New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 242878	63 (0.860)	5 (0.070)	5/234	NT	7.2%	intergenic (+81/‑151)	PP_0190/algQ	disulfide bond formation protein B/transcriptional regulator AlgQ
	?	NC_002947	= 242890	70 (1.020)					intergenic (+93/‑139)	PP_0190/algQ	disulfide bond formation protein B/transcriptional regulator AlgQ

GCCTTCCTGCTGCTGGCGGTGCTGCCCTTGAGTTGCCTGCTGGCGTATCGTTTCCGCACCTTGGCAAGAACATGACCTGGCGCAAGGTTGTGCCATTAGCGCGACCAATGGTGATGTAACAGGGTATTAAACACTTGTATGAACTTTGTGTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/242723‑242878 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctgc‑‑‑CCTTCAAGGTACGCAGCACACAAAGTTCATACAAGTGTTTAATACCCTGTTACATCACCATTGGTCGCGCTAATGGCACAACCTTGCGCCAGGTCATGTTCTTGCCAAGGTGCGGAAACGATACGCCAGCAGGCAACTCAAGGGCAGC  <  NC_002947/242890‑242743                                                                                                                                                                                                                                                                                                                     GCCTTCCTGCTGCTGGCGGTGCTGCCCTTGAGTTGCCTGCTGGCGTATCGTTTCCGCACCTTGGCAAGAACATGACCCGGCGCAAGGTTGTGCCATTAGCGCGACCAATGGTGATGTAACAGGGTATTAAACACTTGTATGAACTTTGTG                                                                                                                                                               <  1:77709/150‑1   CTTCCTGCTGCTGGCGGTGCTGCCCTTGAGTTGCCTGCTGGCGTATCGTTTCCGCACCTTGGCAAGAACATGACCTGGCGCAAGGTTGTGCCATTAGCGCGACCAATGGTGATGTAACAGGGTATTAAACACTTGTATGAACTTTGTGTG                                                                                                                                                             >  2:1605048/1‑150       CTGCTGCTGGCGGTGCTGCCCTTGAGTTGCCTGCTGGCGTATCGTTTCCGCACCTTGGCAAGAACATGACCTGGCGCAAGGTTGTGCCATTAGCGCGACCAATGGTGATGTAACAGGGTATTAAACACTTGTATGAACTTTGTGTGCTGC                                                                                                                                                         <  2:1445428/150‑1        TGCTGCTGGCGGTGCTGCCCTTGAGTTGCCTGCTGGCGTATCGTTTCCGCACCTTGGCAAGAACATGACCTGGCGCAAGGTTGTGCCATTAGCGCGACCAATGGTGATGTAACAGGGTATTAAACACTTGTATGAACTTTGTGTGCT                                                                                                                                                           >  1:544499/1‑147        TGCTGCTGGCGGTGCTGCCCTTGAGTTGCCTGCTGGCGTATCGTTTCCGCACCTTGGCAAGAACATGACCTGGCGCAAGGTTGTGCCATTAGCGCGACCAATGGTGATGTAACAGGGTATTAAACACTTGTATGAACTTTGTGTGCT                                                                                                                                                           <  2:544499/147‑1                                   GCCTGCTGGCGTATCGTTTCCGCACCTTGGCAAGAACATGACCTGGCGCAAGGTTGTGCCATTAGCGCGACCAATGGTGATGTAACAGGGTATTAAACACTTGTATGAACTTTGTGTGCTGC‑‑‑CCTTCAAGGTACGCAGCACACAAAGTTC                                                                                                                          >  2:464740/1‑150                                                                    GAACATGACCTGGCGCAAGGTTGTGCCATTAGCGCGACCAATGGTGATGTAACAGGGTATTAAACACTTGTATGAACTTTGTGTGCTGC‑‑‑CCTTCAAGGTACGCAGCACACAAA                                                                                                                              <  2:755002/113‑1                                                                    GAACATGACCTGGCGCAAGGTTGTGCCATTAGCGCGACCAATGGTGATGTAACAGGGTATTAAACACTTGTATGAACTTTGTGTGCTGC‑‑‑CCTTCAAGGTACGCAGCACACAAA                                                                                                                              >  1:755002/1‑113                                                                         TGACCTGGCGCAAGGTTGTGCCATTAGCGCGACCAATGGTGATGTAACAGGGTATTAAACACTTGTATGAACTTTGTGTGCT                                                                                                                                                           <  2:206602/82‑1                                                                         TGACCTGGCGCAAGGTTGTGCCATTAGCGCGACCAATGGTAATGTAACAGGGTATTAAACACTTGTATGAACTTTGTGTGCT                                                                                                                                                           >  1:206602/1‑82                                                                                                                                TAAACACTTGTATGAACTTTGTGTGCTGCGTACCTTGAAGG‑‑‑GCAGCACACAAAGTTCATACAAGTGTTTAATACCCTGTTACATCACCATTGGTCGCGCTAATGGCACAACCTTGCGCCAGGTCATGTTCTTGCCAAGGTGCGGAAACGA                             >  1:464740/1‑150                                                                                                                                     ACTTGTATGAACTTTGTGTGCTGCGTACCTTGAAGG‑‑‑GCAGCACACAAAGTTCATACAAGTGTTTAATACCCTGTTACATCACCATTGGTCGCGCTAATGGCACAACCTTGCGCCAGGTCATGTTCTTGCCAAGGTGCGGAAACGATACGC                        >  1:1605048/1‑150                                                                                                                                                         CTGC‑‑‑CCTTCAAGGTACGCAGCACACAAAGTTCATACAAGTGTTTAATACCCTGTTAGATCACCATTGGTCGCGCTAATGGCACAACCTTGCGCCAGGTCATGTTCTTGCCAAGGTGCGGAAACGATACGCCAGCAGGCAACTCAAGGGCA    >  2:1252868/1‑150                                                                                                                                                         CTGC‑‑‑CCTTCAAGGTACGCAGCACACAAAGTTCATACAAGTGTTTAATACCCTGTTACATCACCATTGGTCGCGCTAATGGCACAACCTTGCGCCAGGTCATGTTCTTGCCAAGGTGCGGAAACGATACGCCAGCAGGCAACTCAAGGGCA    >  2:1319688/1‑150                                                                                                                                                           GC‑‑‑CCTTCAAGGTACGCAGCACACAAAGTTCATACAAGTGTTTAATCCCCTGTTACATCACCATTGGTCGCGC                                                                                <  2:910345/72‑1                                                                                                                                                           GC‑‑‑CCTTCAAGGTACGCAGCACACAAAGTTCATACAAGTGTTTAATACCCTGTTACATCACCATTGGTCGCGCTAATGGCACAACCTTGCGCCAGGTCATGTTCTTGCCAAGGTGCGGAAACGATACGCCAGCAGGCAACTCAAGGGCAGC  >  1:584849/1‑150                                                                                                                                                           GC‑‑‑CCTTCAAGGTACGCAGCACACAAAGTTCATACAAGTGTTTAATACCCTGTTACATCACCATTGGTCGCGC                                                                                >  1:910345/1‑72                                                                                                                                                                                                                                                                                                                     GCCTTCCTGCTGCTGGCGGTGCTGCCCTTGAGTTGCCTGCTGGCGTATCGTTTCCGCACCTTGGCAAGAACATGACCTGGCGCAAGGTTGTGCCATTAGCGCGACCAATGGTGATGTAACAGGGTATTAAACACTTGTATGAACTTTGTGTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/242723‑242878 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctgc‑‑‑CCTTCAAGGTACGCAGCACACAAAGTTCATACAAGTGTTTAATACCCTGTTACATCACCATTGGTCGCGCTAATGGCACAACCTTGCGCCAGGTCATGTTCTTGCCAAGGTGCGGAAACGATACGCCAGCAGGCAACTCAAGGGCAGC  <  NC_002947/242890‑242743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.