New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2489400 = | 10 (0.580) | 4 (0.240) | 4/268 | 1.6 | 28.9% | coding (354/1578 nt) | PP_2184 | formate dehydrogenase subunit beta |
? | NC_002947 | 2489439 = | 10 (0.600) | coding (393/1578 nt) | PP_2184 | formate dehydrogenase subunit beta |
TACGCCACACGATGTGCCATCACTGCTTGATGCCCTGGCGGGCGAACCCGGTG‑GCCACTCGCTGGCACTGGGGCCGGTCGAAGAAATACCCTATCTCAAGACCCAGCAACGCTTGCTGTTCGCTCGCGCTGGCATTACCCGCCCATTGTCGCTGGACGACTATCGCGCCAACGGCGGTTTCGCAGGCCTGGAGGCCGCTGTGGCGCTGGACGGTGCCGAAGTGGTTGCCGCAGTACTCGACTCCGGCCTGCGT > NC_002947/2489262‑2489514 | tACGCCACACGATGTGCCATCACTGCTTGATGCCCTGGC‑GCCTATCTGGGAGCACGTCTCGCTGGCACTGGGGCCGGTCGAAGAAATACCCTATCTCAAGACCCAGCAACGCTTGCTGTTCGCTCGCGCTGGCATTACCCGCCCATTGTc < 2:116581/150‑1 (MQ=255) gATGTGCCATCACTGCTTGATGCCCTGGCGGGCGAACCCGGTG‑GCCACTCGCTGGCACTGGGGCCGGTCGAAGAAATACCCTATCTCAAGACCCAGCAACGCTTGCTGTTCGCTCGCGCTGGCATTACCCGCCCATTGTCGCTGgacgac > 1:31731/1‑150 (MQ=255) gccacttgatgccggccgggaacgccgcaccaccacggccacgcaggccggagtcgagtactgcggcaaccacttcggcaccgtccagcgccacagcggcctccaggcctgcgaaaCCGCCCATTGTCGCTGGACGACTATCGCGCCAAc < 2:232261‑M1/34‑1 (MQ=255) ttGATGCCCTGGCGGGCGAACCCGGTG‑GCCACTCGCTGGTACTGGTGCGGGTCGAAGAAATACGCTATCTCAAGACCCAGCAACGCTTGCTGTTCGCTCGCGCTGGCATTACCCGCCCATTGTCGCTGGACGACTATCGCGCCAAcggcg > 2:184761/1‑150 (MQ=255) cttgatgccggccgggaacgccgcaccaccacggccacgcaggccggagtcgagtactgcggcaaccacttcggcaccgtccagcgccacagcggcctccaggcctgcgaaaCCGCCCATTGTCGCTGGACGACTATCGCGCCAAcggcg > 1:232261‑M1/113‑150 (MQ=255) gccgcaccaccacggccacgcaggccggagtcgagtactgcggcaaccacttcggcaccgtccagcgccacagcggcctccaggcctgcgaaaCCGCCCATTGTCGCTGGACGACTATCGCGCCAACGGCGGTTTCGCAGGCCTGGAg < 1:189265‑M1/55‑1 (MQ=255) gccgcaccaccacggccacgcaggccggagtcgagtactgcggcaaccacttcggcaccgtccagcgccacagcggcctccaggcctgcgaaaCCGCCCATTGTCGCTGGACGACTATCGCGCCAACGGCGGTTTCGCAGGCCTGGAg > 2:189265‑M1/94‑148 (MQ=255) cGGTG‑GCCACTCGCTGGCACTGGGGCCGGTCGAAGAAATACCCTATCTCAAGACCCAGCAACGCTTGCTTTTCGCTCGCGCTGGCATTACCCGCCCATTGTCGCTGGACGACTATCGCGCCAACGGCGGTTTCGCAGGCCTGGAGGCCGc > 1:115251/1‑150 (MQ=255) ggTG‑GCCGCTCGCTGGCACTGGGGTGTGGCGAAGAAATACCCTATCTCAAGACCCGGCAACGCTTGCTGTTCGCTCGCGCTGGCATTACCCGCCCGTTGTCGCTGGACGACTATCGCGCCAACGGCGGTTTCGCAGGCCTGGAGGCCGCt < 2:879/150‑1 (MQ=255) ggCACTGGGGCCGGTCGAAGAAATACCCTATCTCAAGACCCAGCAACGCTTGCTGTTCGCTCGCGCTGGCATTACCCGCCCATTGTCGCTGGACGACTATCGCGCCAACGGCGGTTTCGCAGGCCTGGAGGCCGCTGTGGCGCTGGACgg < 2:31731/150‑1 (MQ=255) gaaATACCCTATCTCAAGACCCAGCAACGCTTGCTTTTCGCTCGCGCTGGCATTACCCGCCCATTGTCGCTGGACGACTATCGCGCCAACGGCGGTTTCGCAGGCCTGGAGGCCGCTGTGGCGCTGGACGGTGCCGAAGTGGTTGCCGCa < 2:115251/150‑1 (MQ=255) aTCTCAAGAACCAGCAACGCTTGCTGTTCGCTCGCGCTGGCATTACCCGCCCATTGTCGCTGGACGACTATCGCGCCAACGGCGGTTTCGCAGGCCTGGAGGCCGCTGTGGCGCTGGACGGTGCCGAAGTGGTTGCCGCAGTACTCGACt < 1:123680/150‑1 (MQ=255) tctcAAGACCCAGCAACGCTTGCTGTTCGCTCGCGCTGGCATTACCCGCCCATTGTCGCTGGACGACTATCGCGCCAACGGCGGTTTCGCAGGCCTGGAGGTCGCTGTGGCGCTGGACGGTGGCGAAGTGGTTGCCGCAGTACTTGACTc > 2:398526/1‑150 (MQ=255) cAGCAACGCTTGCTGTTCGCTCGCGCTGGCATTACCCGCCCATTGTCGCTGGACGACTATCGCGCCAACGGCGGTTTCGCAGGCCTGGAGGCCGCTGTGGCGCTGGACGGTGCCGAAGTGGTTGCCGCAGTACTCGACTCCGGCCTGCGt > 2:177499/1‑150 (MQ=255) CCGCCCATTGTCGCTGGACGACTATCGCGCCAACGGCGGTTTCGCAGGCCTGGAGGCCGCTGTGGCGCTGGACGGTGCCGAAGTGGTTGCCGCAGTACTCGACt < 1:149726‑M1/104‑1 (MQ=255) CCGCCCATTGTCGCTGGACGACTATCGCGCCAACGGCGGTTTCGCAGGCCTGGAGGCCGCTGTGGCGCTGGACGGTGCCGAAGTGGTTGCCGCAGTACTCGACt > 2:149726‑M1/1‑104 (MQ=255) | TACGCCACACGATGTGCCATCACTGCTTGATGCCCTGGCGGGCGAACCCGGTG‑GCCACTCGCTGGCACTGGGGCCGGTCGAAGAAATACCCTATCTCAAGACCCAGCAACGCTTGCTGTTCGCTCGCGCTGGCATTACCCGCCCATTGTCGCTGGACGACTATCGCGCCAACGGCGGTTTCGCAGGCCTGGAGGCCGCTGTGGCGCTGGACGGTGCCGAAGTGGTTGCCGCAGTACTCGACTCCGGCCTGCGT > NC_002947/2489262‑2489514 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |