| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6032808 = | 31 (0.980) | 8 (0.340) | 10/200 | 1.3 | 28.4% | intergenic (+16/+120) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein |
| ? | NC_002947 | 6032890 = | 17 (0.720) | intergenic (+98/+38) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein | |||||
ATCATCATTGGTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6032987‑6032808‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACGACA > NC_002947/6032890‑6033037 ATCATCATTGGTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGC > 1:273867/1‑150 TGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAG > 2:249919/1‑150 TGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTAC‑GGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGG > 2:159163/1‑150 GATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGG > 2:418481/1‑150 GGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCT > 2:715336/1‑140 GGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCT < 1:715336/140‑1 AGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGT < 1:249919/150‑1 TGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCC < 2:418234/150‑1 ATGGTCTAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTA < 2:187142/130‑1 ATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTA > 1:187142/1‑130 TGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAA < 1:467782/150‑1 AGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTAC‑GGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCG < 1:159163/150‑1 AGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATC > 2:467421/1‑110 AGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATC < 1:467421/110‑1 GTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCA < 1:592775/85‑1 GTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCA > 2:592775/1‑85 GCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGAT > 1:185848/1‑150 cacctcCCAGGCGGGCGCGACCGCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGA < 2:185848/144‑1 GGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCA < 2:467782/150‑1 GGTTTACCCGCGAAAGGGCCAGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCC > 1:24888/1‑150 GTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAAT > 1:691753/1‑63 GTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAAT < 2:691753/63‑1 CCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACTCCTGGCCCCGCTTCAA < 2:794427/150‑1 CCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAA > 2:313081/1‑150 CCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAA > 1:551465/1‑150 CCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAAT > 1:768783/1‑129 CCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAAT < 2:768783/129‑1 AAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACGACA < 1:250997/150‑1 ATCATCATTGGTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6032987‑6032808‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACGACA > NC_002947/6032890‑6033037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |