New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1899260 =	35 (1.110)	8 (0.290)	7/236	2.4	23.5%	intergenic (+288/‑232)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	1899320 =	21 (0.750)					intergenic (+348/‑172)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase

ACGGCGCCTTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1899423‑1899260 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCC  >  NC_002947/1899320‑1899457                                                                                                                                                                                                                                                                                                                ACGGCGCCTTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTAC                                                                                                                                                          <  1:529546/150‑1     CGCCTTTGTCGTGAAGTGGTGAGGGCTGTCAACGTTGACAGCCCGGGATGAGGTAGATCAGTAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCACTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGT                                                                                                                                                      <  1:661007/150‑1             TCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGG                                                                                                                                              <  1:311846/150‑1                                                                                 CTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGC                                                                                                                                                <  1:49621/80‑1                                                                                 CTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGC                                                                                                                                                >  2:49621/1‑80                                                                                                               TCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAA                                            >  2:300296/1‑150                                                                                                                  CACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAC                                                                                            >  1:523422/1‑99                                                                                                                  CACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAC                                                                                            <  2:523422/99‑1                                                                                                                       GGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGT                                    <  1:300296/150‑1                                                                                                                                AAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCG                           >  2:196433/1‑150                                                                                                                                AAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCAT                                                                                                           >  1:104352/1‑70                                                                                                                                AAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCAT                                                                                                           <  2:104352/70‑1                                                                                                                                           GCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGC                <  1:196433/150‑1                                                                                                                                                       CTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCGCCGCTTGCATCAGCATGCCGGGGCAG    >  2:377047/1‑150                                                                                                                                                         cctttcGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCC  >  1:739479/7‑150                                                                                                                                                         GTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCC  <  2:40220/150‑1                                                                                                                                                                                                                                                                                                                ACGGCGCCTTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1899423‑1899260 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCC  >  NC_002947/1899320‑1899457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.