New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 675399	95 (1.300)	7 (0.100)	5/242	NT	7.2%	coding (303/696 nt)	PP_0577	hypothetical protein
	?	NC_002947	= 675451	88 (1.240)					coding (251/696 nt)	PP_0577	hypothetical protein

TTGGCGCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/675294‑675399 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGATGCCGTCA  <  NC_002947/675451‑675392                                                                                                                                                                        TTGGCGCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCATCGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAA                  <  1:366557/150‑1    GCGCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGCCGGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTG               <  2:64991/150‑1    GCGCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTG               <  1:890883/150‑1    GCGCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTG               <  2:198992/150‑1                TTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGGGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGGC‑GCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGATGCCGTCA  <  2:748172/150‑1                                        CAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGG              >  1:938185/1‑115                                        CAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGG              <  2:938185/115‑1                                                                                                                                                                        TTGGCGCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/675294‑675399 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGATGCCGTCA  <  NC_002947/675451‑675392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.