| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 796307 = | 17 (0.990) | 4 (0.260) | 4/254 | 1.5 | 22.5% | intergenic (+7/‑156) | PP_0680/PP_0681 | ATP‑dependent protease‑like protein/hypothetical protein |
| ? | NC_002947 | 796350 = | 12 (0.770) | intergenic (+50/‑113) | PP_0680/PP_0681 | ATP‑dependent protease‑like protein/hypothetical protein | |||||
GGCTGTTCACCGAGGGCAGCGTCAATGCCCGGGTGGTGGAGCGCCTGCGTGAAATTGCCGAGATGATCAGTGAGGAAGACATCGAGAAGGCAGAAAAGGAACGCCTGGAAGAGGTGATTGCCCAGGCCAAACCGGCCTGAGTCAATAAACTGGCGCTGGCGGCGATGTGCTACCGTTCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACGGTACAGCGTTCAGGATGGAAACAGCCTGAGGGTTTCGGGCTGAACAAGG > NC_002947/796161‑796441 | ggNTGTTCACCGAGGGCAGCGTCAATGNCCGGGTGGTGGANCGCCTGNGNGAAATTGCCGAGATGATCAGTGAGGAAGACATCGAGAAGGCAGAAAAGGAACGCCTGGAAGAGGTGATTGCCCAGGCCAAACCGGCCTGAGTCAATAAAc > 1:297142/1‑150 (MQ=255) gCTGTTCACCGAGGGCAGCGTCAATGCCCGGGTGGTGGAGCCCCTGCGTGAAATTGCCGAGATGATCAGTGAGGAAGACATCGAGAAGGCAGAAAAGGAACGCCTGGAAGAGGTGATTGCCCAGGCCAAACCGGCCTGAGTCAATAAAct < 2:282142/150‑1 (MQ=255) ggcactggcgtgagaggctgaggttgcgcatggccgcgtcccctccaatgagccttgttcagcccgaaaccctcaggctgtttccatcctgaacgctgtaccgtccttaagttccagcatagaggaacagtacagaaagatggaAAActg < 1:369576‑M1/6‑1 (MQ=255) cTGTTCACCGAGGGCAGCGTCAATGCCCGGGTGGTGGAGCGCCTGCGTGAAATTGCCGAGATGATCAGTGAGGAAGACATCGAGAAGGCAGAAAAGGAACGCCTGGAAGAGGTGATTGCCCAGGCCAAACCGGCCTGAGTCAATAAActg < 1:404348/150‑1 (MQ=255) actggcgtgtgaggctgaggttgcgcatggccgcgtcccctccaatgagccttgttcagcccgaaaccctcaggctgtttccatcctgaacgctgtaccgtccttaagttccagcatagaggaacagtacagaaagatggaAAActggcg < 1:200683‑M1/9‑1 (MQ=255) aCCGAGGGCAGCGTCAATGCCCGGGTGGTGGAGCGCCTGCGTGAAATTGCCGAGATGATCAGGGAGGAAGACATCGAGAAGGCAGAAAAGGAACGCCTGGAAGAGGTGATTGCCCAGGCCAAACCGGCCTGAGTCAATAAActggcgctg < 2:173156/150‑1 (MQ=255) ccGGGTGGTGGAGCGCCTGCGTGAAATTGCCGAGATGATCAGTGAGGAAGACATCGAGAAGGCAGAAAAGGAACGCCTGGAAGAGGGGATTGCCCAGGCCAAACCTGCGTGATGCAATAAACTGTCGCTGGCGGCGATGTGCTACCGCTc > 2:191642/1‑150 (MQ=255) gtggAGCGCCTGCGTGAAATTGCCGAGATGATCAGTGAGGAAGACATCGAGAAGGCAGAAAAGGAACGCCTGGAAGAGGTGATTGCCCAGGCCAAACCGGCCTGAGTCAATAAACTGGCGCTGGCGGCGATGTGCTACCGTTCAGCGCCa < 1:41442/150‑1 (MQ=255) tggAGCGCCTGCGTGAAATTGCCGAGATGATCAGTGAGGAAGACATCGAGAAGGCAGAAAAGGAACGCCTGGAAGAGGTGATTGCCCAGGCCAAACCGGCCTGAGTCAATAAACTGGCGCTGGCGGCGATGTGCTACCGTTCAGCGCCAg > 2:168641/1‑150 (MQ=255) ccctccaatgagccttgttcagcccgaaaccctcaggctgtttccatcctgaacgctgtaccgtccttaagttccagcatagaggaacagtacagaaagatggaAAACTGGCGCTGGCGGCGATGTGCTACCGTTCAGCGCCAGTTTTcc < 2:345172‑M1/46‑1 (MQ=255) tcagcccgaaaccctcaggctgtttccatcctgaacgctgtaccgtccttaagttccagcatagaggaacagtacagaaagatggaAAACTGGCGCTGGCGGCGATGTGCTACCGTTCAGCGCCAGTTTTCCATCTTTCTGTACTGTTcc > 1:345172‑M1/87‑150 (MQ=255) tGAGGAAGACATCGAGAAGGCAGAAAAGGAACGCCTGGAAGAGGTGATTGCCCAGGCCAAACCGGCCTGAGTCAATACAGGAAGGCTGGCGGCGATGTGCTACCGTTCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTgg > 1:176511/1‑150 (MQ=255) tcgggctgtttccatcctgaacgctgtaccgtccttaagttccagcatagaggaacagtacagaaagatggaAAACTGGCGCTGGCGGCGATGTGCTACCGTTCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTAt < 2:188779‑M1/69‑1 (MQ=255) tcgggctgtttccatcctgaacgctgtaccgtccttaagttccagcatagaggaacagtacagaaagatggaAAACTGGCGCTGGCGGCGATGTGCTACCGTTCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTAt > 1:188779‑M1/73‑141 (MQ=255) gACATCGAGAAGGCGGAAAAGGAACGCCTGGAAGAGGTGATTGCCCAGGCCAAACCGGCCTGAGTCAATAAACTGGCGCTGGCGGCGATGTGCTACCGTTCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTaa < 1:249989/150‑1 (MQ=255) gACATCGAGAAGGCAGAAAAGGAACGCCTGGAAGAGGTGATTGCTCAGGCCAAACCGGCCTGAGTCAATAAACTGGCGCTGGCGCCGATGTGCTACCGTTCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTan < 2:297142/150‑2 (MQ=255) cATCGAGAAGGCAGAAAAGGAACGCCTGGAAGAGGTGATTGCCCAGGCCAAACCGGCCTGAGTCAATAAACTGGCGCTGGCGGCGATGTGCTACCGTTCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAgg > 2:342456/1‑150 (MQ=255) gagaAGGCAGAAAAGGAACGCCTGGAAGAGGTGATTGCCCAGGCCAAACCGGCCTGAGTCAATAAACTGGCGCTGGCGGCGATGTGCTACCGTACAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACgg < 2:267179/150‑1 (MQ=255) ggAACGCCTGGAAGAGGTGATTGCCCAGGCCAAACCGGCCTGAGTCAATAAACTGGCGCTGGCGGCGATGTGCTACCGTTCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACGGTACAGCGTTCAGGa < 1:168641/150‑1 (MQ=255) gCCTGGAAGAGGTGATTGCCCAGGCCAAACCGGCCTGAGTCAATAAACTGGCGCTGGCGGCGATGTGCTACCGTTCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACGGTACAGCGTTCAGGATGGaa > 1:78512/1‑150 (MQ=255) gTGATTGCCCAGGCCAAACCGGCCTGAGTCAATAAACTGGCGCTGGCGGCGATGTGCTACCGTTCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACGGTACAGCGTTCAGGATGGAAACAGCCTGAgg < 2:176511/150‑1 (MQ=255) aCCGGCCTGAGTCAATAAACTGGCGCTGGCGGCGATGTGCTACCGTTCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACGGTACAGCGTTCAGGATGGAAACAGCCTGAGGGTTTCGGGCTGAACAAg < 2:378921/150‑1 (MQ=255) ccGGCCTGAGTCAATAAACTGGCGCTGGCGGCGATGTGCTACCGTTCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACGGTACAGCGTTCAGGATGGAAACAGCCTGAGGGTTTCGGGCTGAACAAgg < 1:342456/150‑1 (MQ=255) | GGCTGTTCACCGAGGGCAGCGTCAATGCCCGGGTGGTGGAGCGCCTGCGTGAAATTGCCGAGATGATCAGTGAGGAAGACATCGAGAAGGCAGAAAAGGAACGCCTGGAAGAGGTGATTGCCCAGGCCAAACCGGCCTGAGTCAATAAACTGGCGCTGGCGGCGATGTGCTACCGTTCAGCGCCAGTTTTCCATCTTTCTGTACTGTTCCTCTATGCTGGAACTTAAGGACGGTACAGCGTTCAGGATGGAAACAGCCTGAGGGTTTCGGGCTGAACAAGG > NC_002947/796161‑796441 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |