| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 97899 | 85 (1.160) | 7 (0.100) | 6/236 | NT | 7.9% | coding (122/414 nt) | PP_0091 | putative lipoprotein |
| ? | NC_002947 | = 97914 | 83 (1.200) | coding (107/414 nt) | PP_0091 | putative lipoprotein | |||||
GGTCAGGTAGCAGGTTCGGTCCCTGGGTTGTGACATGAGGCCGCCCGAGTAGATTTCATAATCGAAGCGCACCACCAGTTCATGCTTGCCCGGTGTCACCTGAAAGTACCGGCCATCGTCCAGGCGCTTGCCGTCGAGGCGGTCGGCCATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/97748‑97899‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatga‑CCCCCGGTCGGGTGATCATGGCCGACCGCCTCGACGGCAAGCGCCTGGACGATGGCCGGTACTTTCAGGTGACACCGGGCAAGCATGAACTGGTGGTGCGCTTCGATTATGAAATCTACTCGGGCGGCCTCATGTCACAACCCAGGGA < NC_002947/97914‑97767 GGTCAGGTAGCAGGTTCGGTCCCTGGGTTGTGACATGAGGCCGCCCGAGTAGATTTCATAATCGAAGCGCACCACCAGTTCATGCTTGCCCGGTGTCACCTGAAAGTACCGGCCATCGTCCAGGCGCTTGCCGTCGAGGCGGTCGGCCAT < 1:1270045/150‑1 GTCAGGTAGCAGGTTCGGTCCCTGGGTTGTGACATGAGGCCGCCCGAGTAGATTTCATAATCGAAGCGCACCACCAGTTCATGCTTGCCCGGTGTCACCTGAAAGTACCGGCCATCGTCCAGGCGCTTGCCGTCGAGGCGGTCGGCCATG < 2:1353229/150‑1 TCAGGTAGCAGGTTCGGTCACTGGGTTGTGACATGAGGCCGCCCGAGTAGATTTCATAATCGAAGCGCACCACCAGTTCATGCTTGCCCGGTGTCACCTGAAAGTACCGGCCATCGTCCAGGCGCTTGCCGTCGAGGCGGTCGGCCATGA > 1:263843/1‑150 GTAGCAGGTTCGGTCCCTGGGTTGTGACATGAGGCCGCCCGAGTAGATTTCATAATCGAAGCGCACCACCAGTTCATGCTTGCCCGGTGTCACCTGAAAGTACCGGCCATCGTCCAGGCGCTTGCCGTCGAGGCGGTCGACCATGA‑CCCC > 2:1895725/1‑150 GGGTTGTGACATGAGGCCGCCCGAGTAGATTTCATAATCGAAGCGCACCACCAGTTCATGCTTGCCCGGTGTCACCTGAAAGTACCGGCCATCGTCCAGGCGCTTGCCGTCGAGGCGGTCGACCATGA‑CCCCCGGTCGGGTGATCATGGC < 1:1895725/150‑1 ACATGAGGCCGCCCGAGTAGATTTCATAATCGAAGCGCACCACCAGTTCATGCTTGCCCAGTGTCACCTGAAAGTACCGGCCATCGTCCAGGCGCTTGCCGTCGAGGCGGTCGGCCATGA‑CCCCCGGTCGGGTGATCATG < 1:1764986/140‑1 ACATGAGGCCGCCCGAGTAGATTTCATAATCGAAGCGCACCACCAGTTCATGCTTGCCCAGTGTCACCTGAAAGTACCGGCCATCGTCCAGGCGCTTGCCGTCGAGGCGGTCGGCCATGA‑CCCCCGGTCGGGTGATCATG > 2:1764986/1‑140 CACCTGAAAGTACCGGCCATCGTCCAGGCGCTTGCCGTCGAGGCGGTCGGCCATGA‑CCCCCGGTCGGGTGATCATG > 1:132025/1‑76 CACCTGAAAGTACCGGCCATCGTCCAGGCGCTTGCCGTCGAGGCGGTCGGCCATGA‑CCCCCGGTCGGGTGATCATG < 2:132025/76‑1 CGTCGAGGCGGTCGGCCATGATCACCCGACCGGGGG‑TCATGGCCGACCGCCTCGACGGCAAGCGCCTGGACGATGGCCGGTACTTTCAGGTGACACCGGGCAAGCATGAACTGGTGGTGCGCTTCGATTATG > 1:464901/1‑132 CGTCGAGGCGGTCGGCCATGA‑TCACCCGACCGGGGGTCATGGCCGACCGCCTCGACGGCAAGCGCCTGGACGATGGCCGGTACTTTCAGGTGACACCGGGCAAGCATGAACTGGTGGTGCGCTTCGATTATG < 2:464901/132‑1 CCATGA‑CCCCCGGTCGGGTGATCATGGCCGACCGCCTCGACGGGAAGCGCCTGGACGATGGCCGGTACTTTCAGGTGACACCGGGCAAGCATGAACTGGTGGTGCGCTTCGATTATGAAATCTACTCGGGCGGCCTCATGTCACAACCCA > 2:1404886/1‑150 CCATGA‑CCCCCGGTCGGGTGATCATGGCCGACCGCCTCGACGGCAAGCGCCTGGACGATGGCCGGTACTTTCAGGTGACACCGGGCAAGCATGAACTGGTGGTGCGC < 1:660786/107‑1 CCATGA‑CCCCCGGTCGGGTGATCATGGCCGACCGCCTCGACGGCAAGCGCCTGGACGATGGCCGGTACTTTCAGGTGACACCGGGCAAGCATGAACTGGTGGTGCGC > 2:660786/1‑107 CATGA‑CCCCCGGTCGGGTGATCATGGCCGACCGCCTCGACGGCAAGCGCCTGGACGATGGCCGGTACTTTCAGGTGACACCGGGCAAGCATGAACTGGTGGTGCGCTTCGATTATGAAATCTACTCGGGCGGCCTCATGTCACAACCCAG < 1:1525119/150‑1 CATGA‑CCCCCGGTCGGGTGATCATGGCCGACCGCCTCGACGGCAAGCGCCTGGACGATGGCCGGTACTTTCAGGTGACACCGGGCAAGCATGAACTGGCGGTGCGCTTCGATTATGAAATCTACTCGGGCGGCCTCATGTCACAACCCAG > 2:914435/1‑150 ATGA‑CCCCCGGTCGGGTGATCATGGCCGACCGCCTCGACGGCAAGCGCCTGGACGATGGCCGGTACTTTCAGGTGACACCGGGCAAGCATGAACTGGTGGTGCGCTTCGATTATGAAATCTA > 1:812288/1‑122 ATGA‑CCCCCGGTCGGGTGATCATGGCCGACCGCCTCGACGGCAAGCGCCTGGACGATGGCCGGTACTTTCAGGTGACACCGGGCAAGCATGAACTGGTGGTGCGCTTCGATTATGAAATCTA < 2:812288/122‑1 GA‑CCCCCGGTCGGGTGATCATGGCCGACCGCCTCGACGGCAAGCGCCTGGACGATGGCCGGTACTTTCAGGTGACACCGGGCAAGCATGAACTGGTGGTGCGCTTCGATTATGAAATCTACTCGGGCGGCCTCATGTCACAACCCAGGGA > 1:344299/1‑150 GA‑CCCCCGGTCGGGTGATCATGGCCGACCGCCTCGACGGCAAGCGCCTGGACGATGGCCGGTACTTTCAGGTGACACCGGGCAAGCATGAACTGGTGGTGCGCTTCGATTATGAAATCTACTCGGGCGGCCTCATGTCACAACCCAGGGA > 2:226271/1‑150 GGTCAGGTAGCAGGTTCGGTCCCTGGGTTGTGACATGAGGCCGCCCGAGTAGATTTCATAATCGAAGCGCACCACCAGTTCATGCTTGCCCGGTGTCACCTGAAAGTACCGGCCATCGTCCAGGCGCTTGCCGTCGAGGCGGTCGGCCATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/97748‑97899‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatga‑CCCCCGGTCGGGTGATCATGGCCGACCGCCTCGACGGCAAGCGCCTGGACGATGGCCGGTACTTTCAGGTGACACCGGGCAAGCATGAACTGGTGGTGCGCTTCGATTATGAAATCTACTCGGGCGGCCTCATGTCACAACCCAGGGA < NC_002947/97914‑97767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |