| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2489400 = | 10 (0.580) | 4 (0.240) | 4/268 | 1.6 | 28.9% | coding (354/1578 nt) | PP_2184 | formate dehydrogenase subunit beta |
| ? | NC_002947 | 2489439 = | 10 (0.600) | coding (393/1578 nt) | PP_2184 | formate dehydrogenase subunit beta | |||||
AGTCGAGTACTGCGGCAACCACTTCGGCACCGTCCAGCGCCACAGCGGCCTCCAGGCCTGCGAAACCGCCGTTGGCGCGATAGTCGTCCAGCGACAATGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2489503‑2489400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggTTTCGCAGGCCTGGAGGCCGCTGTGGCGCTGGACGGTGCCGAAGTGGTTGCCGCAGTACTCGACTCCGGCCTGCGTGGCCGTGGTGGTGCGGCGTTCCCGGCCGGCATCAAGTGGC > NC_002947/2489439‑2489554 AGTCGAGTACTGCGGCAACCACTTCGGCACCGTCCAGCGCCACAGCGGCCTCCAGGCCTGCGAAACCGCCGTTGGCGCGATAGTCGTCCAGCGACAATGGGCGG < 1:149726/104‑1AGTCGAGTACTGCGGCAACCACTTCGGCACCGTCCAGCGCCACAGCGGCCTCCAGGCCTGCGAAACCGCCGTTGGCGCGATAGTCGTCCAGCGACAATGGGCGG > 2:149726/1‑104 CTCCAGGCCTGCGAAACCGCCGTTGGCGCGATAGTCGTCCAGCGACAATGGGCGGTTTCGCAGGCCTGGAGGCCGCTGTGGCGCTGGACGGTGCCGAAGTGGTTGCCGCAGTACTCGACTCCGGCCTGCGTGGCCGTGGTGGTGCGGC < 1:189265/148‑1 CTCCAGGCCTGCGAAACCGCCGTTGGCGCGATAGTCGTCCAGCGACAATGGGCGGTTTCGCAGGCCTGGAGGCCGCTGTGGCGCTGGACGGTGCCGAAGTGGTTGCCGCAGTACTCGACTCCGGCCTGCGTGGCCGTGGTGGTGCGGC > 2:189265/1‑148 CGCCGTTGGCGCGATAGTCGTCCAGCGACAATGGGCGGTTTCGCAGGCCTGGAGGCCGCTGTGGCGCTGGACGGTGCCGAAGTGGTTGCCGCAGTACTCGACTCCGGCCTGCGTGGCCGTGGTGGTGCGGCGTTCCCGGCCGGCATCAAG > 1:232261/1‑150 GTTGGCGCGATAGTCGTCCAGCGACAATGGGCGGTTTCGCAGGCCTGGAGGCCGCTGTGGCGCTGGACGGTGCCGAAGTGGTTGCCGCAGTACTCGACTCCGGCCTGCGTGGCCGTGGTGGTGCGGCGTTCCCGGCCGGCATCAAGTGGC < 2:232261/150‑1 AGTCGAGTACTGCGGCAACCACTTCGGCACCGTCCAGCGCCACAGCGGCCTCCAGGCCTGCGAAACCGCCGTTGGCGCGATAGTCGTCCAGCGACAATGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2489503‑2489400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggTTTCGCAGGCCTGGAGGCCGCTGTGGCGCTGGACGGTGCCGAAGTGGTTGCCGCAGTACTCGACTCCGGCCTGCGTGGCCGTGGTGGTGCGGCGTTCCCGGCCGGCATCAAGTGGC > NC_002947/2489439‑2489554 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |