| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 796307 = | 17 (0.990) | 4 (0.260) | 4/254 | 1.5 | 22.5% | intergenic (+7/‑156) | PP_0680/PP_0681 | ATP‑dependent protease‑like protein/hypothetical protein |
| ? | NC_002947 | 796350 = | 12 (0.770) | intergenic (+50/‑113) | PP_0680/PP_0681 | ATP‑dependent protease‑like protein/hypothetical protein | |||||
GTTCAGCCCGAAACCCTCAGGCTGTTTCCATCCTGAACGCTGTACCGTCCTTAAGTTCCAGCATAGAGGAACAGTACAGAAAGATGGAAAACTGGCGCTGAACGGTAGCACATCGCCGCCAGCGCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/796437‑796307‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccagtttTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACGGTACAGCGTTCAGGATGGAAACAGCCTGAGGGTTTCGGGCTGAACAAGGCTCATTGGAGGGGACGCGGCCATGCGCAACCTCAGCCTCACACGCCAGTGCC > NC_002947/796350‑796493 GTTCAGCCCGAAACCCTCAGGCTGTTTCCATCCTGAACGCTGTACCGTCCTTAAGTTCCAGCATAGAGGAACAGTACAGAAAGATGGAAAACTGGCGCTGAACGGTAGCACATCGCCGCCAGCGCCA > 1:311285/1‑127GTTCAGCCCGAAACCCTCAGGCTGTTTCCATCCTGAACGCTGTACCGTCCTTAAGTTCCAGCATAGAGGAACAGTACAGAAAGATGGAAAACTGGCGCTGAACGGTAGCACATCGCCGCCAGCGCCA < 2:311285/127‑1 CCGAAACCCTCAGGCTGTTTCCATCCTGAACGCTGTACCGTCCTTAAGTTCCAGCATAGAGGAACAGTACAGAAAGATGGAAAACTGGCGCTGAACGGTAGCACATCGCCGCCAGCGCCA > 1:88954/1‑120 CCGAAACCCTCAGGCTGTTTCCATCCTGAACGCTGTACCGTCCTTAAGTTCCAGCATAGAGGAACAGTACAGAAAGATGGAAAACTGGCGCTGAACGGTAGCACATCGCCGCCAGCGCCA < 2:88954/120‑1 ATAGAGGAACAGTACAGAAAGATGGAAAACTGGCGCTGAACGGTAGCACATCGCCGCCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACGGTACAGCGTTCAGGATGGAAACAGCCCGA > 1:188779/1‑141 ATAGAGGAACAGTACAGAAAGATGGAAAACTGGCGCTGAACGGTAGCACATCGCCGCCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACGGTACAGCGTTCAGGATGGAAACAGCCCGA < 2:188779/141‑1 GGAACAGTACAGAAAGATGGAAAACTGGCGCTGAACGGTAGCACATCGCCGCCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACGGTACAGCGTTCAGGATGGAAACAGCCTGAGGGTTTCGGGCTGA > 1:345172/1‑150 GGAAAACTGGCGCTGAACGGTAGCACATCGCCGCCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACGGTACAGCGTTCAGGATGGAAACAGCCTGAGGGTTTCGGGCTGAACAAGGCTCATTGGAGGG < 2:345172/150‑1 CGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACGGTACAGCGTTCAGGATGGAAACAGCCTGAGGGTTTCGGGCTGAACAAGGCTCATTGGAGGGGACGCGGCCATGCGCAACCTCAGCCTCACACGCCAGT < 1:200683/150‑1 CAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACGGTACAGCGTTCAGGATGGAAACAGCCTGAGGGTTTCGGGCTGAACAAGGCTCATTGGAGGGGACGCGGCCATGCGCAACCTCAGCCTCTCACGCCAGTGCC < 1:369576/150‑1 GTTCAGCCCGAAACCCTCAGGCTGTTTCCATCCTGAACGCTGTACCGTCCTTAAGTTCCAGCATAGAGGAACAGTACAGAAAGATGGAAAACTGGCGCTGAACGGTAGCACATCGCCGCCAGCGCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/796437‑796307‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccagtttTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACGGTACAGCGTTCAGGATGGAAACAGCCTGAGGGTTTCGGGCTGAACAAGGCTCATTGGAGGGGACGCGGCCATGCGCAACCTCAGCCTCACACGCCAGTGCC > NC_002947/796350‑796493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |