| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 414338 = | 13 (0.760) | 3 (0.180) | 3/268 | 1.9 | 20.3% | coding (153/1050 nt) | waaF | ADP‑heptose:LPS heptosyltransferase II |
| ? | NC_002947 | 414374 = | 11 (0.660) | coding (189/1050 nt) | waaF | ADP‑heptose:LPS heptosyltransferase II | |||||
GGGAATGCCGGCAAAAAAGGGCACCAGCGCCGACTTGAGCGAGTTGGGCAGCAGGATGGCCTGGTCGTACTGGCCGGCCAGGGACTTGCCGATGCGCCGCCGCGTGGCCAGCTCCAGCGCGCCGTGGCCGAGCGGGAAGCTCAAGGCCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/414491‑414338‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcGCTGGAGCTGGCCACGCGGCGGCGCATCGGCAAGTCCCTGGCCGGCCAGTACGACCAGGCCATCCTGCTGCCCAACTCGCTCAAGTCGGCGCTGGTGCCCTTTTTTGCCGGCATTCCCAAACGCACCGGCTGGCGCGGTGAAATGC > NC_002947/414374‑414519 GGGAATGCCGGCAAAAAAGGGCACCAGCGCCGACTTGAGCGAGTTGGGCAGCAGGATGGCCTGGTCGTACTGGCCGGCCAGGGACTTGCCGATGCGCCGCCGCGTGGCCAGCTCCAGCGCGCCGTGGCCGAGCGGGAAGCTCAAGGCCTG < 2:376409/150‑1 CAGCTCCAGCGCGCCGTGGCCGAGCGGGAAGCTCAAGGCCTGGCGCGCTGGAGCTGGCCACGCGGCGGCGCATCGGCAAGTCCCTGGCCGGCCAGTACGACCAGGCCATCCTGCTGCCCAACTCGCTCAAGTCGGCGCTG > 1:402256/1‑140 CAGCTCCAGCGCGCCGTGGCCGAGCGGGAAGCTCAAGGCCTGGCGCGCTGGAGCTGGCCACGCGGCGGCGCATCGGCAAGTCCCTGGCCGGCCAGTACGACCAGGCCATCCTGCTGCCCAACTCGCTCAAGTCGGCGCTG < 2:402256/140‑1 GCGCCGTGGCCGAGCGGGAAGCTCAAGGCCTGGCGCGCTGGAGCTGGCCACGCGGCGGCGCATCGGCAAGTCCCTGGCCGGCCAGTACGACCAGGCCATCCTGCTGCCCAACTCGCTCAAGTCGGCGCTGGTGCCCTTTTTTGCCGGCAT > 1:183245/1‑150 gcaCGCTGGAGCTGGCCACGCGGCGGCGCATCGGCAAGTCCCTGGCCGGCCAGTACGACCAGGCCATCCTGCTGCCCAACTCGCTCAAGTCGGCGCTGGTGCCCTTTTTTGCCGGCATTCCCAAACGCTCCGGCTGGCGCGGTGAAATGC > 2:213766/4‑150 GGGAATGCCGGCAAAAAAGGGCACCAGCGCCGACTTGAGCGAGTTGGGCAGCAGGATGGCCTGGTCGTACTGGCCGGCCAGGGACTTGCCGATGCGCCGCCGCGTGGCCAGCTCCAGCGCGCCGTGGCCGAGCGGGAAGCTCAAGGCCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/414491‑414338‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcGCTGGAGCTGGCCACGCGGCGGCGCATCGGCAAGTCCCTGGCCGGCCAGTACGACCAGGCCATCCTGCTGCCCAACTCGCTCAAGTCGGCGCTGGTGCCCTTTTTTGCCGGCATTCCCAAACGCACCGGCTGGCGCGGTGAAATGC > NC_002947/414374‑414519 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |