| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 718459 | 33 (1.040) | 8 (0.300) | 6/228 | 2.6 | 21.3% | intergenic (+26/+51) | thiO/PP_0613 | FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein |
| ? | NC_002947 | = 718465 | 31 (1.140) | intergenic (+32/+45) | thiO/PP_0613 | FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein | |||||
GGCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGCCCGGC > NC_002947/718312‑718605 | ggCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTTGTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgc > 1:187796‑M1/1‑148 (MQ=255)ggCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGGGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGGAACCCCGCTCCt > 1:56115/1‑150 (MQ=255) gCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGGAAACCCGCTCCTa > 1:527222/1‑150 (MQ=255) cATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTAc < 2:541145/150‑1 (MQ=255) aTTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTAcg > 2:798652/1‑150 (MQ=255) aaTGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTCCAGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCT‑TTCGCGGGTAAACCCGCTCgcgtaggagcgggt < 1:177427‑M1/150‑15 (MQ=255) aTGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgggt < 2:190872‑M1/150‑15 (MQ=255) aTGGGCTGGTGCTGGCGCCGGCTTCCTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgggt < 2:187796‑M1/150‑15 (MQ=255) tGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCgagcgggtt > 1:339929‑M2/1‑141 (MQ=255) cTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAg > 1:523639/1‑150 (MQ=255) ttCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC < 1:269708‑M1/114‑1 (MQ=255) ttCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCCGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCAGCAGa > 1:336951/1‑150 (MQ=255) ttCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGACGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTC > 2:269708‑M1/1‑114 (MQ=255) ccAGCTGTTTACCGATTTGCTGACCGGGGCCTAGCCGATTATCTACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGATGACTTCTTAGCGGGTAAACCCGCTCCTACGCGAGCTGGTTTACCCGCGAAAGGGCCGCAGAAGCCaa < 2:336951/150‑1 (MQ=255) aGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCAGCTTCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATa > 1:490154/1‑150 (MQ=255) cTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACa < 1:685175/150‑1 (MQ=255) tttGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCa < 1:495679/150‑1 (MQ=255) gtggggACAGGGGCCCAGCCGAGTATCGCCCCGGCGCCGTATGCGCCAGGAGAGCGTTTGGGCTGAGGCCCTCTTCGCGGGTATACCCCCTCCCAGGCGAGCGGGTGTACCCGCGAAAGGGACGCAGAAGCCAATACAGATTTCAGCCAg < 1:479905/145‑1 (MQ=255) gACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATc < 1:798652/150‑1 (MQ=255) gagccgaTTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCa > 2:175995/1‑150 (MQ=255) gaTTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgggtttaccc > 2:699253‑M1/1‑72 (MQ=255) gaTTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgggtttaccc < 1:699253‑M1/92‑21 (MQ=255) gACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCgagcgggtttacccgc < 2:245559‑M2/87‑17 (MQ=255) gACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCgagcgggtttacccgc > 1:245559‑M2/1‑71 (MQ=255) cccGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGa > 2:642325/1‑150 (MQ=255) ccGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAAtgct > 1:134522/1‑150 (MQ=255) gcCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgggtttac > 1:436537‑M1/1‑48 (MQ=255) gcCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCgcgtaggagcgggtttac < 2:436537‑M1/66‑19 (MQ=255) cAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATacac < 1:297435/150‑1 (MQ=255) gAAGGGCGTTTGGGCTGAGGATCGCTTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCt < 1:642325/150‑1 (MQ=255) gAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCt < 1:175995/150‑1 (MQ=255) tttGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACAcc > 1:689769/1‑150 (MQ=255) tGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCg < 2:523639/150‑1 (MQ=255) cTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCgcagc > 1:419760/1‑150 (MQ=255) aCCTATTCGCGGGTACACCCGCAGGTACGCGGGCTGTGGTTCTCGCTAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGc < 2:490154/150‑1 (MQ=255) ctctTCGCGGGTAAACCCGCTGCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAAt > 2:99012/1‑84 (MQ=255) ctctTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAAt < 1:99012/84‑1 (MQ=255) gcgGGTAAACCCGCTCgcgtaggagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggcgcatacggcgccgggtc < 2:245559‑M1/87‑72 (MQ=255) gcgGGTAAACCCGCTCgcgtaggagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggcgcatacggcgccgggtc > 1:245559‑M1/1‑16 (MQ=255) gggTAAACCCGCTCCTACGCgagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggcgcatacggcgccgggtcgataatc > 2:699253‑M2/1‑20 (MQ=255) gggTAAACCCGCTCCTACGCgagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggcgcatacggcgccgggtcgataatc < 1:699253‑M2/92‑73 (MQ=255) gTAAACCCGCTCCTACGCgagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggc < 2:436537‑M2/66‑49 (MQ=255) gTAAACCCGCTCCTACGCgagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggc > 1:436537‑M2/1‑18 (MQ=255) aaCCCGCTCgcgtaggagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggcgcatacggcgccgggtcgataatcggctcggcccctgtcagcaaatcggtaaacagctggcacgaagccggcgccagcaccagccca > 1:339929‑M1/1‑9 (MQ=255) aaCCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCt < 2:37993/78‑1 (MQ=255) aaCCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCt > 1:37993/1‑78 (MQ=255) aCCCGCTCCTACGCgagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggcgcatacggcgccgggtcgataatcggctcggcccctgtcagcaaatcggtaaacagctggcaggaagccggcgccagcaccagcccat < 2:187796‑M2/150‑137 (MQ=255) aCCCGCTCCTACGCgagcgggtttacccgcgaagaggtcctcagcccaaacgcccttctggcgcatacggcgccgggtcgataatcggctcggcccctgtcagcaaatcggtaaacagctggcacgaagccggcgccagcaccagcccat < 2:190872‑M2/150‑137 (MQ=255) aCCCGCTCCTACGCgagcgggtttacccgcgaaaggtcctcagcccaaacgcccttctggcgcatacggcgccgggtcgataatcggctcggcccctgtctggaaatcggtaaacagctggcacgaagccggcgccagcaccagcccatt < 1:177427‑M2/150‑137 (MQ=255) cccGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGccc > 1:788500/1‑150 (MQ=255) cccGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGccc > 2:166591/1‑150 (MQ=255) ccGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGa > 2:443491/1‑93 (MQ=255) ccGCCCCTACGCGAGCGGGTTTACCCGTGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGa < 1:443491/93‑1 (MQ=255) gCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCtcat > 1:329353/1‑134 (MQ=255) gCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCtcat < 2:329353/134‑1 (MQ=255) gCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGCCCGGc > 2:131541/1‑150 (MQ=255) | GGCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGCGGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGCCCGGC > NC_002947/718312‑718605 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |