| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 718459 | 33 (1.040) | 8 (0.300) | 6/228 | 2.6 | 21.3% | intergenic (+26/+51) | thiO/PP_0613 | FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein |
| ? | NC_002947 | = 718465 | 31 (1.140) | intergenic (+32/+45) | thiO/PP_0613 | FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein | |||||
TGGCTGAACTGCGGGCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/718299‑718459‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggtaaacccgctcGCGTAGGAGCGGGTTTACCCGCGAAGAGGTCCTCAGCCCAAACGCCCTTCTGGCGCATACGGCGCCGGGTCGATAATCGGCTCGGCCCCTGTCAGCAAATCGGTAAACAGCTGGCACGAAGCCGGCGCCAGCACCAGCCCA < NC_002947/718465‑718325 TGGCTGAACTGCGGGCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGG < 1:733338/150‑1 GCTGAACTGCGGGCATTATCGCAATGGGCTGGTGATGGGGAAGGGCTGGTTTCAGCTGTTTACCGATTTGCGTACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGTCGTTTGGGCTGAGGACCTCTTCGCGGGTA > 1:541145/1‑150 GAACTGCGGGCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAAC < 2:161886/150‑1 GAACTGCGGGCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGG < 2:627362/144‑1 GAACTGCGGGCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGG > 1:627362/1‑144 TGCGGGCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGCGCCGATTATCGACCCGGCGCCGTATCCGCCAGAAGGGCTTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGC < 1:419272/150‑1 GGCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTTGTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCGC > 1:187796/1‑150 AATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTCCAGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCT‑TTCGCGGGTAAACCCGCTCGCGTAGGAGCGGGT < 1:177427/150‑1 ATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCGCGTAGGAGCGGGT < 2:190872/150‑1 ATGGGCTGGTGCTGGCGCCGGCTTCCTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCGCGTAGGAGCGGGT < 2:187796/150‑1 TTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC < 1:269708/114‑1 TTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGACGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC > 2:269708/1‑114 GATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCGCGTAGGAGCGGGTTTACCC > 2:699253/1‑92 GATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCGCGTAGGAGCGGGTTTACCC < 1:699253/92‑1 GCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCGCGTAGGAGCGGGTTTAC > 1:436537/1‑66 GCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCGCGTAGGAGCGGGTTTAC < 2:436537/66‑1 GCGGGTAAACCCGCTCGCGTAGGAGCGGGTTTACCCGCGAAGAGGTCCTCAGCCCAAACGCCCTTCTGGCGCATACGGCGCCGGGTC < 2:245559/87‑1 GCGGGTAAACCCGCTCGCGTAGGAGCGGGTTTACCCGCGAAGAGGTCCTCAGCCCAAACGCCCTTCTGGCGCATACGGCGCCGGGTC > 1:245559/1‑87 AACCCGCTCGCGTAGGAGCGGGTTTACCCGCGAAGAGGTCCTCAGCCCAAACGCCCTTCTGGCGCATACGGCGCCGGGTCGATAATCGGCTCGGCCCCTGTCAGCAAATCGGTAAACAGCTGGCACGAAGCCGGCGCCAGCACCAGCCCA > 1:339929/1‑150 TGGCTGAACTGCGGGCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/718299‑718459‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggtaaacccgctcGCGTAGGAGCGGGTTTACCCGCGAAGAGGTCCTCAGCCCAAACGCCCTTCTGGCGCATACGGCGCCGGGTCGATAATCGGCTCGGCCCCTGTCAGCAAATCGGTAAACAGCTGGCACGAAGCCGGCGCCAGCACCAGCCCA < NC_002947/718465‑718325 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |