAGACATCGGCCAGGCCGACCCAGAAGATGAACATGCCCATGACCAAGGTCAGCGGGAAGCCGATGGAGAAAATGTTCAGCTGCGGCGCGGCGCGG  >  NC_002947/4946493‑4946790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.