| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 158799 | 92 (1.260) | 7 (0.100) | 7/234 | NT | 7.2% | coding (1590/1956 nt) | PP_0149 | hypothetical protein |
| ? | NC_002947 | = 158816 | 94 (1.370) | coding (1573/1956 nt) | PP_0149 | hypothetical protein | |||||
GTAGCCTTTGGAATCGAGCAACTCTGCCGGGCGGCTGAGAAAACCGCTGTTGGCAAGCATTTGCTTGAGCGTGGCATCGGCTTTGTTGATGCTGCCATCCTTCAAGGCTGCGGCATTCAGGTAACGCTGCTTGACCTCGTCCTGGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/158649‑158799‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcCTGCGCCGGCAGCTTCTGCTGGCCCAGGACGAGGTCAAGCAGCGTTACCTGAATGCCGCAGCCTTGAAGGATGGCAGCATCAACAAAGCCGATGCCACGCTCAAGCAAATGCTTGCCAACAGCGGTTTTCTCAGCCGCCCGGCAGA < NC_002947/158816‑158671 GTAGCCTTTGGAATCGAGCAACTCTGCCGGGCGGCTGAGAAAACCGCTGTTGGCAAGCATTTGCTTGAGCGTGGCATCGGCTTTGTTGATGCTGCCATCCTTCAAGGCTGCGGCATTCAGGTAACGCTGCTTGACCTCGTCCTGGGCCAG > 2:1821842/1‑150 TAGCCTTTGGAATCGAGCAACTCTGCCGGGCGGCTGAGAAAACCGCTGTTGGCAAGCATTTGCTTGAGCGTGGCATCGGCTTTGTTGATGCTGCCATCCTTCAAGGCTGCGGCATTCAGGTAACGCTGCTTGACCTCGTCCTGGGCCAGC < 2:1151398/150‑1 GAGCAACTCTGCCGGGCGGCTGAGAAAACCGCTGTTGGCAAGCATTTGCTTGAGCGTGGCATCGGCTTTGTTGATGCTGCCATCCTTCAAGGCTGCGGCATTCAGGTAACGCTGCTTGACCTCGTCCT‑GGCCAGCCTGCGCCGGCAGCTT > 1:1448756/1‑150 CTCTGCCGGGCGGCTGAGAAAACCGCTGTTGGCAAGCATTTGCTTGAGCGTGGCATCGGCTTTGTTGATGCTGCCATCCTTCAAGGCTGCGGCATTCAGGCAACGCTGCTTGACCTCGTCCTGG < 1:386255/124‑1 CTCTGCCGGGCGGCTGAGAAAACCGCTGTTGGCAAGCATTTGCTTGAGCGTGGCATCGGCTTTGTTGATGCTGCCATCCTTCAAGGCTGCGGCATTCAGGCAACGCTGCTTGACCTCGTCCTGG > 2:386255/1‑124 GAGAAAACCGCTGTTGGCAAGCATTTGCTTGAGCGTGGCATCGGCTTTGTTGATGCTGCCATCCTTCAAGGCTGCGGCATTCAGGTAACGCTGCTTGAAC‑‑‑‑‑‑‑AGGCCAGCCTGCGCCGGCAGCTTCTGCTGGCCCAGGACGAGGTCAAGCAG < 2:470989/150‑1 CATTTGCTTGAGCGTGGCATCGGCTTTGTTGATGCTGCCATCCTTCAAGGCTGCGGCATTCAGGTAACGCTGCTTGACCTCGTCCT‑GGCCAGCCTGCGCCGGCAGCTTCTGCTGGCCCAGGACGAGGTCAAGCAGCGTTACCTGAATGCC < 2:1448756/150‑1 TGCGGCATTCAGGTAACGCTGCTTGACCTCGTCCTGGGCCAGCCTGCGCCGGCAGCTTC > 1:718240/1‑59 TGCGGCATTCAGGTAACGCTGCTTGACCTCGTCCTGGGCCAGCCTGCGCCGGCAGCTTC < 2:718240/59‑1 TCGTCCTGGGCCAGCCTGCGCCGGCAGCTTCTGCTGGCCCAGGACGAGGTCAAGCAGCGTTACCTGAATGCCGCAGCCTTGAAGGATGGCAGCATCAACAAAGCCGATGCCACGCTCAAGCAAATGCTT > 1:607019/1‑129 TCGTCCTGGGCCAGCCTGCGCCGGCAGCTTCTGCTGGCCCAGGACGAGGTCAAGCAGCGTTACCTGAATGCCGCAGCCTTGAAGGATGGCAGCATCAACAAAGCCGATGCCACGCTCAAGCAAATGCTT < 2:607019/129‑1 GCCAGCCTGCGCCGGCAGCTTCTGCTGGCCCAGGACGAGGTCAAGCAGCGTTACCTGAATGCCGCAGCCTTGAAGGATGGCAGCATCAACAAAGCCGATGCCACGCTCAAGCAAATGCTTGCCAACAGCGGTTTTCTCAGCCGCCCGGCA < 1:1104045/150‑1 CAGCCTGCGCCGGCAGCTTCTGCTGGCCTAGGACGAGGTCAAGCAGCGTTACCTGAATGCCGCAGCCTTGAAGGATGGCAGCATCAACAAAGCCGATGCCACGCTCAAGCAAATGCTTGCCAACAGCGGTTTTCTCAGCCGCCCGGCAGA < 2:89058/150‑1 GTAGCCTTTGGAATCGAGCAACTCTGCCGGGCGGCTGAGAAAACCGCTGTTGGCAAGCATTTGCTTGAGCGTGGCATCGGCTTTGTTGATGCTGCCATCCTTCAAGGCTGCGGCATTCAGGTAACGCTGCTTGACCTCGTCCTGGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/158649‑158799‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcCTGCGCCGGCAGCTTCTGCTGGCCCAGGACGAGGTCAAGCAGCGTTACCTGAATGCCGCAGCCTTGAAGGATGGCAGCATCAACAAAGCCGATGCCACGCTCAAGCAAATGCTTGCCAACAGCGGTTTTCTCAGCCGCCCGGCAGA < NC_002947/158816‑158671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |