New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2746368	59 (0.670)	4 (0.050)	4/230	NT	6.8%	intergenic (‑13/+157)	PP_2401/PP_2402	membrane protein/sensor histidine kinase
	?	NC_002947	= 2746383	55 (0.660)					intergenic (‑28/+142)	PP_2401/PP_2402	membrane protein/sensor histidine kinase

GTGCGGTGGCACGAATGGCACTGCGCAAGCCGTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGCCCGATCAAGACACAAGGCCGTTCCCGCCAACGATCGC  >  NC_002947/2746220‑2746515                                                                                                                                                     |                                                                                                                                                      gTGCGGTGGCACGAATGGCACTGCGCAAGCCGTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCggg                                                                                                                                                      <  2:2010415/150‑1 (MQ=255) gTGCGGGGGCACGAATGGGACTGTGCAAGCCGTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCTGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCggg                                                                                                                                                      <  2:325849/150‑1 (MQ=255)   gCGGTGGCACGAATGGCATTGCGCAAGCCGTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGa                                                                                                                                                    <  2:346302/150‑1 (MQ=255)     ggTGGCACGAATGGCACTGCGCAAGCCGTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGt                                                                                                                                                  <  1:560881/150‑1 (MQ=255)      gTGGCACGAATGGCACTGTGCAAGCCGTCGGGGTCGGGTTGGCTGGCCAGGACCATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTg                                                                                                                                                 >  1:1260964/1‑150 (MQ=255)          cACGAATGGCACTGCGCAAGCCGTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTTAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTtg                                                                                                                                             <  1:466748/150‑1 (MQ=255)           aCGAATGGCACTGCGCAAGCCGTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGTTCATCGCCAAGGTCAGGCCGGCGAAAGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTtgt                                                                                                                                            >  1:43050/1‑150 (MQ=255)                tGGCACTGCGCAAGCCGTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATAGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGAc                                                                                                                                       >  2:88591‑M2/1‑149 (MQ=255)                    aCTGCGCAAGCCGTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGAccggg                                                                                                                                   <  1:1035747‑M2/150‑6 (MQ=255)                     cTGCGCAAGCCGTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGAccggga                                                                                                                                  >  2:1216205‑M2/1‑144 (MQ=255)                          cAAGCCGTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGtc                                                                                                                           >  1:1435045/1‑150 (MQ=255)                           aaGCCGTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGTAGTGtct                                                                                                                          <  1:1001170/150‑1 (MQ=255)                             gCCGGCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCAGCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGCTGATGGCTTTCATCAGGGACTCCCGGGGACTGGTTGTGTGA‑‑CCGGGAGTGTCTCg                                                                                                                        <  2:427750/150‑1 (MQ=255)                              ccGTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGa                                                                                                                       <  2:1035747/150‑1 (MQ=255)                               cGTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAg                                                                                                                      >  1:1523887/1‑150 (MQ=255)                                gTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAgg                                                                                                                     <  2:419773/150‑1 (MQ=255)                                   tGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCgg                                                                                                                  <  1:2311229/150‑1 (MQ=255)                                   tGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCGTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCgg                                                                                                                  <  1:1492794/150‑1 (MQ=255)                                    gggTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCggg                                                                                                                 <  1:166000/150‑1 (MQ=255)                                     ggTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGt                                                                                                                                               <  2:1796038/121‑1 (MQ=255)                                     ggTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGt                                                                                                                                               >  1:1796038/1‑121 (MQ=255)                                           gTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCggg                                                                                                                                                      >  2:1034705/1‑108 (MQ=255)                                           gTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCggg                                                                                                                                                      <  1:1034705/108‑1 (MQ=255)                                              ggctggcCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAg                                                                                                       <  1:1135583/150‑1 (MQ=255)                                              ggctggcCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAg                                                                                                       >  2:1483506/1‑150 (MQ=255)                                              ggctggcCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAg                                                                                                       <  2:143637/150‑1 (MQ=255)                                                      aGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGAccggga                                                                                                                                  <  2:1971277‑M2/117‑7 (MQ=255)                                                      aGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGATTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGAccggga                                                                                                                                  >  1:1971277‑M2/1‑111 (MQ=255)                                                        gACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAggg                                                                                             <  1:348673/150‑1 (MQ=255)                                                          cTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAggggg                                                                                           <  1:1896516/150‑1 (MQ=255)                                                               gCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCa                                                                                      >  2:415537/1‑150 (MQ=255)                                                                cGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAg                                                                                     <  1:415537/150‑1 (MQ=255)                                                                  gTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGtcacacaaccactccccgggagtcc                                                                                                                              <  2:290727‑M1/109‑26 (MQ=255)                                                                  gTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGtcacacaaccactccccgggagtcc                                                                                                                              >  1:290727‑M1/1‑84 (MQ=255)                                                                    cATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTtgt                                                                                 <  2:899890/150‑1 (MQ=255)                                                                      tCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTtgtgg                                                                               >  1:1459137/1‑149 (MQ=255)                                                                        gCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTAt                                                                             >  1:2275532/1‑150 (MQ=255)                                                                         ccAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGtt                                                                                                                                              >  1:2356672/1‑86 (MQ=255)                                                                         ccAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGtt                                                                                                                                              <  2:2356672/86‑1 (MQ=255)                                                                         ccAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGtt                                                                                                                                              >  2:2082559/1‑86 (MQ=255)                                                                         ccAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGtt                                                                                                                                              <  1:2082559/86‑1 (MQ=255)                                                                         ccAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGAt                                                                                         >  2:1586595/1‑137 (MQ=255)                                                                         ccAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGAt                                                                                         <  1:1586595/137‑1 (MQ=255)                                                                          cAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCt                                                                           >  2:1194747/1‑150 (MQ=255)                                                                              gTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGttt                                                                       <  2:1260964/150‑1 (MQ=255)                                                                              gTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGttt                                                                       <  2:43050/150‑1 (MQ=255)                                                                                    ccGGCGAGGGCGGGAGACAGCTTCCAGCTGGGGGGGAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑ACGGGAGTGTCTGGAGGCGGGGTATCTGCAGTGTGTCCGGGGGATGCATTTGTGTATCTGTTTGTagag                                                                 <  2:285205/150‑1 (MQ=255)                                                                                                  gAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGttt                                                   >  2:1684735/1‑150 (MQ=255)                                                                                                   aaCAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGTAGTGGTTGTGTGAccgg                                                                                                                                    <  2:742120‑M2/70‑5 (MQ=255)                                                                                                   aaCAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGTAGTGGTTGTGTGAccgg                                                                                                                                    >  1:742120‑M2/1‑66 (MQ=255)                                                                                                    aCAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGtcacacaaccactccccgg                                                                                                                                    <  2:1054737‑M1/69‑20 (MQ=255)                                                                                                    aCAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGtcacacaaccactccccgg                                                                                                                                    >  1:1054737‑M1/1‑50 (MQ=255)                                                                                                     cAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTAt                                                                             <  2:1573186/121‑1 (MQ=255)                                                                                                     cAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTAt                                                                             >  1:1573186/1‑121 (MQ=255)                                                                                                     cAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTAc                                                >  2:1324508/1‑150 (MQ=255)                                                                                                             aGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACgg                                        >  1:58256/1‑150 (MQ=255)                                                                                                              gCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGc                                       >  1:1675941/1‑150 (MQ=255)                                                                                                              gCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGc                                       <  2:1675941/150‑1 (MQ=255)                                                                                                                cGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑GCGGGAGTGTCTGGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTTTCTGTTGGTAGAGGCGACCGCGCGTTTTACAGGAACGGccc                                     >  1:1118507/1‑150 (MQ=255)                                                                                                                cGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGccc                                     >  1:757377/1‑150 (MQ=255)                                                                                                                   aGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGCCCGAt                                  <  1:1483506/150‑1 (MQ=255)                                                                                                                    gggCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGCCCGATc                                 <  1:1093279/150‑1 (MQ=255)                                                                                                                      gCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGCCCGATCaa                               <  2:2275532/150‑1 (MQ=255)                                                                                                                        aaGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGCGAAGCCGGCA‑AGT‑TGGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGCCCGATCAAGa                             <  2:64092/150‑1 (MQ=255)                                                                                                                            tGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGc                                                                                                         <  2:1373544/70‑1 (MQ=255)                                                                                                                            tGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGc                                                                                                         >  1:1373544/1‑70 (MQ=255)                                                                                                                               gggCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGCCCGATCAAGACACAAgg                      <  2:1523887/150‑1 (MQ=255)                                                                                                                               gggCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGCCCGATCAAGACACAAgg                      <  1:1194747/150‑1 (MQ=255)                                                                                                                                 gCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGCCCGATCAAGACACAAGGcc                    <  2:757377/150‑1 (MQ=255)                                                                                                                                  cTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGAt                                                                                         >  1:1087651/1‑80 (MQ=255)                                                                                                                                  cTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGAt                                                                                         <  2:1087651/80‑1 (MQ=255)                                                                                                                                      catcaGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGCCCGATCAAGACACAAGGCCGTTcc               <  1:1324508/150‑1 (MQ=255)                                                                                                                                         caGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGCCCGATCAAGa                             >  1:1723356/1‑133 (MQ=255)                                                                                                                                         caGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGCCCGATCAAGa                             <  2:1723356/133‑1 (MQ=255)                                                                                                                                            ggACTCCCGGGGAGTGGTTGTGTGAccgggagtccctgatgaaagccctcaccttgccctccggctggaagctgttcgccgccctcgccggcctgaccttggcgatgac                                                    <  2:290727‑M2/109‑85 (MQ=255)                                                                                                                                            ggACTCCCGGGGAGTGGTTGTGTGAccgggagtccctgatgaaagccctcaccttgccctccggctggaagctgttcgccgccctcgccggcctgaccttggcgatgac                                                    >  1:290727‑M2/1‑25 (MQ=255)                                                                                                                                            ggACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGCCGGATCAAGACACAAGGc                     >  1:1810576/1‑138 (MQ=255)                                                                                                                                            ggACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGCCCGATCAAGACACAAGGc                     <  2:1810576/138‑1 (MQ=255)                                                                                                                                                tCCCGGtcacacaaccactccccgggagtccctgatgaaatccctcaccttgccctccggctggaagctgttcgccgccctcgccggcctgaccttggcgatgaccgccatagtcct                                        >  1:1971277‑M1/1‑6 (MQ=255)                                                                                                                                                tCCCGGtcacacaaccactccccgggagtccctgatgaaagccctcaccttgccctccggctggaagctgttcgccgccctcgccggcctgaccttggcgatgaccgccatagtcctggccagccaacccgacccagacggcttgcgcag       >  2:1216205‑M1/1‑6 (MQ=255)                                                                                                                                                tCCCGGtcacacaaccactccccgggagtccctgatgaaagccctcaccttgccctccggctggaagctgttcgccgccctcgccggcctgaccttggcgatgaccgccatagtcct                                        <  2:1971277‑M1/117‑112 (MQ=255)                                                                                                                                                 cccGGtcacacaaccactccccgggagtccctgatgaaagccctcaccttgccctccggctggaagctgttcgccgccctcgccggcctgaccttggcgatgaccgccatagtcctggccagccaacccgacccagacggcttgcgcagt      <  1:1035747‑M1/150‑146 (MQ=255)                                                                                                                                                 cccGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGCCCGATCAAGACACAAGGCCGTTCCCGCCAACGATc    <  2:58256/150‑1 (MQ=255)                                                                                                                                                  ccGGtcacacaaccactacccgggagtccctgatgaaagccctcaccttgccctccggctggaagctgtt                                                                                     <  2:742120‑M1/70‑67 (MQ=255)                                                                                                                                                  ccGGtcacacaaccactacccgggagtccctgatgaaagccctcaccttgccctccggctggaagctgtt                                                                                     >  1:742120‑M1/1‑4 (MQ=255)                                                                                                                                                  ccGGGGAGTGGTTGTGTGAccgggagtccctgatgaaagccctcaccttgccctccggctggaagctgt                                                                                      >  1:1054737‑M2/1‑19 (MQ=255)                                                                                                                                                  ccGGGGAGTGGTTGTGTGAccgggagtccctgatgaaagccctcaccttgccctccggctggaagctgt                                                                                      <  2:1054737‑M2/69‑51 (MQ=255)                                                                                                                                                  ccGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTg                                                                      >  2:471423/1‑83 (MQ=255)                                                                                                                                                  ccGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTg                                                                      <  1:471423/83‑1 (MQ=255)                                                                                                                                                  ccGGGGAGTGGTCGTGAAA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTATGTCAGGGGAATGCAATTGTGTATCTGTTTGTAGAGGCGACGGCGCGTTTTACAGGAACAGCCCGATCAAGACACAAGGCCGTTCCCGCCAACGCTCg   >  2:577145/1‑150 (MQ=255)                                                                                                                                                     gtcacacaaccactccccgggagtccctgatgaaagccctcaccttgccctccggctggaagctgttcgccgccctcgccggcctgaccttggctatgaccgccatagtcctggccagccaacccgacccagacggcttgcgcagtgcca  >  2:88591‑M1/1‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      GTGCGGTGGCACGAATGGCACTGCGCAAGCCGTCTGGGTCGGGTTGGCTGGCCAGGACTATGGCGGTCATCGCCAAGGTCAGGCCGGCGAGGGCGGCGAACAGCTTCCAGCCGGAGGGCAAGGTGAGGGCTTTCATCAGGGACTCCCGGGGAGTGGTTGTGTGA‑‑CCGGGAGTGTCTCGAGGCGGGGTATCTGCAGTGTGTCAGGGGGATGCAGTTGTGTATCTGTTTGTAGAGGCGACCGCGCGTTTTACAGGAACGGCCCGATCAAGACACAAGGCCGTTCCCGCCAACGATCGC  >  NC_002947/2746220‑2746515

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.