New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 332589 = | 95 (1.300) | 5 (0.070) | 5/238 | NT | 5.3% | coding (100/213 nt) | PP_0273 | hypothetical protein |
? | NC_002947 | 332612 = | 89 (1.270) | coding (77/213 nt) | PP_0273 | hypothetical protein |
ACGACGGGCTGGGCGAGGAGTTTACGTTCAGAACAGGCAGCCCTGAGGGAGGATGAGCATGGCCAAGAGATTCCCCACAAACCCTCGCCACCCCGAGCGAATCTGCTGGGGTTGCGACCTGTACTGCCCTGCCAAGGCGCTAGC‑CTGTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/332740‑332589 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcaGGGCAGTACAGGTCGCAACCCCAGCAGATTCGCTCGGGGTGGCGAGGGTTTGTGGGGAATCTCTTGGCCATGCTCATCCTCCCTCAGGGCTGCCTGTTCTGAACGTAAACTCCTCGCCCAGCCCGTCGTTTGACGGGCATCAATCCATT > NC_002947/332612‑332760 ACGACGGGCTGGGCGAGGAGTTTACGTTCAGAACAGGCAGCCCTGAGGGAGGATGAGCATGGCCAAGAGATTCCCCACAAACCCTCGCCACCCCGAGCGAATCTGCTGGGGTTGCGACCTGTACTGCCCTGCCAAGGCGCTAGC‑CTGTGG < 1:1527110/150‑1 GACGGGCTGGGCGAGGAGTTTACGTTCAGAACAGGCAGCCCTGAGGGAGGATGAGCATGGCCAAGAGATTCCCCACAAACCCTCGCCACCCCGAGCGAATCTGCTGGGGTTGCGACCTGTACTGCCCTGCCAAGGCGCTAGC‑CTGTGGCA > 1:631061/1‑150 AGGAGTTTACGTTCAGAACAGGCAGCCCTGAGGGAGGATGAGCATGGCCAAGAGATTCCCCACAAACCCTCGCCACCCCGAGCGAATCTGCTGGGGTTGCGACCTGTACTGCCCTGCCACAG‑GCTAGCGCCTTGGCAGGGCAGTACAGGT < 1:257607/150‑1 GCATGGCCAAGAGATTCCCCACAAACCCTCGCCACCCCGAGCGAATCTGCTGGGGTTGCGACCTGTACTGCCCTGCCAAGGCGCTAGC‑CTGT > 1:738345/1‑92 GCATGGCCAAGAGATTCCCCACAAACCCTCGCCACCCCGAGCGAATCTGCTGGGGTTGCGACCTGTACTGCCCTGCCAAGGCGCTAGC‑CTGT < 2:738345/92‑1 CCTGCCAAGGCGCTAGC‑CTGTGGCAGGGCAGTACAGGTCGCAACCCCAGCAGATTCGCTCGGGGTGGCGAGGGTTTGTGG > 1:208683/1‑80 CCTGCCAAGGCGCTAGC‑CTGTGGCAGGGCAGTACAGGTCGCAACCCCAGCAGATTCGCTCGGGGTGGCGAGGGTTTGTGG < 2:208683/80‑1 GCCAAGGCGCTAGC‑CTGTGGCAGGGCAGTACAGGTCGCAACCCCAGCAGATTCGCTCGGGGTGGCGAGGGTTTGTGGGGAATCTCTTGGCCATGCTCATCCTCCCTCAGGGCTGCCTGTTCTGAACGTAAACTCCTCGCCCAGCCCGTCG > 1:1709039/1‑150 CAAGGCGCTAGC‑CTGTGGCAGGGCAGTACAGGTCGCAACCCCAGCAGATTCGCTCGGGGTGGCGAGGGTTTGTGGGGAATCTCTTGGCCATGCTCATCCTCCCTCAGGGCTGCCTGTTCTGAACGTAAACTCCTCGCCCAGCCCGTCGTT < 2:1709039/150‑1 GC‑CTGTGGCAGGGCAGTACAGGTCGCAACCCCAGCAGATTCGCTCGGGGTGGCGAGGGTTTGTGGGGAATCTCTTGGCCATGCTCATCCTCCCTCAGGGCTGCCTGTTCTGAACGTAAACTCCTCGCCCAGCCCGTCGTTTGACGGGCAT < 2:257607/150‑1 CAGGGCAGTACAGGTCGCAACCCCAGCAGATTCGCTCGGGGTGGCGAGGGTTTGTGGGGAATCTCTTGGCCATGCTCATCCTCCCTCAGGGCTGCCTGTTCTGAACGTAAACTCCTCGCCCAGCCCGTCGTTTGACGGGCATCAATCCAT < 1:1041370/150‑1 AGGGCAGTACAGGTCGCAACCCCAGCAGATTCGCTCGGGGTGGCGAGGGTTTGTGGGGAATCTCTTGGCCATGCTCATCCTCCCTCAGGGCTGCCTGTTCTGAACGTAAACTCCTCGCCCAGCCCGTCGTTTGACGGGCATCAATCCATT > 1:864863/1‑150 AGGGCAGTACAGGTCGCAACCCCAGCAGATTCGCTCGGGGTGGCGAGGGTTTGTGGGGAATCTCTTGGCCATGCTCATCCTCCCTCAGAGCTGCCTGTTCTGAACGTAACCTCCTTGCCCATCCCGTCGTTTGACGTGCATCAATCCATT < 2:1677492/150‑1 ACGACGGGCTGGGCGAGGAGTTTACGTTCAGAACAGGCAGCCCTGAGGGAGGATGAGCATGGCCAAGAGATTCCCCACAAACCCTCGCCACCCCGAGCGAATCTGCTGGGGTTGCGACCTGTACTGCCCTGCCAAGGCGCTAGC‑CTGTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/332740‑332589 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcaGGGCAGTACAGGTCGCAACCCCAGCAGATTCGCTCGGGGTGGCGAGGGTTTGTGGGGAATCTCTTGGCCATGCTCATCCTCCCTCAGGGCTGCCTGTTCTGAACGTAAACTCCTCGCCCAGCCCGTCGTTTGACGGGCATCAATCCATT > NC_002947/332612‑332760 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |