New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 725740 | 86 (1.180) | 6 (0.080) | 6/244 | NT | 6.0% | coding (162/1203 nt) | PP_0619 | branched‑chain amino acid ABC transporter substrate‑binding protein |
? | NC_002947 | = 725787 | 105 (1.460) | coding (115/1203 nt) | PP_0619 | branched‑chain amino acid ABC transporter substrate‑binding protein |
CGATGGCTTCCTGCACCTTGCGCACCGCCTTGCCGGCGTTGCCTTCGGTGTCGATGACTTTGTACTTGAGCGGGTGGCCGAGCAACTGCGGGTGCTCGGCGATGGCCAGGCGCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/725625‑725740 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agTCCATGTCGGGCGCCTTCGCCAGCTACGGCAAGTACGCCGACATGGGCTCGCGCCTGGCCATCGCCGAGCACCCGCAGTTGCTCGGCCACCCGCTCAAGTACAAAGTCATCGACACCGAAGGCAACGCCGGCAAGGCGGTGCGCAAGGT < NC_002947/725787‑725639 CGATGGCTTCCTGCACCTTGCGCACCGCCTTGCCGGCGTTGCCTTCGGTGTCGATGACTTTGTACTTGAGCGGGTGGCCGAGCAACTGCGGGTGCTCGGCGATGGCCAGGCGCGAGTCCATGTCGGGCGCCTTCGCCAGCTACGGCAAGT > 1:1041201/1‑150 CTTGCGCACCGCCTTGCCGGCGTTGCCTTCGGTGTCGATGACTTTGTACTTGAGCGGGTGGCCGAGCAACTGCGGGTGCTCGGCGATGGCCAGGCGCGAGTCCATGTCGGGCGCCTTCGCCAGCTACGGCAAGTACGACGACATGGGCTC < 2:1041201/150‑1 GCACCGCCTTGCCGGCGTTGCCTTCGGTGTCGATGACTTTGTACTTGAGCGGGTGGCCGAGCAACTGCGGGTGCTCGGCGATGGCCAGGCGCGAGCCCATGTCGGGCGCCTTCGCCAGCTACGGCAAGTACGCCGAC > 1:170416/1‑137 GCACCGCCTTGCCGGCGTTGCCTTCGGTGTCGATGACTTTGTACTTGAGCGGGTGGCCGAGCAACTGCGGGTGCTCGGCGATGGCCAGGCGCGAGCCCATGTCGGGCGCCTTCGCCAGCTACGGCAAGTACGCCGAC < 2:170416/137‑1 CACCGCCTTGCCGGCGTTGCCTTCGGTGTCGATGACTTTGTACTTGAGCGGGTGGCCGAGCAACTGCGGGTGCTCGGCGATGGCCAGGCGCGAGTCCATGTCGGGCGCCTTCGCCAGCTACGGCAAGTACGCCGACAT > 1:1724662/1‑138 CACCGCCTTGCCGGCGTTGCCTTCGGTGTCGATGACTTTGTACTTGAGCGGGTGGCCGAGCAACTGCGGGTGCTCGGCGATGGCCAGGCGCGAGTCCATGTCGGGCGCCTTCGCCAGCTACGGCAAGTACGCCGACAT < 2:1724662/138‑1 AGTCCATGTCGGGCGCCTTCGCCAGCTACGGCAAGTACGCCGACATGGGCTCGCGCCTGGCCATCGCCGAGCACCCGCAGTTGCTCGGCCACCCGCTCAAGTACAAAGTCATCGACACCGAAGGCAACGCCGGCAAGGCGGTGCGCAAGG < 1:607231/150‑1 AGTCCATGTCGGGCGCCTTCGCCAGCTACGGCAAGTACGCCGACATGGGCTCGCGCCTGGCCATCGCCGAGCACCCGCAGTTGCTCGGCCACCCGCTCAAGTACAAAGTCATCGACACCGAAGGCAACGCCGGCAAGGCGGTGCGCAAGG < 1:975893/150‑1 GTCCATGTCGGGCGCCTTCGCCAGCTACGGCAAGTACGCCGACATGGGCTCGCGCCTGGCCATCGCCGAGCACCCGCAGTTGCTCGGCCACCCGCTCAAGTACAAAGTCATCGACACCGAAGGCAACGCCGGCAAGGCGGTGCGCAAGGT > 1:153693/1‑150 CGATGGCTTCCTGCACCTTGCGCACCGCCTTGCCGGCGTTGCCTTCGGTGTCGATGACTTTGTACTTGAGCGGGTGGCCGAGCAACTGCGGGTGCTCGGCGATGGCCAGGCGCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/725625‑725740 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agTCCATGTCGGGCGCCTTCGCCAGCTACGGCAAGTACGCCGACATGGGCTCGCGCCTGGCCATCGCCGAGCACCCGCAGTTGCTCGGCCACCCGCTCAAGTACAAAGTCATCGACACCGAAGGCAACGCCGGCAAGGCGGTGCGCAAGGT < NC_002947/725787‑725639 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |